RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 MS4A3Q96HJ5 214 aa10.92□□□□□ -0.66
TVP23B-205ENST00000572845 ASTLQ6HA08 431 aaPredicted RBP10.9□□□□□ -0.66
TVP23B-205ENST00000572845 KIF12Q96FN5 646 aa10.88□□□□□ -0.67
TVP23B-205ENST00000572845 SLC39A7Q92504 469 aa10.87□□□□□ -0.67
TVP23B-205ENST00000572845 ATMINO43313 823 aaPredicted RBP10.86□□□□□ -0.67
TVP23B-205ENST00000572845 C7P10643 843 aa10.86□□□□□ -0.67
TVP23B-205ENST00000572845 FBXO3Q9UK99 471 aa10.86□□□□□ -0.67
TVP23B-205ENST00000572845 RASEFQ8IZ41 740 aa10.85□□□□□ -0.67
TVP23B-205ENST00000572845 PELP1Q8IZL8 1130 aaKnown RBP10.83□□□□□ -0.68
TVP23B-205ENST00000572845 SGIP1Q9BQI5 828 aa10.82□□□□□ -0.68
TVP23B-205ENST00000572845 MAP3K13O43283 966 aa10.8□□□□□ -0.68
TVP23B-205ENST00000572845 METRNQ9UJH8 293 aa10.8□□□□□ -0.68
TVP23B-205ENST00000572845 TIE1P35590 1138 aa10.79□□□□□ -0.68
TVP23B-205ENST00000572845 NUBP1P53384 320 aa10.79□□□□□ -0.68
TVP23B-205ENST00000572845 FAM212AQ96EL1 285 aa10.78□□□□□ -0.68
TVP23B-205ENST00000572845 OTUD5Q96G74 571 aa10.77□□□□□ -0.69
TVP23B-205ENST00000572845 POTEB2H3BUK9 544 aa10.76□□□□□ -0.69
TVP23B-205ENST00000572845 MAMSTRQ6ZN01 415 aa10.76□□□□□ -0.69
TVP23B-205ENST00000572845 ATN1P54259 1190 aaPredicted RBP10.75□□□□□ -0.69
TVP23B-205ENST00000572845 BMP2KQ9NSY1 1161 aaPredicted RBP10.73□□□□□ -0.69
TVP23B-205ENST00000572845 PCDHB13Q9Y5F0 798 aa10.72□□□□□ -0.69
TVP23B-205ENST00000572845 TTLL13PA6NNM8 815 aa10.67□□□□□ -0.7
TVP23B-205ENST00000572845 DCAF8Q5TAQ9 597 aa10.67□□□□□ -0.7
TVP23B-205ENST00000572845 TRPC6Q9Y210 931 aa10.67□□□□□ -0.7
TVP23B-205ENST00000572845 SCUBE2Q9NQ36 999 aa10.66□□□□□ -0.7
TVP23B-205ENST00000572845 IER5LQ5T953 404 aa10.65□□□□□ -0.7
TVP23B-205ENST00000572845 SEC24BO95487 1268 aa10.64□□□□□ -0.71
TVP23B-205ENST00000572845 KLHL34Q8N239 644 aa10.63□□□□□ -0.71
TVP23B-205ENST00000572845 VASPP50552 380 aaPredicted RBP10.62□□□□□ -0.71
TVP23B-205ENST00000572845 IFNL1Q8IU54 200 aa10.62□□□□□ -0.71
TVP23B-205ENST00000572845 TRIM35Q9UPQ4 493 aa10.61□□□□□ -0.71
TVP23B-205ENST00000572845 GSE1Q14687 1217 aa10.6□□□□□ -0.71
TVP23B-205ENST00000572845 POTEJP0CG39 1038 aa10.59□□□□□ -0.71
TVP23B-205ENST00000572845 TMEM106CQ9BVX2 250 aa10.58□□□□□ -0.72
TVP23B-205ENST00000572845 POTEFA5A3E0 1075 aa10.57□□□□□ -0.72
TVP23B-205ENST00000572845 PYGBP11216 843 aa10.54□□□□□ -0.72
TVP23B-205ENST00000572845 COLQQ9Y215 455 aaPredicted RBP10.53□□□□□ -0.72
TVP23B-205ENST00000572845 CHRM1P11229 460 aaPredicted RBP10.5□□□□□ -0.73
TVP23B-205ENST00000572845 PLCG2P16885 1265 aa10.5□□□□□ -0.73
TVP23B-205ENST00000572845 ZNF467Q7Z7K2 595 aaPredicted RBP10.5□□□□□ -0.73
TVP23B-205ENST00000572845 POTEMA6NI47 508 aa10.49□□□□□ -0.73
TVP23B-205ENST00000572845 PCDH10Q9P2E7 1040 aa10.48□□□□□ -0.73
TVP23B-205ENST00000572845 POTEGQ6S5H5 508 aa10.47□□□□□ -0.73
TVP23B-205ENST00000572845 OCEL1Q9H607 264 aa10.46□□□□□ -0.73
TVP23B-205ENST00000572845 PCDHB8Q9UN66 801 aa10.46□□□□□ -0.73
TVP23B-205ENST00000572845 FAM163AQ96GL9 167 aaPredicted RBP10.45□□□□□ -0.74
TVP23B-205ENST00000572845 IRX5P78411 483 aaPredicted RBP10.44□□□□□ -0.74
TVP23B-205ENST00000572845 SPOCK2Q92563 424 aa10.44□□□□□ -0.74
TVP23B-205ENST00000572845 GOLGA2Q08379 1002 aa10.41□□□□□ -0.74
TVP23B-205ENST00000572845 PLSCR2Q9NRY7 297 aa10.41□□□□□ -0.74
TVP23B-205ENST00000572845 IFNLR1Q8IU57 520 aaPredicted RBP10.39□□□□□ -0.75
TVP23B-205ENST00000572845 MKRN3Q13064 507 aaKnown RBP10.38□□□□□ -0.75
TVP23B-205ENST00000572845 SLAIN1Q8ND83 568 aa10.38□□□□□ -0.75
TVP23B-205ENST00000572845 CIZ1Q9ULV3 898 aaPredicted RBP10.37□□□□□ -0.75
TVP23B-205ENST00000572845 PSEN1P49768 467 aa10.36□□□□□ -0.75
TVP23B-205ENST00000572845 PDAP1Q13442 181 aaKnown RBP10.34□□□□□ -0.75
TVP23B-205ENST00000572845 LCE2DQ5TA82 110 aaPredicted RBP10.33□□□□□ -0.76
TVP23B-205ENST00000572845 TRIM41Q8WV44 630 aa10.33□□□□□ -0.76
TVP23B-205ENST00000572845 L3MBTL3Q96JM7 780 aaPredicted RBP10.33□□□□□ -0.76
TVP23B-205ENST00000572845 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.33□□□□□ -0.76
TVP23B-205ENST00000572845 SNPHO15079 494 aa10.31□□□□□ -0.76
TVP23B-205ENST00000572845 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.28□□□□□ -0.76
TVP23B-205ENST00000572845 PDCD7Q8N8D1 485 aaKnown RBP10.27□□□□□ -0.77
TVP23B-205ENST00000572845 C3orf67Q6ZVT6 689 aa10.25□□□□□ -0.77
TVP23B-205ENST00000572845 ST18O60284 1047 aa10.23□□□□□ -0.77
TVP23B-205ENST00000572845 TMEM121BQ9BXQ6 578 aaPredicted RBP10.23□□□□□ -0.77
TVP23B-205ENST00000572845 ILDR1Q86SU0 546 aaPredicted RBP10.22□□□□□ -0.77
TVP23B-205ENST00000572845 G3V3G9 751 aa10.2□□□□□ -0.78
TVP23B-205ENST00000572845 CABP2Q9NPB3 220 aa10.2□□□□□ -0.78
TVP23B-205ENST00000572845 CDAN1Q8IWY9 1227 aa10.17□□□□□ -0.78
TVP23B-205ENST00000572845 BOLA1Q9Y3E2 137 aa10.13□□□□□ -0.79
TVP23B-205ENST00000572845 RIOK3O14730 519 aaKnown RBP10.1□□□□□ -0.79
TVP23B-205ENST00000572845 TAOK2Q9UL54 1235 aa10.1□□□□□ -0.79
TVP23B-205ENST00000572845 DPY19L2Q6NUT2 758 aa10.09□□□□□ -0.79
TVP23B-205ENST00000572845 VGFO15240 615 aaPredicted RBP10.08□□□□□ -0.8
TVP23B-205ENST00000572845 SOX12O15370 315 aa10.08□□□□□ -0.8
TVP23B-205ENST00000572845 EFCAB3Q8N7B9 438 aa10.07□□□□□ -0.8
TVP23B-205ENST00000572845 EMP3P54852 163 aa10.02□□□□□ -0.81
TVP23B-205ENST00000572845 MARVELD3Q96A59 401 aa10.02□□□□□ -0.81
TVP23B-205ENST00000572845 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.01□□□□□ -0.81
TVP23B-205ENST00000572845 ZFP91Q96JP5 570 aaPredicted RBP10.01□□□□□ -0.81
TVP23B-205ENST00000572845 RNF25Q96BH1 459 aaPredicted RBP10□□□□□ -0.81
TVP23B-205ENST00000572845 DOK7Q18PE1 504 aa9.99□□□□□ -0.81
TVP23B-205ENST00000572845 ZNF710Q8N1W2 664 aa9.98□□□□□ -0.81
TVP23B-205ENST00000572845 RIMBP2O15034 1052 aa9.97□□□□□ -0.81
TVP23B-205ENST00000572845 MICALL2Q8IY33 904 aa9.95□□□□□ -0.82
TVP23B-205ENST00000572845 HOXB3P14651 431 aaPredicted RBP9.94□□□□□ -0.82
TVP23B-205ENST00000572845 NLRP6P59044 892 aa9.94□□□□□ -0.82
TVP23B-205ENST00000572845 FAM205CA6NFA0 338 aa9.93□□□□□ -0.82
TVP23B-205ENST00000572845 HOXB1P14653 301 aaPredicted RBP9.93□□□□□ -0.82
TVP23B-205ENST00000572845 HS3ST6Q96QI5 342 aa9.92□□□□□ -0.82
TVP23B-205ENST00000572845 PHF8Q9UPP1 1060 aa9.92□□□□□ -0.82
TVP23B-205ENST00000572845 SPNS2Q8IVW8 549 aa9.91□□□□□ -0.82
TVP23B-205ENST00000572845 ZSWIM6Q9HCJ5 1215 aa9.91□□□□□ -0.82
TVP23B-205ENST00000572845 ECM2O94769 699 aaPredicted RBP9.9□□□□□ -0.82
TVP23B-205ENST00000572845 BCL11BQ9C0K0 894 aaPredicted RBP9.9□□□□□ -0.82
TVP23B-205ENST00000572845 MS4A4AQ96JQ5 239 aa9.89□□□□□ -0.83
TVP23B-205ENST00000572845 STK24Q9Y6E0 443 aa9.89□□□□□ -0.83
TVP23B-205ENST00000572845 MMRN1Q13201 1228 aa9.88□□□□□ -0.83
TVP23B-205ENST00000572845 STK25O00506 426 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms