RNA–Protein interactions for RNA: ENST00000603474.1

LINC01588-215, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 3

Gene LINC01588, Length 269 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-215ENST00000603474 EIF5BO60841 1220 aaKnown RBP8.64□□□□□ -1.03
LINC01588-215ENST00000603474 NPM1P06748 294 aaKnown RBP eCLIP8.62□□□□□ -1.03
LINC01588-215ENST00000603474 POTEIP0CG38 1075 aa8.62□□□□□ -1.03
LINC01588-215ENST00000603474 C19orf67A6NJJ6 358 aa8.6□□□□□ -1.03
LINC01588-215ENST00000603474 SPRYD3Q8NCJ5 442 aa8.59□□□□□ -1.03
LINC01588-215ENST00000603474 DNAJC5Q9H3Z4 198 aa8.56□□□□□ -1.04
LINC01588-215ENST00000603474 VASPP50552 380 aaPredicted RBP8.54□□□□□ -1.04
LINC01588-215ENST00000603474 OTUD5Q96G74 571 aa8.53□□□□□ -1.04
LINC01588-215ENST00000603474 IFNLR1Q8IU57 520 aaPredicted RBP8.52□□□□□ -1.05
LINC01588-215ENST00000603474 MYCNP04198 464 aaPredicted RBP8.49□□□□□ -1.05
LINC01588-215ENST00000603474 POLA2Q14181 598 aa8.48□□□□□ -1.05
LINC01588-215ENST00000603474 LOC105371045A0A1W2PR82 267 aa8.47□□□□□ -1.05
LINC01588-215ENST00000603474 SLC4A2P04920 1241 aa8.47□□□□□ -1.05
LINC01588-215ENST00000603474 CCDC9Q9Y3X0 531 aaKnown RBP8.45□□□□□ -1.06
LINC01588-215ENST00000603474 PRKAR2AP13861 404 aaKnown RBP8.43□□□□□ -1.06
LINC01588-215ENST00000603474 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.41□□□□□ -1.06
LINC01588-215ENST00000603474 ECM2O94769 699 aaPredicted RBP8.41□□□□□ -1.06
LINC01588-215ENST00000603474 HNRNPUL2Q1KMD3 747 aaKnown RBP8.41□□□□□ -1.06
LINC01588-215ENST00000603474 BRPF1P55201 1214 aaPredicted RBP8.4□□□□□ -1.06
LINC01588-215ENST00000603474 ZBTB7CA1YPR0 619 aa8.36□□□□□ -1.07
LINC01588-215ENST00000603474 ARID3AQ99856 593 aa8.33□□□□□ -1.08
LINC01588-215ENST00000603474 RSPH6AQ9H0K4 717 aa8.32□□□□□ -1.08
LINC01588-215ENST00000603474 SHROOM4Q9ULL8 1493 aa8.32□□□□□ -1.08
LINC01588-215ENST00000603474 POTEB2H3BUK9 544 aa8.31□□□□□ -1.08
LINC01588-215ENST00000603474 RGL2O15211 777 aa8.31□□□□□ -1.08
LINC01588-215ENST00000603474 SAMD1Q6SPF0 538 aaPredicted RBP8.31□□□□□ -1.08
LINC01588-215ENST00000603474 ZMYND15Q9H091 742 aa8.31□□□□□ -1.08
LINC01588-215ENST00000603474 DCBLD2Q96PD2 775 aa8.3□□□□□ -1.08
LINC01588-215ENST00000603474 SPDYE4A6NLX3 237 aa8.27□□□□□ -1.09
LINC01588-215ENST00000603474 LCE2DQ5TA82 110 aaPredicted RBP8.27□□□□□ -1.09
LINC01588-215ENST00000603474 IGSF3O75054 1194 aa8.26□□□□□ -1.09
LINC01588-215ENST00000603474 CHGAP10645 457 aaKnown RBP8.26□□□□□ -1.09
LINC01588-215ENST00000603474 PDIA4P13667 645 aaKnown RBP8.26□□□□□ -1.09
LINC01588-215ENST00000603474 CDK11BP21127 795 aaKnown RBP8.26□□□□□ -1.09
LINC01588-215ENST00000603474 NEUROD2Q15784 382 aa8.26□□□□□ -1.09
LINC01588-215ENST00000603474 CDK11AQ9UQ88 783 aaPredicted RBP8.26□□□□□ -1.09
LINC01588-215ENST00000603474 HMGB1P09429 215 aaKnown RBP8.25□□□□□ -1.09
LINC01588-215ENST00000603474 OSCARQ8IYS5 282 aa8.25□□□□□ -1.09
LINC01588-215ENST00000603474 PROM2Q8N271 834 aa8.25□□□□□ -1.09
LINC01588-215ENST00000603474 ATF5Q9Y2D1 282 aaPredicted RBP8.24□□□□□ -1.09
LINC01588-215ENST00000603474 PLEKHG5O94827 1062 aa8.22□□□□□ -1.09
LINC01588-215ENST00000603474 SPOCK2Q92563 424 aa8.22□□□□□ -1.09
LINC01588-215ENST00000603474 NECTIN2Q92692 538 aa8.22□□□□□ -1.09
LINC01588-215ENST00000603474 FAM163AQ96GL9 167 aaPredicted RBP8.22□□□□□ -1.09
LINC01588-215ENST00000603474 LMOD2Q6P5Q4 547 aa8.21□□□□□ -1.1
LINC01588-215ENST00000603474 HSP90B1P14625 803 aaKnown RBP8.2□□□□□ -1.1
LINC01588-215ENST00000603474 C1orf115Q9H7X2 142 aa8.2□□□□□ -1.1
LINC01588-215ENST00000603474 CDAN1Q8IWY9 1227 aa8.18□□□□□ -1.1
LINC01588-215ENST00000603474 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.17□□□□□ -1.1
LINC01588-215ENST00000603474 CLCN6P51797 869 aa8.16□□□□□ -1.1
LINC01588-215ENST00000603474 ZBTB12Q9Y330 459 aaPredicted RBP8.15□□□□□ -1.1
LINC01588-215ENST00000603474 CHMP4AQ9BY43 222 aa8.14□□□□□ -1.11
LINC01588-215ENST00000603474 MMRN1Q13201 1228 aa8.12□□□□□ -1.11
LINC01588-215ENST00000603474 KCTD17Q8N5Z5 321 aa8.11□□□□□ -1.11
LINC01588-215ENST00000603474 PUS7Q96PZ0 661 aaKnown RBP8.1□□□□□ -1.11
LINC01588-215ENST00000603474 CLEC11AQ9Y240 323 aa8.1□□□□□ -1.11
LINC01588-215ENST00000603474 ARID3CA6NKF2 412 aa8.09□□□□□ -1.11
LINC01588-215ENST00000603474 RAD21O60216 631 aa8.09□□□□□ -1.11
LINC01588-215ENST00000603474 CHADLQ6NUI6 762 aa8.09□□□□□ -1.11
LINC01588-215ENST00000603474 CD44P16070 742 aaKnown RBP8.08□□□□□ -1.12
LINC01588-215ENST00000603474 HS6ST3Q8IZP7 471 aa8.08□□□□□ -1.12
LINC01588-215ENST00000603474 APBB1O00213 710 aa8.07□□□□□ -1.12
LINC01588-215ENST00000603474 SLC24A3Q9HC58 644 aa8.07□□□□□ -1.12
LINC01588-215ENST00000603474 P3H3Q8IVL6 736 aa8.06□□□□□ -1.12
LINC01588-215ENST00000603474 RGS22Q8NE09 1264 aa8.05□□□□□ -1.12
LINC01588-215ENST00000603474 ZC3H15Q8WU90 426 aaKnown RBP8.04□□□□□ -1.12
LINC01588-215ENST00000603474 MTMR7Q9Y216 660 aa8.01□□□□□ -1.13
LINC01588-215ENST00000603474 GTPBP6O43824 516 aaPredicted RBP8□□□□□ -1.13
LINC01588-215ENST00000603474 SPNS2Q8IVW8 549 aa8□□□□□ -1.13
LINC01588-215ENST00000603474 RBM25P49756 843 aaKnown RBP7.99□□□□□ -1.13
LINC01588-215ENST00000603474 NKX1-1Q15270 411 aaPredicted RBP7.99□□□□□ -1.13
LINC01588-215ENST00000603474 SPDYE1Q8NFV5 336 aaPredicted RBP7.99□□□□□ -1.13
LINC01588-215ENST00000603474 POTEJP0CG39 1038 aa7.97□□□□□ -1.13
LINC01588-215ENST00000603474 ZNF428Q96B54 188 aa7.96□□□□□ -1.14
LINC01588-215ENST00000603474 TRAIPQ9BWF2 469 aa7.96□□□□□ -1.14
LINC01588-215ENST00000603474 TMCO4Q5TGY1 634 aa7.95□□□□□ -1.14
LINC01588-215ENST00000603474 FOXD4L5Q5VV16 416 aaPredicted RBP7.95□□□□□ -1.14
LINC01588-215ENST00000603474 MAMSTRQ6ZN01 415 aa7.95□□□□□ -1.14
LINC01588-215ENST00000603474 FOXD4L4Q8WXT5 416 aaPredicted RBP7.95□□□□□ -1.14
LINC01588-215ENST00000603474 AEBP1Q8IUX7 1158 aa7.94□□□□□ -1.14
LINC01588-215ENST00000603474 CCDC82Q8N4S0 544 aa7.94□□□□□ -1.14
LINC01588-215ENST00000603474 KCNV2Q8TDN2 545 aa7.94□□□□□ -1.14
LINC01588-215ENST00000603474 MKRN4PQ13434 485 aaPredicted RBP7.93□□□□□ -1.14
LINC01588-215ENST00000603474 CIZ1Q9ULV3 898 aaPredicted RBP7.93□□□□□ -1.14
LINC01588-215ENST00000603474 IL27Q8NEV9 243 aa7.92□□□□□ -1.14
LINC01588-215ENST00000603474 BRD2P25440 801 aaKnown RBP7.91□□□□□ -1.14
LINC01588-215ENST00000603474 MFAP1P55081 439 aaKnown RBP7.91□□□□□ -1.14
LINC01588-215ENST00000603474 MKRN3Q13064 507 aaKnown RBP7.91□□□□□ -1.14
LINC01588-215ENST00000603474 GALR2O43603 387 aaPredicted RBP7.89□□□□□ -1.15
LINC01588-215ENST00000603474 DHX37Q8IY37 1157 aaKnown RBP7.89□□□□□ -1.15
LINC01588-215ENST00000603474 E9PSI1 815 aa7.88□□□□□ -1.15
LINC01588-215ENST00000603474 GPBP1L1Q9HC44 474 aaPredicted RBP7.88□□□□□ -1.15
LINC01588-215ENST00000603474 WDR70Q9NW82 654 aa7.88□□□□□ -1.15
LINC01588-215ENST00000603474 UBE2Q2Q8WVN8 375 aa7.87□□□□□ -1.15
LINC01588-215ENST00000603474 GZF1Q9H116 711 aaPredicted RBP7.87□□□□□ -1.15
LINC01588-215ENST00000603474 USP35Q9P2H5 1018 aa7.87□□□□□ -1.15
LINC01588-215ENST00000603474 ZNF579Q8NAF0 562 aaKnown RBP7.86□□□□□ -1.15
LINC01588-215ENST00000603474 POLR3GLQ9BT43 218 aa7.86□□□□□ -1.15
LINC01588-215ENST00000603474 ZMYND10O75800 440 aa7.85□□□□□ -1.15
LINC01588-215ENST00000603474 PLCD3Q8N3E9 789 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms