RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 FPGT-TNNI3KV9GXZ4 949 aa21.01■□□□□ 0.95
HOXC6-201ENST00000243108 RPAP1Q9BWH6 1393 aaPredicted RBP21■□□□□ 0.95
HOXC6-201ENST00000243108 MAP3K9P80192 1104 aa21■□□□□ 0.95
HOXC6-201ENST00000243108 ZGPATQ8N5A5 531 aaKnown RBP21■□□□□ 0.95
HOXC6-201ENST00000243108 SPATA5Q8NB90 893 aa21■□□□□ 0.95
HOXC6-201ENST00000243108 OPTNQ96CV9 577 aa21■□□□□ 0.95
HOXC6-201ENST00000243108 DBNDD2Q9BQY9 259 aa21■□□□□ 0.95
HOXC6-201ENST00000243108 BCL11AQ9H165 835 aa21■□□□□ 0.95
HOXC6-201ENST00000243108 MANSC4A6NHS7 340 aaPredicted RBP20.99■□□□□ 0.95
HOXC6-201ENST00000243108 GORABQ5T7V8 394 aa20.99■□□□□ 0.95
HOXC6-201ENST00000243108 MIGA2Q7L4E1 593 aa20.99■□□□□ 0.95
HOXC6-201ENST00000243108 IFNL1Q8IU54 200 aa20.99■□□□□ 0.95
HOXC6-201ENST00000243108 FAM151AQ8WW52 585 aa20.99■□□□□ 0.95
HOXC6-201ENST00000243108 PTPN18Q99952 460 aa20.99■□□□□ 0.95
HOXC6-201ENST00000243108 GPR108Q9NPR9 543 aa20.99■□□□□ 0.95
HOXC6-201ENST00000243108 MECOMQ03112 1051 aa20.98■□□□□ 0.95
HOXC6-201ENST00000243108 DZIP1Q86YF9 867 aaKnown RBP20.98■□□□□ 0.95
HOXC6-201ENST00000243108 ZNF296Q8WUU4 475 aaPredicted RBP20.98■□□□□ 0.95
HOXC6-201ENST00000243108 FAM163AQ96GL9 167 aaPredicted RBP20.98■□□□□ 0.95
HOXC6-201ENST00000243108 DAXXQ9UER7 740 aaPredicted RBP20.98■□□□□ 0.95
HOXC6-201ENST00000243108 HTTP42858 3142 aa20.98■□□□□ 0.95
HOXC6-201ENST00000243108 RFX7Q2KHR2 1363 aa20.98■□□□□ 0.95
HOXC6-201ENST00000243108 OS9Q13438 667 aaPredicted RBP20.98■□□□□ 0.95
HOXC6-201ENST00000243108 ZKSCAN4Q969J2 545 aaPredicted RBP20.98■□□□□ 0.95
HOXC6-201ENST00000243108 MS4A4AQ96JQ5 239 aa20.98■□□□□ 0.95
HOXC6-201ENST00000243108 CFHR5Q9BXR6 569 aa20.98■□□□□ 0.95
HOXC6-201ENST00000243108 IL1RAPL2Q9NP60 686 aa20.98■□□□□ 0.95
HOXC6-201ENST00000243108 SNCAIPQ9Y6H5 919 aa20.98■□□□□ 0.95
HOXC6-201ENST00000243108 BECN1Q14457 450 aa20.97■□□□□ 0.95
HOXC6-201ENST00000243108 ERC1Q8IUD2 1116 aa20.97■□□□□ 0.95
HOXC6-201ENST00000243108 TLR7Q9NYK1 1049 aaKnown RBP20.97■□□□□ 0.95
HOXC6-201ENST00000243108 DOCK2Q92608 1830 aa20.97■□□□□ 0.95
HOXC6-201ENST00000243108 GPR25O00155 361 aa20.96■□□□□ 0.95
HOXC6-201ENST00000243108 INHBEP58166 350 aa20.96■□□□□ 0.95
HOXC6-201ENST00000243108 NSUN4Q96CB9 384 aaKnown RBP20.96■□□□□ 0.95
HOXC6-201ENST00000243108 WRNIP1Q96S55 665 aa20.96■□□□□ 0.95
HOXC6-201ENST00000243108 SNRKQ9NRH2 765 aa20.96■□□□□ 0.95
HOXC6-201ENST00000243108 DBNLQ9UJU6 430 aaKnown RBP20.96■□□□□ 0.95
HOXC6-201ENST00000243108 MROH7-TTC4A0A0A0MT08 1334 aa20.96■□□□□ 0.95
HOXC6-201ENST00000243108 CENPFP49454 3210 aa20.95■□□□□ 0.95
HOXC6-201ENST00000243108 TESPA1A2RU30 521 aaPredicted RBP20.95■□□□□ 0.94
HOXC6-201ENST00000243108 SLC4A3P48751 1232 aa20.95■□□□□ 0.94
HOXC6-201ENST00000243108 SPTY2D1Q68D10 685 aaPredicted RBP20.95■□□□□ 0.94
HOXC6-201ENST00000243108 SH3BP5LQ7L8J4 393 aa20.95■□□□□ 0.94
HOXC6-201ENST00000243108 EAF2Q96CJ1 260 aaPredicted RBP20.95■□□□□ 0.94
HOXC6-201ENST00000243108 IDI2Q9BXS1 227 aa20.95■□□□□ 0.94
HOXC6-201ENST00000243108 DDX4Q9NQI0 724 aaKnown RBP20.95■□□□□ 0.94
HOXC6-201ENST00000243108 WDHD1O75717 1129 aaPredicted RBP20.95■□□□□ 0.94
HOXC6-201ENST00000243108 UQCRFS1P1P0C7P4 283 aa20.95■□□□□ 0.94
HOXC6-201ENST00000243108 SLURP2P0DP57 97 aa20.95■□□□□ 0.94
HOXC6-201ENST00000243108 INPP5BP32019 993 aa20.95■□□□□ 0.94
HOXC6-201ENST00000243108 BTDP43251 543 aa20.95■□□□□ 0.94
HOXC6-201ENST00000243108 RHBDL3P58872 404 aa20.95■□□□□ 0.94
HOXC6-201ENST00000243108 CCDC8Q9H0W5 538 aaPredicted RBP20.95■□□□□ 0.94
HOXC6-201ENST00000243108 CSADQ9Y600 493 aa20.95■□□□□ 0.94
HOXC6-201ENST00000243108 ATRNL1Q5VV63 1379 aa20.95■□□□□ 0.94
HOXC6-201ENST00000243108 GPR75-ASB3A0A0A6YYF3 556 aa20.94■□□□□ 0.94
HOXC6-201ENST00000243108 TSHZ3Q63HK5 1081 aa20.94■□□□□ 0.94
HOXC6-201ENST00000243108 CASC1Q6TDU7 716 aa20.94■□□□□ 0.94
HOXC6-201ENST00000243108 OTUD5Q96G74 571 aa20.94■□□□□ 0.94
HOXC6-201ENST00000243108 SPDYE5A6NIY4 337 aa20.93■□□□□ 0.94
HOXC6-201ENST00000243108 NOM1Q5C9Z4 860 aaKnown RBP20.93■□□□□ 0.94
HOXC6-201ENST00000243108 BRI3BPQ8WY22 251 aa20.93■□□□□ 0.94
HOXC6-201ENST00000243108 ZNF341Q9BYN7 854 aa20.93■□□□□ 0.94
HOXC6-201ENST00000243108 ZNF112Q9UJU3 913 aa20.93■□□□□ 0.94
HOXC6-201ENST00000243108 CCDC85CA6NKD9 419 aa20.92■□□□□ 0.94
HOXC6-201ENST00000243108 CYP2E1P05181 493 aaPredicted RBP20.92■□□□□ 0.94
HOXC6-201ENST00000243108 TTC39AQ5SRH9 613 aa20.92■□□□□ 0.94
HOXC6-201ENST00000243108 DCAF15Q66K64 600 aa20.92■□□□□ 0.94
HOXC6-201ENST00000243108 MAST2Q6P0Q8 1798 aa20.92■□□□□ 0.94
HOXC6-201ENST00000243108 DDTLA6NHG4 134 aaPredicted RBP20.92■□□□□ 0.94
HOXC6-201ENST00000243108 ALDH1A1P00352 501 aa20.92■□□□□ 0.94
HOXC6-201ENST00000243108 CTU1Q7Z7A3 348 aaKnown RBP20.92■□□□□ 0.94
HOXC6-201ENST00000243108 SLF2Q8IX21 1173 aa20.92■□□□□ 0.94
HOXC6-201ENST00000243108 PI4K2BQ8TCG2 481 aa20.92■□□□□ 0.94
HOXC6-201ENST00000243108 HOOK2Q96ED9 719 aa20.92■□□□□ 0.94
HOXC6-201ENST00000243108 RAI14Q9P0K7 980 aa20.92■□□□□ 0.94
HOXC6-201ENST00000243108 CDK5RAP2Q96SN8 1893 aa20.91■□□□□ 0.94
HOXC6-201ENST00000243108 TTC41PQ6P2S7 1318 aa20.91■□□□□ 0.94
HOXC6-201ENST00000243108 ENTPD3O75355 529 aa20.91■□□□□ 0.94
HOXC6-201ENST00000243108 CRHR2Q13324 411 aa20.91■□□□□ 0.94
HOXC6-201ENST00000243108 CCDC158Q5M9N0 1113 aa20.91■□□□□ 0.94
HOXC6-201ENST00000243108 CLASRPQ8N2M8 674 aaKnown RBP20.91■□□□□ 0.94
HOXC6-201ENST00000243108 ZNF512BQ96KM6 892 aaPredicted RBP20.91■□□□□ 0.94
HOXC6-201ENST00000243108 IRF6O14896 467 aa20.9■□□□□ 0.94
HOXC6-201ENST00000243108 ERO1BQ86YB8 467 aa20.9■□□□□ 0.94
HOXC6-201ENST00000243108 KIF2CQ99661 725 aa20.9■□□□□ 0.94
HOXC6-201ENST00000243108 TBC1D2Q9BYX2 928 aa20.9■□□□□ 0.94
HOXC6-201ENST00000243108 CCL15-CCL14A0A0B4J2E2 113 aa20.9■□□□□ 0.94
HOXC6-201ENST00000243108 PHF20L1A8MW92 1017 aa20.9■□□□□ 0.94
HOXC6-201ENST00000243108 ZAP70P43403 619 aa20.9■□□□□ 0.94
HOXC6-201ENST00000243108 PICALMQ13492 652 aa20.9■□□□□ 0.94
HOXC6-201ENST00000243108 CCL15Q16663 113 aa20.9■□□□□ 0.94
HOXC6-201ENST00000243108 ADGRA1Q86SQ6 560 aa20.9■□□□□ 0.94
HOXC6-201ENST00000243108 PIH1D3Q9NQM4 214 aaKnown RBP20.9■□□□□ 0.94
HOXC6-201ENST00000243108 LRP2BPQ9P2M1 347 aa20.9■□□□□ 0.94
HOXC6-201ENST00000243108 GTF2A2P52657 109 aa20.89■□□□□ 0.93
HOXC6-201ENST00000243108 CAP1Q01518 475 aa20.89■□□□□ 0.93
HOXC6-201ENST00000243108 FAM43AQ8N2R8 423 aa20.89■□□□□ 0.93
HOXC6-201ENST00000243108 NDUFB9Q9Y6M9 179 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms