RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-223	ENST00000637293	SHROOM4	Q9ULL8	1493 aa		4.23	□□□□□ -1.73
GABRB3-223	ENST00000637293	MSH5	O43196	834 aa		4.22	□□□□□ -1.73
GABRB3-223	ENST00000637293	RYDEN	Q9NUL5	291 aa	Known RBP	4.21	□□□□□ -1.74
GABRB3-223	ENST00000637293	DMRT2	Q9Y5R5	561 aa		4.21	□□□□□ -1.74
GABRB3-223	ENST00000637293	EIF5B	O60841	1220 aa	Known RBP	4.2	□□□□□ -1.74
GABRB3-223	ENST00000637293	ARID3A	Q99856	593 aa		4.2	□□□□□ -1.74
GABRB3-223	ENST00000637293	STAG3	Q9UJ98	1225 aa		4.2	□□□□□ -1.74
GABRB3-223	ENST00000637293	PLCD3	Q8N3E9	789 aa		4.19	□□□□□ -1.74
GABRB3-223	ENST00000637293	CIZ1	Q9ULV3	898 aa	Predicted RBP	4.18	□□□□□ -1.74
GABRB3-223	ENST00000637293	GTPBP6	O43824	516 aa	Predicted RBP	4.17	□□□□□ -1.74
GABRB3-223	ENST00000637293	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
GABRB3-223	ENST00000637293	WDR70	Q9NW82	654 aa		4.17	□□□□□ -1.74
GABRB3-223	ENST00000637293	ZBTB47	Q9UFB7	747 aa	Predicted RBP	4.16	□□□□□ -1.74
GABRB3-223	ENST00000637293	CDK11B	P21127	795 aa	Known RBP	4.15	□□□□□ -1.75
GABRB3-223	ENST00000637293	MKRN4P	Q13434	485 aa	Predicted RBP	4.15	□□□□□ -1.75
GABRB3-223	ENST00000637293	ZC3H15	Q8WU90	426 aa	Known RBP	4.15	□□□□□ -1.75
GABRB3-223	ENST00000637293	CDK11A	Q9UQ88	783 aa	Predicted RBP	4.15	□□□□□ -1.75
GABRB3-223	ENST00000637293	PLEKHG5	O94827	1062 aa		4.14	□□□□□ -1.75
GABRB3-223	ENST00000637293	HSP90B1	P14625	803 aa	Known RBP	4.14	□□□□□ -1.75
GABRB3-223	ENST00000637293	KCTD17	Q8N5Z5	321 aa		4.14	□□□□□ -1.75
GABRB3-223	ENST00000637293	SLC24A3	Q9HC58	644 aa		4.13	□□□□□ -1.75
GABRB3-223	ENST00000637293	LOC105371045	A0A1W2PR82	267 aa		4.12	□□□□□ -1.75
GABRB3-223	ENST00000637293	APBB1	O00213	710 aa		4.12	□□□□□ -1.75
GABRB3-223	ENST00000637293	NKX1-1	Q15270	411 aa	Predicted RBP	4.12	□□□□□ -1.75
GABRB3-223	ENST00000637293	MIER1	Q8N108	512 aa		4.12	□□□□□ -1.75
GABRB3-223	ENST00000637293	RAD21	O60216	631 aa		4.11	□□□□□ -1.75
GABRB3-223	ENST00000637293	TRH	P20396	242 aa	Predicted RBP	4.11	□□□□□ -1.75
GABRB3-223	ENST00000637293	FLII	Q13045	1269 aa		4.1	□□□□□ -1.75
GABRB3-223	ENST00000637293	KCNV2	Q8TDN2	545 aa		4.1	□□□□□ -1.75
GABRB3-223	ENST00000637293	NECTIN2	Q92692	538 aa		4.1	□□□□□ -1.75
GABRB3-223	ENST00000637293	C1orf115	Q9H7X2	142 aa		4.1	□□□□□ -1.75
GABRB3-223	ENST00000637293		U3KPZ7	1027 aa	Predicted RBP	4.1	□□□□□ -1.75
GABRB3-223	ENST00000637293	GSE1	Q14687	1217 aa		4.09	□□□□□ -1.75
GABRB3-223	ENST00000637293	TRAIP	Q9BWF2	469 aa		4.09	□□□□□ -1.75
GABRB3-223	ENST00000637293	STK25	O00506	426 aa		4.08	□□□□□ -1.76
GABRB3-223	ENST00000637293	RIOK3	O14730	519 aa	Known RBP	4.08	□□□□□ -1.76
GABRB3-223	ENST00000637293	TMCO4	Q5TGY1	634 aa		4.08	□□□□□ -1.76
GABRB3-223	ENST00000637293	SMYD5	Q6GMV2	418 aa		4.08	□□□□□ -1.76
GABRB3-223	ENST00000637293	ARHGEF1	Q92888	912 aa	Known RBP	4.08	□□□□□ -1.76
GABRB3-223	ENST00000637293	PUS7	Q96PZ0	661 aa	Known RBP	4.08	□□□□□ -1.76
GABRB3-223	ENST00000637293	ARID3C	A6NKF2	412 aa		4.07	□□□□□ -1.76
GABRB3-223	ENST00000637293	ZMYND10	O75800	440 aa		4.07	□□□□□ -1.76
GABRB3-223	ENST00000637293	IL27	Q8NEV9	243 aa		4.07	□□□□□ -1.76
GABRB3-223	ENST00000637293	AK7	Q96M32	723 aa		4.07	□□□□□ -1.76
GABRB3-223	ENST00000637293	VGF	O15240	615 aa	Predicted RBP	4.06	□□□□□ -1.76
GABRB3-223	ENST00000637293	IGSF3	O75054	1194 aa		4.06	□□□□□ -1.76
GABRB3-223	ENST00000637293	RGS22	Q8NE09	1264 aa		4.05	□□□□□ -1.76
GABRB3-223	ENST00000637293	RNF25	Q96BH1	459 aa	Predicted RBP	4.05	□□□□□ -1.76
GABRB3-223	ENST00000637293	TESPA1	A2RU30	521 aa	Predicted RBP	4.04	□□□□□ -1.76
GABRB3-223	ENST00000637293		E9PSI1	815 aa		4.04	□□□□□ -1.76
GABRB3-223	ENST00000637293	BARGIN	Q6ZT62	677 aa		4.04	□□□□□ -1.76
GABRB3-223	ENST00000637293	CCDC82	Q8N4S0	544 aa		4.04	□□□□□ -1.76
GABRB3-223	ENST00000637293	ZBTB12	Q9Y330	459 aa	Predicted RBP	4.04	□□□□□ -1.76
GABRB3-223	ENST00000637293	DCAF8L1	A6NGE4	600 aa		4.03	□□□□□ -1.76
GABRB3-223	ENST00000637293		A6NJR5	290 aa		4.03	□□□□□ -1.76
GABRB3-223	ENST00000637293	RBM25	P49756	843 aa	Known RBP	4.03	□□□□□ -1.76
GABRB3-223	ENST00000637293	MKRN3	Q13064	507 aa	Known RBP	4.03	□□□□□ -1.76
GABRB3-223	ENST00000637293	AEBP1	Q8IUX7	1158 aa		4.03	□□□□□ -1.76
GABRB3-223	ENST00000637293	KDM4C	Q9H3R0	1056 aa		4.03	□□□□□ -1.76
GABRB3-223	ENST00000637293	MTMR7	Q9Y216	660 aa		4.03	□□□□□ -1.76
GABRB3-223	ENST00000637293	PATL2	C9JE40	543 aa	Known RBP	4.02	□□□□□ -1.77
GABRB3-223	ENST00000637293	MFAP1	P55081	439 aa	Known RBP	4.02	□□□□□ -1.77
GABRB3-223	ENST00000637293	PDE4C	Q08493	712 aa		4.02	□□□□□ -1.77
GABRB3-223	ENST00000637293	KRI1	Q8N9T8	703 aa	Known RBP	4.02	□□□□□ -1.77
GABRB3-223	ENST00000637293	SGIP1	Q9BQI5	828 aa		4.02	□□□□□ -1.77
GABRB3-223	ENST00000637293	GPBP1L1	Q9HC44	474 aa	Predicted RBP	4.02	□□□□□ -1.77
GABRB3-223	ENST00000637293	TRAK2	O60296	914 aa		4.01	□□□□□ -1.77
GABRB3-223	ENST00000637293	SERPINA10	Q9UK55	444 aa		4.01	□□□□□ -1.77
GABRB3-223	ENST00000637293	STK24	Q9Y6E0	443 aa		4.01	□□□□□ -1.77
GABRB3-223	ENST00000637293	POLA2	Q14181	598 aa		4	□□□□□ -1.77
GABRB3-223	ENST00000637293	E2F4	Q16254	413 aa		4	□□□□□ -1.77
GABRB3-223	ENST00000637293	CCDC97	Q96F63	343 aa	Predicted RBP	4	□□□□□ -1.77
GABRB3-223	ENST00000637293	BCL11B	Q9C0K0	894 aa	Predicted RBP	4	□□□□□ -1.77
GABRB3-223	ENST00000637293	SEMA3E	O15041	775 aa		3.99	□□□□□ -1.77
GABRB3-223	ENST00000637293	FBXW7	Q969H0	707 aa		3.99	□□□□□ -1.77
GABRB3-223	ENST00000637293	DDRGK1	Q96HY6	314 aa		3.99	□□□□□ -1.77
GABRB3-223	ENST00000637293	ZNF692	Q9BU19	519 aa	Predicted RBP	3.99	□□□□□ -1.77
GABRB3-223	ENST00000637293	GZF1	Q9H116	711 aa	Predicted RBP	3.99	□□□□□ -1.77
GABRB3-223	ENST00000637293	ZNF316	A6NFI3	1004 aa	Predicted RBP	3.98	□□□□□ -1.77
GABRB3-223	ENST00000637293	RSPH4A	Q5TD94	716 aa		3.98	□□□□□ -1.77
GABRB3-223	ENST00000637293	PDE4D	Q08499	809 aa		3.97	□□□□□ -1.77
GABRB3-223	ENST00000637293	DCAF8	Q5TAQ9	597 aa		3.97	□□□□□ -1.77
GABRB3-223	ENST00000637293	TRIM66	O15016	1216 aa		3.96	□□□□□ -1.78
GABRB3-223	ENST00000637293	FOXD4L5	Q5VV16	416 aa	Predicted RBP	3.96	□□□□□ -1.78
GABRB3-223	ENST00000637293	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	3.96	□□□□□ -1.78
GABRB3-223	ENST00000637293	USP35	Q9P2H5	1018 aa		3.96	□□□□□ -1.78
GABRB3-223	ENST00000637293	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	3.95	□□□□□ -1.78
GABRB3-223	ENST00000637293	CHRM1	P11229	460 aa	Predicted RBP	3.95	□□□□□ -1.78
GABRB3-223	ENST00000637293	CADPS2	Q86UW7	1296 aa		3.95	□□□□□ -1.78
GABRB3-223	ENST00000637293	GPIHBP1	Q8IV16	184 aa		3.95	□□□□□ -1.78
GABRB3-223	ENST00000637293	ZFP91	Q96JP5	570 aa	Predicted RBP	3.95	□□□□□ -1.78
GABRB3-223	ENST00000637293	CHMP4A	Q9BY43	222 aa		3.95	□□□□□ -1.78
GABRB3-223	ENST00000637293	GOPC	Q9HD26	462 aa		3.95	□□□□□ -1.78
GABRB3-223	ENST00000637293	AMOTL2	Q9Y2J4	779 aa		3.95	□□□□□ -1.78
GABRB3-223	ENST00000637293	CANX	P27824	592 aa	Known RBP	3.94	□□□□□ -1.78
GABRB3-223	ENST00000637293	CLUAP1	Q96AJ1	413 aa		3.94	□□□□□ -1.78
GABRB3-223	ENST00000637293	FAM212A	Q96EL1	285 aa		3.94	□□□□□ -1.78
GABRB3-223	ENST00000637293	MYT1L	Q9UL68	1186 aa		3.94	□□□□□ -1.78
GABRB3-223	ENST00000637293	ACIN1	Q9UKV3	1341 aa	Known RBP	3.94	□□□□□ -1.78
GABRB3-223	ENST00000637293	SPDYE2B	A6NHP3	402 aa		3.93	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 49 ms