RNA–Protein interactions for RNA: ENST00000570473.5

TRIM25-203, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 498 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-203ENST00000570473 CLSTN1O94985 981 aa12.46□□□□□ -0.41
TRIM25-203ENST00000570473 VSIG10Q8N0Z9 540 aa12.46□□□□□ -0.41
TRIM25-203ENST00000570473 TICAM2Q86XR7 235 aa12.45□□□□□ -0.42
TRIM25-203ENST00000570473 CCER1Q8TC90 406 aaPredicted RBP12.45□□□□□ -0.42
TRIM25-203ENST00000570473 NCLP19338 710 aaKnown RBP12.44□□□□□ -0.42
TRIM25-203ENST00000570473 POLR3GLQ9BT43 218 aa12.43□□□□□ -0.42
TRIM25-203ENST00000570473 NAP1L2Q9ULW6 460 aaPredicted RBP12.43□□□□□ -0.42
TRIM25-203ENST00000570473 ARID4BQ4LE39 1312 aaPredicted RBP12.42□□□□□ -0.42
TRIM25-203ENST00000570473 PPP6R1Q9UPN7 881 aa12.4□□□□□ -0.42
TRIM25-203ENST00000570473 C11orf95C9JLR9 678 aaPredicted RBP12.39□□□□□ -0.43
TRIM25-203ENST00000570473 ADRA2BP18089 450 aa12.38□□□□□ -0.43
TRIM25-203ENST00000570473 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.37□□□□□ -0.43
TRIM25-203ENST00000570473 VGFO15240 615 aaPredicted RBP12.36□□□□□ -0.43
TRIM25-203ENST00000570473 RRP9O43818 475 aaKnown RBP12.36□□□□□ -0.43
TRIM25-203ENST00000570473 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.36□□□□□ -0.43
TRIM25-203ENST00000570473 NPM1P06748 294 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRIM25-203ENST00000570473 FTSJ3Q8IY81 847 aaKnown RBP12.33□□□□□ -0.44
TRIM25-203ENST00000570473 NEFMP07197 916 aa12.32□□□□□ -0.44
TRIM25-203ENST00000570473 SUPT16HQ9Y5B9 1047 aaKnown RBP12.32□□□□□ -0.44
TRIM25-203ENST00000570473 SUPT5HO00267 1087 aaKnown RBP12.31□□□□□ -0.44
TRIM25-203ENST00000570473 UBTFP17480 764 aaKnown RBP12.3□□□□□ -0.44
TRIM25-203ENST00000570473 SETQ01105 290 aaPredicted RBP12.3□□□□□ -0.44
TRIM25-203ENST00000570473 PTMAP06454 111 aaKnown RBP12.29□□□□□ -0.44
TRIM25-203ENST00000570473 PTMSP20962 102 aa12.29□□□□□ -0.44
TRIM25-203ENST00000570473 CNGB1Q14028 1251 aaPredicted RBP12.29□□□□□ -0.44
TRIM25-203ENST00000570473 RTL5Q5HYW3 569 aaPredicted RBP12.29□□□□□ -0.44
TRIM25-203ENST00000570473 DIEXFQ68CQ4 756 aaKnown RBP12.29□□□□□ -0.44
TRIM25-203ENST00000570473 MCCP23508 829 aa12.26□□□□□ -0.45
TRIM25-203ENST00000570473 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.26□□□□□ -0.45
TRIM25-203ENST00000570473 CANXP27824 592 aaKnown RBP12.25□□□□□ -0.45
TRIM25-203ENST00000570473 ZFP91Q96JP5 570 aaPredicted RBP12.25□□□□□ -0.45
TRIM25-203ENST00000570473 RBM19Q9Y4C8 960 aaKnown RBP12.25□□□□□ -0.45
TRIM25-203ENST00000570473 GRIPAP1Q4V328 841 aa12.24□□□□□ -0.45
TRIM25-203ENST00000570473 CENPJQ9HC77 1338 aaPredicted RBP12.24□□□□□ -0.45
TRIM25-203ENST00000570473 IGSF3O75054 1194 aa12.23□□□□□ -0.45
TRIM25-203ENST00000570473 CALD1Q05682 793 aaKnown RBP12.23□□□□□ -0.45
TRIM25-203ENST00000570473 ANP32BQ92688 251 aaKnown RBP12.23□□□□□ -0.45
TRIM25-203ENST00000570473 PSMD1Q99460 953 aa12.23□□□□□ -0.45
TRIM25-203ENST00000570473 PIAS4Q8N2W9 510 aaPredicted RBP12.22□□□□□ -0.45
TRIM25-203ENST00000570473 BBXQ8WY36 941 aaPredicted RBP12.21□□□□□ -0.45
TRIM25-203ENST00000570473 PLCD4Q9BRC7 762 aa12.21□□□□□ -0.45
TRIM25-203ENST00000570473 RNF216Q9NWF9 866 aaPredicted RBP12.21□□□□□ -0.45
TRIM25-203ENST00000570473 MYO15BQ96JP2 1530 aa12.17□□□□□ -0.46
TRIM25-203ENST00000570473 CLGNO14967 610 aa12.17□□□□□ -0.46
TRIM25-203ENST00000570473 PPM1GO15355 546 aaPredicted RBP12.16□□□□□ -0.46
TRIM25-203ENST00000570473 CC2D2BQ6DHV5 1058 aa12.15□□□□□ -0.46
TRIM25-203ENST00000570473 SECISBP2LQ93073 1101 aaKnown RBP12.15□□□□□ -0.46
TRIM25-203ENST00000570473 HSP90AA2PQ14568 343 aaPredicted RBP12.14□□□□□ -0.47
TRIM25-203ENST00000570473 GTF2E1P29083 439 aaPredicted RBP12.13□□□□□ -0.47
TRIM25-203ENST00000570473 ZNF592Q92610 1267 aa12.13□□□□□ -0.47
TRIM25-203ENST00000570473 AXDND1Q5T1B0 1012 aaPredicted RBP12.12□□□□□ -0.47
TRIM25-203ENST00000570473 CNPY4Q8N129 248 aa12.12□□□□□ -0.47
TRIM25-203ENST00000570473 MSH5O43196 834 aa12.11□□□□□ -0.47
TRIM25-203ENST00000570473 IL27Q8NEV9 243 aa12.11□□□□□ -0.47
TRIM25-203ENST00000570473 FAM43AQ8N2R8 423 aa12.1□□□□□ -0.47
TRIM25-203ENST00000570473 CHMP4BQ9H444 224 aaKnown RBP12.1□□□□□ -0.47
TRIM25-203ENST00000570473 USP35Q9P2H5 1018 aa12.1□□□□□ -0.47
TRIM25-203ENST00000570473 ANP32AP39687 249 aaKnown RBP12.09□□□□□ -0.47
TRIM25-203ENST00000570473 ZNF622Q969S3 477 aaKnown RBP eCLIP12.09□□□□□ -0.474e-12■□□□□ 8.4
TRIM25-203ENST00000570473 PHF14O94880 888 aa12.08□□□□□ -0.48
TRIM25-203ENST00000570473 STAC3Q96MF2 364 aa12.08□□□□□ -0.48
TRIM25-203ENST00000570473 WASHC2CQ9Y4E1 1318 aa12.07□□□□□ -0.48
TRIM25-203ENST00000570473 PRDM4Q9UKN5 801 aa12.05□□□□□ -0.48
TRIM25-203ENST00000570473 MMP14P50281 582 aa12.04□□□□□ -0.48
TRIM25-203ENST00000570473 IRX6P78412 446 aaPredicted RBP12.04□□□□□ -0.48
TRIM25-203ENST00000570473 TRIM41Q8WV44 630 aa12.04□□□□□ -0.48
TRIM25-203ENST00000570473 TRIM44Q96DX7 344 aaPredicted RBP12.04□□□□□ -0.48
TRIM25-203ENST00000570473 BRPF3Q9ULD4 1205 aa12.03□□□□□ -0.48
TRIM25-203ENST00000570473 ZBTB7CA1YPR0 619 aa12.02□□□□□ -0.49
TRIM25-203ENST00000570473 WWC1Q8IX03 1113 aa12.01□□□□□ -0.49
TRIM25-203ENST00000570473 MAFGO15525 162 aa12□□□□□ -0.49
TRIM25-203ENST00000570473 FAM193AP78312 1265 aa12□□□□□ -0.49
TRIM25-203ENST00000570473 DNAJC2Q99543 621 aaKnown RBP12□□□□□ -0.49
TRIM25-203ENST00000570473 HSP90AA1P07900 732 aaKnown RBP11.98□□□□□ -0.49
TRIM25-203ENST00000570473 CEP120Q8N960 986 aa11.98□□□□□ -0.49
TRIM25-203ENST00000570473 WASHC2AQ641Q2 1341 aa11.96□□□□□ -0.49
TRIM25-203ENST00000570473 RGS22Q8NE09 1264 aa11.95□□□□□ -0.5
TRIM25-203ENST00000570473 CERS3Q8IU89 383 aa11.93□□□□□ -0.5
TRIM25-203ENST00000570473 PDCL3Q9H2J4 239 aa11.93□□□□□ -0.5
TRIM25-203ENST00000570473 PRDM10Q9NQV6 1147 aa11.93□□□□□ -0.5
TRIM25-203ENST00000570473 TAF3Q5VWG9 929 aa11.92□□□□□ -0.5
TRIM25-203ENST00000570473 ANAPC15P60006 121 aa11.91□□□□□ -0.5
TRIM25-203ENST00000570473 SLC4A1APQ9BWU0 796 aaKnown RBP11.91□□□□□ -0.5
TRIM25-203ENST00000570473 IRX3P78415 501 aaPredicted RBP11.89□□□□□ -0.51
TRIM25-203ENST00000570473 GPATCH11Q8N954 259 aa11.89□□□□□ -0.51
TRIM25-203ENST00000570473 CFAP44Q96MT7 982 aa11.89□□□□□ -0.51
TRIM25-203ENST00000570473 NOP58Q9Y2X3 529 aaKnown RBP11.89□□□□□ -0.51
TRIM25-203ENST00000570473 LAS1LQ9Y4W2 734 aaKnown RBP11.89□□□□□ -0.51
TRIM25-203ENST00000570473 UTP14CQ5TAP6 766 aaKnown RBP11.87□□□□□ -0.51
TRIM25-203ENST00000570473 MAP7D2Q96T17 732 aa11.87□□□□□ -0.51
TRIM25-203ENST00000570473 KDM2AQ9Y2K7 1162 aa11.87□□□□□ -0.51
TRIM25-203ENST00000570473 ZNF316A6NFI3 1004 aaPredicted RBP11.86□□□□□ -0.51
TRIM25-203ENST00000570473 TMED8Q6PL24 325 aaPredicted RBP11.86□□□□□ -0.51
TRIM25-203ENST00000570473 SMAP1Q8IYB5 467 aaPredicted RBP11.86□□□□□ -0.51
TRIM25-203ENST00000570473 KCNG1Q9UIX4 513 aa11.85□□□□□ -0.51
TRIM25-203ENST00000570473 NBPF20Q3BBV1 942 aa11.84□□□□□ -0.51
TRIM25-203ENST00000570473 PRDM16Q9HAZ2 1276 aa11.84□□□□□ -0.51
TRIM25-203ENST00000570473 PATL2C9JE40 543 aaKnown RBP11.81□□□□□ -0.52
TRIM25-203ENST00000570473 HDAC5Q9UQL6 1122 aa11.81□□□□□ -0.52
TRIM25-203ENST00000570473 SLC20A2Q08357 652 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms