RNA–Protein interactions for RNA: ENST00000633552.1

GPCPD1-207, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-207ENST00000633552 ZNF579Q8NAF0 562 aaKnown RBP11.23□□□□□ -0.61
GPCPD1-207ENST00000633552 ECM2O94769 699 aaPredicted RBP11.22□□□□□ -0.61
GPCPD1-207ENST00000633552 ZRANB1Q9UGI0 708 aa11.22□□□□□ -0.61
GPCPD1-207ENST00000633552 CREBZFQ9NS37 354 aa11.19□□□□□ -0.62
GPCPD1-207ENST00000633552 PAK3O75914 559 aaPredicted RBP11.17□□□□□ -0.62
GPCPD1-207ENST00000633552 PLSCR2Q9NRY7 297 aa11.14□□□□□ -0.63
GPCPD1-207ENST00000633552 SLC24A1O60721 1099 aa11.11□□□□□ -0.63
GPCPD1-207ENST00000633552 DCAF8Q5TAQ9 597 aa11.11□□□□□ -0.63
GPCPD1-207ENST00000633552 GSE1Q14687 1217 aa11.1□□□□□ -0.63
GPCPD1-207ENST00000633552 NPM1P06748 294 aaKnown RBP eCLIP11.09□□□□□ -0.63
GPCPD1-207ENST00000633552 FAM212AQ96EL1 285 aa11.09□□□□□ -0.63
GPCPD1-207ENST00000633552 NUBP1P53384 320 aa11.07□□□□□ -0.64
GPCPD1-207ENST00000633552 GALR2O43603 387 aaPredicted RBP11.06□□□□□ -0.64
GPCPD1-207ENST00000633552 MNX1P50219 401 aaPredicted RBP11.06□□□□□ -0.64
GPCPD1-207ENST00000633552 RGL2O15211 777 aa11.05□□□□□ -0.64
GPCPD1-207ENST00000633552 TRIM41Q8WV44 630 aa11.04□□□□□ -0.64
GPCPD1-207ENST00000633552 RASEFQ8IZ41 740 aa11.01□□□□□ -0.65
GPCPD1-207ENST00000633552 PHF12Q96QT6 1004 aa10.98□□□□□ -0.65
GPCPD1-207ENST00000633552 OTUD5Q96G74 571 aa10.97□□□□□ -0.65
GPCPD1-207ENST00000633552 TSPYL2Q9H2G4 693 aaPredicted RBP10.95□□□□□ -0.66
GPCPD1-207ENST00000633552 POTEB2H3BUK9 544 aa10.93□□□□□ -0.66
GPCPD1-207ENST00000633552 CHGAP10645 457 aaKnown RBP10.92□□□□□ -0.66
GPCPD1-207ENST00000633552 PYGBP11216 843 aa10.91□□□□□ -0.66
GPCPD1-207ENST00000633552 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.91□□□□□ -0.66
GPCPD1-207ENST00000633552 PLCB2Q00722 1185 aa10.89□□□□□ -0.67
GPCPD1-207ENST00000633552 RIOK3O14730 519 aaKnown RBP10.88□□□□□ -0.67
GPCPD1-207ENST00000633552 TAOK2Q9UL54 1235 aa10.88□□□□□ -0.67
GPCPD1-207ENST00000633552 SLC39A7Q92504 469 aa10.87□□□□□ -0.67
GPCPD1-207ENST00000633552 RNF25Q96BH1 459 aaPredicted RBP10.87□□□□□ -0.67
GPCPD1-207ENST00000633552 POTEMA6NI47 508 aa10.86□□□□□ -0.67
GPCPD1-207ENST00000633552 C7P10643 843 aa10.86□□□□□ -0.67
GPCPD1-207ENST00000633552 BBXQ8WY36 941 aaPredicted RBP10.86□□□□□ -0.67
GPCPD1-207ENST00000633552 HAP1P54257 671 aaPredicted RBP10.85□□□□□ -0.67
GPCPD1-207ENST00000633552 ASTLQ6HA08 431 aaPredicted RBP10.85□□□□□ -0.67
GPCPD1-207ENST00000633552 MAMSTRQ6ZN01 415 aa10.84□□□□□ -0.67
GPCPD1-207ENST00000633552 PELP1Q8IZL8 1130 aaKnown RBP10.84□□□□□ -0.67
GPCPD1-207ENST00000633552 MS4A3Q96HJ5 214 aa10.84□□□□□ -0.67
GPCPD1-207ENST00000633552 METRNQ9UJH8 293 aa10.84□□□□□ -0.67
GPCPD1-207ENST00000633552 CFAP44Q96MT7 982 aa10.82□□□□□ -0.68
GPCPD1-207ENST00000633552 ATMINO43313 823 aaPredicted RBP10.81□□□□□ -0.68
GPCPD1-207ENST00000633552 CHRM1P11229 460 aaPredicted RBP10.81□□□□□ -0.68
GPCPD1-207ENST00000633552 POTEGQ6S5H5 508 aa10.81□□□□□ -0.68
GPCPD1-207ENST00000633552 PAXIP1Q6ZW49 1069 aaPredicted RBP10.81□□□□□ -0.68
GPCPD1-207ENST00000633552 STK25O00506 426 aa10.8□□□□□ -0.68
GPCPD1-207ENST00000633552 VGFO15240 615 aaPredicted RBP10.8□□□□□ -0.68
GPCPD1-207ENST00000633552 HS6ST3Q8IZP7 471 aa10.79□□□□□ -0.68
GPCPD1-207ENST00000633552 PCDH10Q9P2E7 1040 aa10.77□□□□□ -0.69
GPCPD1-207ENST00000633552 CCDC61Q9Y6R9 512 aa10.76□□□□□ -0.69
GPCPD1-207ENST00000633552 ZNF467Q7Z7K2 595 aaPredicted RBP10.75□□□□□ -0.69
GPCPD1-207ENST00000633552 SPRYD3Q8NCJ5 442 aa10.74□□□□□ -0.69
GPCPD1-207ENST00000633552 SCUBE2Q9NQ36 999 aa10.74□□□□□ -0.69
GPCPD1-207ENST00000633552 STK24Q9Y6E0 443 aa10.74□□□□□ -0.69
GPCPD1-207ENST00000633552 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.73□□□□□ -0.69
GPCPD1-207ENST00000633552 ZFP91Q96JP5 570 aaPredicted RBP10.73□□□□□ -0.69
GPCPD1-207ENST00000633552 BCL11BQ9C0K0 894 aaPredicted RBP10.72□□□□□ -0.69
GPCPD1-207ENST00000633552 PCDHB8Q9UN66 801 aa10.71□□□□□ -0.69
GPCPD1-207ENST00000633552 PCDHB13Q9Y5F0 798 aa10.71□□□□□ -0.69
GPCPD1-207ENST00000633552 POTEJP0CG39 1038 aa10.7□□□□□ -0.7
GPCPD1-207ENST00000633552 ATN1P54259 1190 aaPredicted RBP10.69□□□□□ -0.7
GPCPD1-207ENST00000633552 KIF12Q96FN5 646 aa10.69□□□□□ -0.7
GPCPD1-207ENST00000633552 PDAP1Q13442 181 aaKnown RBP10.67□□□□□ -0.7
GPCPD1-207ENST00000633552 MAP3K13O43283 966 aa10.65□□□□□ -0.7
GPCPD1-207ENST00000633552 TIE1P35590 1138 aa10.64□□□□□ -0.71
GPCPD1-207ENST00000633552 SGIP1Q9BQI5 828 aa10.64□□□□□ -0.71
GPCPD1-207ENST00000633552 LCE2DQ5TA82 110 aaPredicted RBP10.63□□□□□ -0.71
GPCPD1-207ENST00000633552 IFNL1Q8IU54 200 aa10.63□□□□□ -0.71
GPCPD1-207ENST00000633552 FAM163AQ96GL9 167 aaPredicted RBP10.63□□□□□ -0.71
GPCPD1-207ENST00000633552 BMP2KQ9NSY1 1161 aaPredicted RBP10.63□□□□□ -0.71
GPCPD1-207ENST00000633552 PSEN1P49768 467 aa10.62□□□□□ -0.71
GPCPD1-207ENST00000633552 SEC24BO95487 1268 aa10.6□□□□□ -0.71
GPCPD1-207ENST00000633552 NKX1-1Q15270 411 aaPredicted RBP10.6□□□□□ -0.71
GPCPD1-207ENST00000633552 DNAJC5Q9H3Z4 198 aa10.59□□□□□ -0.71
GPCPD1-207ENST00000633552 RYDENQ9NUL5 291 aaKnown RBP10.57□□□□□ -0.72
GPCPD1-207ENST00000633552 VSIG10Q8N0Z9 540 aa10.56□□□□□ -0.72
GPCPD1-207ENST00000633552 TSHZ2Q9NRE2 1034 aa10.56□□□□□ -0.72
GPCPD1-207ENST00000633552 TRPC6Q9Y210 931 aa10.54□□□□□ -0.72
GPCPD1-207ENST00000633552 POTEFA5A3E0 1075 aa10.53□□□□□ -0.72
GPCPD1-207ENST00000633552 TTLL13PA6NNM8 815 aa10.53□□□□□ -0.72
GPCPD1-207ENST00000633552 GTPBP6O43824 516 aaPredicted RBP10.53□□□□□ -0.72
GPCPD1-207ENST00000633552 IER5LQ5T953 404 aa10.53□□□□□ -0.72
GPCPD1-207ENST00000633552 CABP2Q9NPB3 220 aa10.53□□□□□ -0.72
GPCPD1-207ENST00000633552 GOLGA2Q08379 1002 aa10.52□□□□□ -0.73
GPCPD1-207ENST00000633552 TMEM106CQ9BVX2 250 aa10.48□□□□□ -0.73
GPCPD1-207ENST00000633552 TRIM35Q9UPQ4 493 aa10.48□□□□□ -0.73
GPCPD1-207ENST00000633552 COLQQ9Y215 455 aaPredicted RBP10.48□□□□□ -0.73
GPCPD1-207ENST00000633552 EFCAB3Q8N7B9 438 aa10.46□□□□□ -0.73
GPCPD1-207ENST00000633552 KDM2AQ9Y2K7 1162 aa10.45□□□□□ -0.74
GPCPD1-207ENST00000633552 MFRPQ9BY79 579 aa10.42□□□□□ -0.74
GPCPD1-207ENST00000633552 NLRP6P59044 892 aa10.41□□□□□ -0.74
GPCPD1-207ENST00000633552 MKRN3Q13064 507 aaKnown RBP10.41□□□□□ -0.74
GPCPD1-207ENST00000633552 SOX12O15370 315 aa10.4□□□□□ -0.74
GPCPD1-207ENST00000633552 PLCG2P16885 1265 aa10.4□□□□□ -0.74
GPCPD1-207ENST00000633552 SLAIN1Q8ND83 568 aa10.4□□□□□ -0.74
GPCPD1-207ENST00000633552 PHF8Q9UPP1 1060 aa10.4□□□□□ -0.74
GPCPD1-207ENST00000633552 CDAN1Q8IWY9 1227 aa10.39□□□□□ -0.75
GPCPD1-207ENST00000633552 BCANQ96GW7 911 aa10.35□□□□□ -0.75
GPCPD1-207ENST00000633552 FBXO22Q8NEZ5 403 aa10.32□□□□□ -0.76
GPCPD1-207ENST00000633552 ST18O60284 1047 aa10.31□□□□□ -0.76
GPCPD1-207ENST00000633552 SNPHO15079 494 aa10.3□□□□□ -0.76
GPCPD1-207ENST00000633552 PPP1R37O75864 691 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms