RNA–Protein interactions for RNA: ENST00000295400.10

TGFA-201, Transcript of transforming growth factor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFA, Length 4,310 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-201ENST00000295400 MMRN2Q9H8L6 949 aa13.19□□□□□ -0.3
TGFA-201ENST00000295400 ODF2Q5BJF6 829 aa13.18□□□□□ -0.3
TGFA-201ENST00000295400 ERO1AQ96HE7 468 aa13.18□□□□□ -0.3
TGFA-201ENST00000295400 HINFPQ9BQA5 517 aa13.18□□□□□ -0.3
TGFA-201ENST00000295400 NAPAP54920 295 aa13.18□□□□□ -0.3
TGFA-201ENST00000295400 EIF6P56537 245 aaKnown RBP13.18□□□□□ -0.3
TGFA-201ENST00000295400 CCDC40Q4G0X9 1142 aa13.18□□□□□ -0.3
TGFA-201ENST00000295400 RILPL1Q5EBL4 403 aa13.18□□□□□ -0.3
TGFA-201ENST00000295400 RPGRQ92834 1020 aaKnown RBP13.18□□□□□ -0.3
TGFA-201ENST00000295400 SETDB2Q96T68 719 aa13.18□□□□□ -0.3
TGFA-201ENST00000295400 OGFRQ9NZT2 677 aa13.18□□□□□ -0.3
TGFA-201ENST00000295400 PCDHA5Q9Y5H7 936 aa13.18□□□□□ -0.3
TGFA-201ENST00000295400 WWC3Q9ULE0 1092 aa13.18□□□□□ -0.3
TGFA-201ENST00000295400 GOLGA6L9A6NEM1 432 aa13.17□□□□□ -0.3
TGFA-201ENST00000295400 ATP1A3P13637 1013 aa13.17□□□□□ -0.3
TGFA-201ENST00000295400 LPIN2Q92539 896 aa13.17□□□□□ -0.3
TGFA-201ENST00000295400 PPP1R1BQ9UD71 204 aaPredicted RBP13.17□□□□□ -0.3
TGFA-201ENST00000295400 SETQ01105 290 aaPredicted RBP13.17□□□□□ -0.3
TGFA-201ENST00000295400 POSTNQ15063 836 aa13.17□□□□□ -0.3
TGFA-201ENST00000295400 IFNL3Q8IZI9 196 aa13.17□□□□□ -0.3
TGFA-201ENST00000295400 EXOC1Q9NV70 894 aa13.17□□□□□ -0.3
TGFA-201ENST00000295400 TAB2Q9NYJ8 693 aa13.17□□□□□ -0.3
TGFA-201ENST00000295400 A0A0G2JLW4 131 aa13.17□□□□□ -0.3
TGFA-201ENST00000295400 CTAGE15A4D2H0 777 aa13.17□□□□□ -0.3
TGFA-201ENST00000295400 CTAGE8P0CG41 777 aa13.17□□□□□ -0.3
TGFA-201ENST00000295400 LETM2Q2VYF4 491 aa13.17□□□□□ -0.3
TGFA-201ENST00000295400 CTAGE6Q86UF2 777 aa13.17□□□□□ -0.3
TGFA-201ENST00000295400 CTAGE4Q8IX94 777 aa13.17□□□□□ -0.3
TGFA-201ENST00000295400 CALML4Q96GE6 196 aa13.17□□□□□ -0.3
TGFA-201ENST00000295400 GDAP1L1Q96MZ0 367 aa13.17□□□□□ -0.3
TGFA-201ENST00000295400 SEC31BQ9NQW1 1179 aa13.17□□□□□ -0.3
TGFA-201ENST00000295400 AKR1B15C9JRZ8 316 aaPredicted RBP13.17□□□□□ -0.3
TGFA-201ENST00000295400 DEXIO95424 95 aa13.17□□□□□ -0.3
TGFA-201ENST00000295400 AKNAD1Q5T1N1 836 aa13.17□□□□□ -0.3
TGFA-201ENST00000295400 TDRD7Q8NHU6 1098 aaKnown RBP13.17□□□□□ -0.3
TGFA-201ENST00000295400 ZBTB1Q9Y2K1 713 aa13.17□□□□□ -0.3
TGFA-201ENST00000295400 CARMIL3Q8ND23 1372 aa13.16□□□□□ -0.3
TGFA-201ENST00000295400 CUTAO60888 179 aa13.16□□□□□ -0.3
TGFA-201ENST00000295400 NR5A1Q13285 461 aa13.16□□□□□ -0.3
TGFA-201ENST00000295400 SMYD4Q8IYR2 804 aaPredicted RBP13.16□□□□□ -0.3
TGFA-201ENST00000295400 IQUBQ8NA54 791 aa13.16□□□□□ -0.3
TGFA-201ENST00000295400 BAG3O95817 575 aa13.16□□□□□ -0.3
TGFA-201ENST00000295400 CTSWP56202 376 aa13.16□□□□□ -0.3
TGFA-201ENST00000295400 PPP2R3AQ06190 1150 aa13.16□□□□□ -0.3
TGFA-201ENST00000295400 DNAJC21Q5F1R6 531 aaKnown RBP13.16□□□□□ -0.3
TGFA-201ENST00000295400 PSMB7Q99436 277 aa13.16□□□□□ -0.3
TGFA-201ENST00000295400 FAM107BQ9H098 131 aa13.16□□□□□ -0.3
TGFA-201ENST00000295400 RCOR1Q9UKL0 485 aa13.16□□□□□ -0.3
TGFA-201ENST00000295400 USP17L12C9JPN9 530 aa13.16□□□□□ -0.3
TGFA-201ENST00000295400 USP17L21D6R901 530 aa13.16□□□□□ -0.3
TGFA-201ENST00000295400 CCDC144BQ3MJ40 725 aa13.16□□□□□ -0.3
TGFA-201ENST00000295400 LAMC1P11047 1609 aa13.16□□□□□ -0.3
TGFA-201ENST00000295400 MACROD2A1Z1Q3 448 aa13.15□□□□□ -0.3
TGFA-201ENST00000295400 CTAGE9A4FU28 777 aa13.15□□□□□ -0.3
TGFA-201ENST00000295400 RFC4P35249 363 aa13.15□□□□□ -0.3
TGFA-201ENST00000295400 NOP2P46087 812 aaKnown RBP13.15□□□□□ -0.3
TGFA-201ENST00000295400 TAF4BQ92750 862 aa13.15□□□□□ -0.3
TGFA-201ENST00000295400 ZNF287Q9HBT7 754 aa13.15□□□□□ -0.3
TGFA-201ENST00000295400 LUC7LQ9NQ29 371 aaKnown RBP13.15□□□□□ -0.3
TGFA-201ENST00000295400 PSMA7O14818 248 aa13.15□□□□□ -0.3
TGFA-201ENST00000295400 CDC25AP30304 524 aa13.15□□□□□ -0.3
TGFA-201ENST00000295400 TMEM266Q2M3C6 531 aa13.15□□□□□ -0.3
TGFA-201ENST00000295400 ZNF654Q8IZM8 581 aa13.15□□□□□ -0.3
TGFA-201ENST00000295400 LINC00301Q8NCQ3 95 aa13.15□□□□□ -0.3
TGFA-201ENST00000295400 GBP3Q9H0R5 595 aa13.15□□□□□ -0.3
TGFA-201ENST00000295400 GOLPH3LQ9H4A5 285 aa13.15□□□□□ -0.3
TGFA-201ENST00000295400 RABEP2Q9H5N1 569 aa13.15□□□□□ -0.3
TGFA-201ENST00000295400 BCCIPQ9P287 314 aaKnown RBP eCLIP13.15□□□□□ -0.3
TGFA-201ENST00000295400 USO1O60763 962 aaKnown RBP13.15□□□□□ -0.3
TGFA-201ENST00000295400 GNAT2P19087 354 aa13.15□□□□□ -0.3
TGFA-201ENST00000295400 TNNI2P48788 182 aa13.15□□□□□ -0.3
TGFA-201ENST00000295400 HLTFQ14527 1009 aaKnown RBP eCLIP13.15□□□□□ -0.3
TGFA-201ENST00000295400 APOA5Q6Q788 366 aa13.15□□□□□ -0.3
TGFA-201ENST00000295400 STOX1Q6ZVD7 989 aa13.15□□□□□ -0.3
TGFA-201ENST00000295400 TAX1BP1Q86VP1 789 aa13.15□□□□□ -0.3
TGFA-201ENST00000295400 SMARCC1Q92922 1105 aaPredicted RBP13.15□□□□□ -0.3
TGFA-201ENST00000295400 MYO3AQ8NEV4 1616 aa13.15□□□□□ -0.3
TGFA-201ENST00000295400 PAFAH1B1P43034 410 aa13.15□□□□□ -0.31
TGFA-201ENST00000295400 DTHD1Q6ZMT9 781 aa13.15□□□□□ -0.31
TGFA-201ENST00000295400 GOLGA1Q92805 767 aa13.15□□□□□ -0.31
TGFA-201ENST00000295400 VPS18Q9P253 973 aa13.15□□□□□ -0.31
TGFA-201ENST00000295400 RPAP1Q9BWH6 1393 aaPredicted RBP13.14□□□□□ -0.31
TGFA-201ENST00000295400 TMCO5BA8MYB1 307 aa13.14□□□□□ -0.31
TGFA-201ENST00000295400 NOSTRINQ8IVI9 506 aa13.14□□□□□ -0.31
TGFA-201ENST00000295400 ZBTB38Q8NAP3 1195 aaPredicted RBP13.14□□□□□ -0.31
TGFA-201ENST00000295400 FEZ1Q99689 392 aa13.14□□□□□ -0.31
TGFA-201ENST00000295400 SLF1Q9BQI6 1058 aa13.14□□□□□ -0.31
TGFA-201ENST00000295400 PLEKHA4Q9H4M7 779 aa13.14□□□□□ -0.31
TGFA-201ENST00000295400 CYP2D7A0A087X1C5 515 aa13.14□□□□□ -0.31
TGFA-201ENST00000295400 RIMBP2O15034 1052 aa13.14□□□□□ -0.31
TGFA-201ENST00000295400 CTR9Q6PD62 1173 aa13.14□□□□□ -0.31
TGFA-201ENST00000295400 CTAGE1Q96RT6 745 aa13.14□□□□□ -0.31
TGFA-201ENST00000295400 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.14□□□□□ -0.31
TGFA-201ENST00000295400 IQGAP1P46940 1657 aa13.14□□□□□ -0.31
TGFA-201ENST00000295400 GOLGA6L10A6NI86 522 aa13.14□□□□□ -0.31
TGFA-201ENST00000295400 CMA1P23946 247 aa13.14□□□□□ -0.31
TGFA-201ENST00000295400 RNASE9P60153 205 aaKnown RBP13.14□□□□□ -0.31
TGFA-201ENST00000295400 TTC38Q5R3I4 469 aa13.14□□□□□ -0.31
TGFA-201ENST00000295400 SMAP1Q8IYB5 467 aaPredicted RBP13.14□□□□□ -0.31
TGFA-201ENST00000295400 MRFAP1L1Q96HT8 127 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms