RNA–Protein interactions for RNA: ENST00000638914.1

PAX6-245, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 7,300 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-245ENST00000638914 EEA1Q15075 1411 aa15.69■□□□□ 0.1
PAX6-245ENST00000638914 ANP32AP39687 249 aaKnown RBP15.69■□□□□ 0.1
PAX6-245ENST00000638914 CFAP53Q96M91 514 aa15.66■□□□□ 0.1
PAX6-245ENST00000638914 KIF27Q86VH2 1401 aa15.65■□□□□ 0.1
PAX6-245ENST00000638914 CDK11BP21127 795 aaKnown RBP15.62■□□□□ 0.09
PAX6-245ENST00000638914 PLEKHG5O94827 1062 aa15.61■□□□□ 0.09
PAX6-245ENST00000638914 CLIP1P30622 1438 aa15.61■□□□□ 0.09
PAX6-245ENST00000638914 LMOD2Q6P5Q4 547 aa15.59■□□□□ 0.09
PAX6-245ENST00000638914 POGKQ9P215 609 aa15.59■□□□□ 0.09
PAX6-245ENST00000638914 NPHP1O15259 732 aa15.58■□□□□ 0.08
PAX6-245ENST00000638914 EIF4G2P78344 907 aaKnown RBP eCLIP15.58■□□□□ 0.08
PAX6-245ENST00000638914 HNRNPUQ00839 825 aaKnown RBP eCLIP15.56■□□□□ 0.08
PAX6-245ENST00000638914 FAM9BQ8IZU0 186 aa15.56■□□□□ 0.08
PAX6-245ENST00000638914 ARXQ96QS3 562 aa15.56■□□□□ 0.08
PAX6-245ENST00000638914 KANK1Q14678 1352 aa15.56■□□□□ 0.08
PAX6-245ENST00000638914 RRP7BPQ9NSQ0 103 aa15.55■□□□□ 0.08
PAX6-245ENST00000638914 EIF5BO60841 1220 aaKnown RBP15.53■□□□□ 0.08
PAX6-245ENST00000638914 RGL3Q3MIN7 710 aa15.53■□□□□ 0.08
PAX6-245ENST00000638914 WRNQ14191 1432 aaPredicted RBP eCLIP15.52■□□□□ 0.08
PAX6-245ENST00000638914 NUDCQ9Y266 331 aa15.52■□□□□ 0.07
PAX6-245ENST00000638914 DDX10Q13206 875 aaKnown RBP15.51■□□□□ 0.07
PAX6-245ENST00000638914 SALL2Q9Y467 1007 aaPredicted RBP15.51■□□□□ 0.07
PAX6-245ENST00000638914 KNSTRNQ9Y448 316 aa15.51■□□□□ 0.07
PAX6-245ENST00000638914 MRS2Q9HD23 443 aa15.49■□□□□ 0.07
PAX6-245ENST00000638914 GOLGA3Q08378 1498 aa15.48■□□□□ 0.07
PAX6-245ENST00000638914 PNNQ9H307 717 aaKnown RBP15.48■□□□□ 0.07
PAX6-245ENST00000638914 PDS5BQ9NTI5 1447 aa15.47■□□□□ 0.07
PAX6-245ENST00000638914 CARMIL2Q6F5E8 1435 aa15.46■□□□□ 0.07
PAX6-245ENST00000638914 SENP3Q9H4L4 574 aaPredicted RBP15.45■□□□□ 0.06
PAX6-245ENST00000638914 PPM1GO15355 546 aaPredicted RBP15.45■□□□□ 0.06
PAX6-245ENST00000638914 MAPK8IP3Q9UPT6 1336 aa15.44■□□□□ 0.06
PAX6-245ENST00000638914 CHMP4BQ9H444 224 aaKnown RBP15.44■□□□□ 0.06
PAX6-245ENST00000638914 CCNB3Q8WWL7 1395 aa15.43■□□□□ 0.06
PAX6-245ENST00000638914 CCDC136Q96JN2 1154 aa15.43■□□□□ 0.06
PAX6-245ENST00000638914 FHAD1B1AJZ9 1412 aa15.43■□□□□ 0.06
PAX6-245ENST00000638914 MLECQ14165 292 aa15.43■□□□□ 0.06
PAX6-245ENST00000638914 BAZ1AQ9NRL2 1556 aaPredicted RBP15.43■□□□□ 0.06
PAX6-245ENST00000638914 CARD11Q9BXL7 1154 aa15.38■□□□□ 0.05
PAX6-245ENST00000638914 GTF3C3Q9Y5Q9 886 aa15.38■□□□□ 0.05
PAX6-245ENST00000638914 CEP164Q9UPV0 1460 aa15.38■□□□□ 0.05
PAX6-245ENST00000638914 GOLGA2Q08379 1002 aa15.37■□□□□ 0.05
PAX6-245ENST00000638914 CASC1Q6TDU7 716 aa15.36■□□□□ 0.05
PAX6-245ENST00000638914 EFCAB2Q5VUJ9 269 aa15.35■□□□□ 0.05
PAX6-245ENST00000638914 CHMP4AQ9BY43 222 aa15.34■□□□□ 0.05
PAX6-245ENST00000638914 NCLP19338 710 aaKnown RBP15.33■□□□□ 0.05
PAX6-245ENST00000638914 MS4A1P11836 297 aa15.33■□□□□ 0.04
PAX6-245ENST00000638914 CARMIL1Q5VZK9 1371 aa15.32■□□□□ 0.04
PAX6-245ENST00000638914 GGT6Q6P531 493 aa15.31■□□□□ 0.04
PAX6-245ENST00000638914 FTSJ3Q8IY81 847 aaKnown RBP15.31■□□□□ 0.04
PAX6-245ENST00000638914 ZRSR1Q15695 479 aaKnown RBP15.31■□□□□ 0.04
PAX6-245ENST00000638914 TMX4Q9H1E5 349 aaPredicted RBP15.31■□□□□ 0.04
PAX6-245ENST00000638914 EID1Q9Y6B2 187 aa15.3■□□□□ 0.04
PAX6-245ENST00000638914 DCAF1Q9Y4B6 1507 aa15.3■□□□□ 0.04
PAX6-245ENST00000638914 FKBP8Q14318 412 aa15.29■□□□□ 0.04
PAX6-245ENST00000638914 EIF4G1Q04637 1599 aaKnown RBP15.29■□□□□ 0.04
PAX6-245ENST00000638914 SRPK2P78362 688 aaKnown RBP15.28■□□□□ 0.04
PAX6-245ENST00000638914 CUX2O14529 1486 aa15.27■□□□□ 0.04
PAX6-245ENST00000638914 TMF1P82094 1093 aa15.27■□□□□ 0.04
PAX6-245ENST00000638914 SMARCA2P51531 1590 aa15.26■□□□□ 0.03
PAX6-245ENST00000638914 BECN1Q14457 450 aa15.26■□□□□ 0.03
PAX6-245ENST00000638914 CEP162Q5TB80 1403 aa15.25■□□□□ 0.03
PAX6-245ENST00000638914 GOLGA6L22H0YM25 854 aa15.25■□□□□ 0.03
PAX6-245ENST00000638914 LAS1LQ9Y4W2 734 aaKnown RBP15.24■□□□□ 0.03
PAX6-245ENST00000638914 OS9Q13438 667 aaPredicted RBP15.24■□□□□ 0.03
PAX6-245ENST00000638914 ANP32EQ9BTT0 268 aa15.24■□□□□ 0.03
PAX6-245ENST00000638914 TNIKQ9UKE5 1360 aa15.24■□□□□ 0.03
PAX6-245ENST00000638914 HDGFL2Q7Z4V5 671 aaPredicted RBP15.24■□□□□ 0.03
PAX6-245ENST00000638914 AEBP2Q6ZN18 517 aaPredicted RBP15.23■□□□□ 0.03
PAX6-245ENST00000638914 RSPH4AQ5TD94 716 aa15.23■□□□□ 0.03
PAX6-245ENST00000638914 U2SURPO15042 1029 aaKnown RBP15.22■□□□□ 0.03
PAX6-245ENST00000638914 RTF1Q92541 710 aaKnown RBP15.22■□□□□ 0.03
PAX6-245ENST00000638914 CSB-PGBD3P0DP91 1061 aa15.21■□□□□ 0.03
PAX6-245ENST00000638914 FGD1P98174 961 aa15.19■□□□□ 0.02
PAX6-245ENST00000638914 CCDC9Q9Y3X0 531 aaKnown RBP15.18■□□□□ 0.02
PAX6-245ENST00000638914 SOGA1O94964 1423 aa15.18■□□□□ 0.02
PAX6-245ENST00000638914 CECR2Q9BXF3 1484 aa15.18■□□□□ 0.02
PAX6-245ENST00000638914 DCAF11Q8TEB1 546 aa15.17■□□□□ 0.02
PAX6-245ENST00000638914 PAK3O75914 559 aaPredicted RBP15.17■□□□□ 0.02
PAX6-245ENST00000638914 NEUROD2Q15784 382 aa15.17■□□□□ 0.02
PAX6-245ENST00000638914 CALD1Q05682 793 aaKnown RBP15.16■□□□□ 0.02
PAX6-245ENST00000638914 HDAC5Q9UQL6 1122 aa15.15■□□□□ 0.02
PAX6-245ENST00000638914 KCNJ4P48050 445 aa15.15■□□□□ 0.02
PAX6-245ENST00000638914 SOX12O15370 315 aa15.13■□□□□ 0.01
PAX6-245ENST00000638914 DDRGK1Q96HY6 314 aa15.13■□□□□ 0.01
PAX6-245ENST00000638914 CFAP44Q96MT7 982 aa15.13■□□□□ 0.01
PAX6-245ENST00000638914 MORC1Q86VD1 984 aa15.13■□□□□ 0.01
PAX6-245ENST00000638914 TIMELESSQ9UNS1 1208 aa15.13■□□□□ 0.01
PAX6-245ENST00000638914 OSCARQ8IYS5 282 aa15.13■□□□□ 0.01
PAX6-245ENST00000638914 TNNT2P45379 298 aaPredicted RBP15.13■□□□□ 0.01
PAX6-245ENST00000638914 FMN1Q68DA7 1419 aa15.13■□□□□ 0.01
PAX6-245ENST00000638914 STK26Q9P289 416 aa15.11■□□□□ 0.01
PAX6-245ENST00000638914 HIRIP3Q9BW71 556 aaPredicted RBP15.11■□□□□ 0.01
PAX6-245ENST00000638914 SPAG9O60271 1321 aaKnown RBP15.09■□□□□ 0.01
PAX6-245ENST00000638914 WASHC2CQ9Y4E1 1318 aa15.09■□□□□ 0.01
PAX6-245ENST00000638914 ANKRD30AQ9BXX3 1397 aa15.09■□□□□ 0.01
PAX6-245ENST00000638914 KIF3BO15066 747 aa15.08■□□□□ 0.01
PAX6-245ENST00000638914 SAFB2Q14151 953 aaKnown RBP eCLIP15.08■□□□□ 0
PAX6-245ENST00000638914 TULP1O00294 542 aaPredicted RBP15.07■□□□□ 0
PAX6-245ENST00000638914 TDRD9Q8NDG6 1382 aaKnown RBP15.07■□□□□ 0
PAX6-245ENST00000638914 TERF2IPQ9NYB0 399 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms