RNA–Protein interactions for RNA: ENST00000568945.2

MKRN3-204, Transcript of makorin ring finger protein 3, human

TSL 4

Gene MKRN3, Length 2,740 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MKRN3-204	ENST00000568945	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	14.39	□□□□□ -0.11
MKRN3-204	ENST00000568945	BRPF3	Q9ULD4	1205 aa		14.38	□□□□□ -0.11
MKRN3-204	ENST00000568945	DEK	P35659	375 aa	Known RBP	14.35	□□□□□ -0.11
MKRN3-204	ENST00000568945	FKBP8	Q14318	412 aa		14.33	□□□□□ -0.12
MKRN3-204	ENST00000568945	ZMYND15	Q9H091	742 aa		14.31	□□□□□ -0.12
MKRN3-204	ENST00000568945	ZNF592	Q92610	1267 aa		14.31	□□□□□ -0.12
MKRN3-204	ENST00000568945	ZFP91	Q96JP5	570 aa	Predicted RBP	14.29	□□□□□ -0.12
MKRN3-204	ENST00000568945	CLSTN1	O94985	981 aa		14.28	□□□□□ -0.12
MKRN3-204	ENST00000568945	NCL	P19338	710 aa	Known RBP	14.26	□□□□□ -0.13
MKRN3-204	ENST00000568945	MYT1L	Q9UL68	1186 aa		14.24	□□□□□ -0.13
MKRN3-204	ENST00000568945	ZBTB7C	A1YPR0	619 aa		14.23	□□□□□ -0.13
MKRN3-204	ENST00000568945	TMED8	Q6PL24	325 aa	Predicted RBP	14.21	□□□□□ -0.14
MKRN3-204	ENST00000568945	NAP1L2	Q9ULW6	460 aa	Predicted RBP	14.21	□□□□□ -0.14
MKRN3-204	ENST00000568945	NECTIN2	Q92692	538 aa		14.19	□□□□□ -0.14
MKRN3-204	ENST00000568945	PSMD1	Q99460	953 aa		14.19	□□□□□ -0.14
MKRN3-204	ENST00000568945	ARID3A	Q99856	593 aa		14.18	□□□□□ -0.14
MKRN3-204	ENST00000568945	CNPY4	Q8N129	248 aa		14.16	□□□□□ -0.14
MKRN3-204	ENST00000568945	PPARGC1B	Q86YN6	1023 aa	Known RBP	14.15	□□□□□ -0.14
MKRN3-204	ENST00000568945	PRDM10	Q9NQV6	1147 aa		14.15	□□□□□ -0.14
MKRN3-204	ENST00000568945	TEX2	Q8IWB9	1127 aa		14.14	□□□□□ -0.15
MKRN3-204	ENST00000568945	NPM1	P06748	294 aa	Known RBP eCLIP	14.12	□□□□□ -0.15
MKRN3-204	ENST00000568945	NBR1	Q14596	966 aa		14.12	□□□□□ -0.15
MKRN3-204	ENST00000568945	CERS3	Q8IU89	383 aa		14.12	□□□□□ -0.15
MKRN3-204	ENST00000568945	CHRM1	P11229	460 aa	Predicted RBP	14.11	□□□□□ -0.15
MKRN3-204	ENST00000568945	ZNF692	Q9BU19	519 aa	Predicted RBP	14.1	□□□□□ -0.15
MKRN3-204	ENST00000568945	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	14.09	□□□□□ -0.15
MKRN3-204	ENST00000568945	IPO4	Q8TEX9	1081 aa	Known RBP	14.08	□□□□□ -0.16
MKRN3-204	ENST00000568945	CWC22	Q9HCG8	908 aa	Known RBP	14.07	□□□□□ -0.16
MKRN3-204	ENST00000568945	NEUROD1	Q13562	356 aa		14.06	□□□□□ -0.16
MKRN3-204	ENST00000568945	SECISBP2L	Q93073	1101 aa	Known RBP	14.03	□□□□□ -0.16
MKRN3-204	ENST00000568945	PLCD4	Q9BRC7	762 aa		14.03	□□□□□ -0.16
MKRN3-204	ENST00000568945	PRDM16	Q9HAZ2	1276 aa		14.01	□□□□□ -0.17
MKRN3-204	ENST00000568945	CC2D2B	Q6DHV5	1058 aa		14	□□□□□ -0.17
MKRN3-204	ENST00000568945	ZNF428	Q96B54	188 aa		14	□□□□□ -0.17
MKRN3-204	ENST00000568945	TRH	P20396	242 aa	Predicted RBP	13.98	□□□□□ -0.17
MKRN3-204	ENST00000568945	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.98	□□□□□ -0.17
MKRN3-204	ENST00000568945	RNF216	Q9NWF9	866 aa	Predicted RBP	13.97	□□□□□ -0.17
MKRN3-204	ENST00000568945	WWC1	Q8IX03	1113 aa		13.96	□□□□□ -0.17
MKRN3-204	ENST00000568945	ZNF526	Q8TF50	670 aa	Predicted RBP	13.96	□□□□□ -0.17
MKRN3-204	ENST00000568945	CHMP4B	Q9H444	224 aa	Known RBP	13.96	□□□□□ -0.17
MKRN3-204	ENST00000568945	PTMS	P20962	102 aa		13.93	□□□□□ -0.18
MKRN3-204	ENST00000568945	GRIPAP1	Q4V328	841 aa		13.93	□□□□□ -0.18
MKRN3-204	ENST00000568945	FTSJ3	Q8IY81	847 aa	Known RBP	13.93	□□□□□ -0.18
MKRN3-204	ENST00000568945	FAM177A1	Q8N128	213 aa	Predicted RBP	13.92	□□□□□ -0.18
MKRN3-204	ENST00000568945	RAD21	O60216	631 aa		13.91	□□□□□ -0.18
MKRN3-204	ENST00000568945	SET	Q01105	290 aa	Predicted RBP	13.89	□□□□□ -0.19
MKRN3-204	ENST00000568945	KCTD17	Q8N5Z5	321 aa		13.88	□□□□□ -0.19
MKRN3-204	ENST00000568945	KCNG1	Q9UIX4	513 aa		13.88	□□□□□ -0.19
MKRN3-204	ENST00000568945	TSHZ2	Q9NRE2	1034 aa		13.87	□□□□□ -0.19
MKRN3-204	ENST00000568945	C1orf115	Q9H7X2	142 aa		13.87	□□□□□ -0.19
MKRN3-204	ENST00000568945	RBM25	P49756	843 aa	Known RBP	13.86	□□□□□ -0.19
MKRN3-204	ENST00000568945	RGS22	Q8NE09	1264 aa		13.86	□□□□□ -0.19
MKRN3-204	ENST00000568945	MCC	P23508	829 aa		13.85	□□□□□ -0.19
MKRN3-204	ENST00000568945	BBX	Q8WY36	941 aa	Predicted RBP	13.85	□□□□□ -0.19
MKRN3-204	ENST00000568945	PPM1G	O15355	546 aa	Predicted RBP	13.84	□□□□□ -0.19
MKRN3-204	ENST00000568945	USP35	Q9P2H5	1018 aa		13.84	□□□□□ -0.19
MKRN3-204	ENST00000568945	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.84	□□□□□ -0.19
MKRN3-204	ENST00000568945	MTMR7	Q9Y216	660 aa		13.84	□□□□□ -0.19
MKRN3-204	ENST00000568945	PTMA	P06454	111 aa	Known RBP	13.82	□□□□□ -0.2
MKRN3-204	ENST00000568945	CCDC27	Q2M243	656 aa		13.8	□□□□□ -0.2
MKRN3-204	ENST00000568945	ANAPC15	P60006	121 aa		13.79	□□□□□ -0.2
MKRN3-204	ENST00000568945	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.78	□□□□□ -0.2
MKRN3-204	ENST00000568945	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.78	□□□□□ -0.2
MKRN3-204	ENST00000568945	NEFM	P07197	916 aa		13.77	□□□□□ -0.2
MKRN3-204	ENST00000568945	NPM3	O75607	178 aa	Known RBP	13.76	□□□□□ -0.21
MKRN3-204	ENST00000568945	GTF2E1	P29083	439 aa	Predicted RBP	13.76	□□□□□ -0.21
MKRN3-204	ENST00000568945	MAFG	O15525	162 aa		13.74	□□□□□ -0.21
MKRN3-204	ENST00000568945	DNAJC2	Q99543	621 aa	Known RBP	13.74	□□□□□ -0.21
MKRN3-204	ENST00000568945	BRPF1	P55201	1214 aa	Predicted RBP	13.73	□□□□□ -0.21
MKRN3-204	ENST00000568945	GPATCH11	Q8N954	259 aa		13.73	□□□□□ -0.21
MKRN3-204	ENST00000568945	CANX	P27824	592 aa	Known RBP	13.72	□□□□□ -0.21
MKRN3-204	ENST00000568945	ADRA2B	P18089	450 aa		13.71	□□□□□ -0.21
MKRN3-204	ENST00000568945	FAM193A	P78312	1265 aa		13.7	□□□□□ -0.22
MKRN3-204	ENST00000568945	KDM4A	O75164	1064 aa		13.7	□□□□□ -0.22
MKRN3-204	ENST00000568945	YTHDC1	Q96MU7	727 aa	Known RBP	13.69	□□□□□ -0.22
MKRN3-204	ENST00000568945	OS9	Q13438	667 aa	Predicted RBP	13.69	□□□□□ -0.22
MKRN3-204	ENST00000568945	RTL5	Q5HYW3	569 aa	Predicted RBP	13.69	□□□□□ -0.22
MKRN3-204	ENST00000568945	CNGB1	Q14028	1251 aa	Predicted RBP	13.68	□□□□□ -0.22
MKRN3-204	ENST00000568945	CCDC180	Q9P1Z9	1646 aa		13.67	□□□□□ -0.22
MKRN3-204	ENST00000568945	ARID3C	A6NKF2	412 aa		13.64	□□□□□ -0.23
MKRN3-204	ENST00000568945	ILDR1	Q86SU0	546 aa	Predicted RBP	13.64	□□□□□ -0.23
MKRN3-204	ENST00000568945	PATL2	C9JE40	543 aa	Known RBP	13.63	□□□□□ -0.23
MKRN3-204	ENST00000568945	STAC3	Q96MF2	364 aa		13.63	□□□□□ -0.23
MKRN3-204	ENST00000568945	CLGN	O14967	610 aa		13.57	□□□□□ -0.24
MKRN3-204	ENST00000568945	PHF14	O94880	888 aa		13.56	□□□□□ -0.24
MKRN3-204	ENST00000568945	FAM50A	Q14320	339 aa	Known RBP	13.55	□□□□□ -0.24
MKRN3-204	ENST00000568945	PLEKHD1	A6NEE1	506 aa		13.55	□□□□□ -0.24
MKRN3-204	ENST00000568945	HSP90AB4P	Q58FF6	505 aa		13.54	□□□□□ -0.24
MKRN3-204	ENST00000568945	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
MKRN3-204	ENST00000568945		E9PSI1	815 aa		13.52	□□□□□ -0.24
MKRN3-204	ENST00000568945	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.52	□□□□□ -0.24
MKRN3-204	ENST00000568945	ZCCHC6	Q5VYS8	1495 aa	Known RBP	13.51	□□□□□ -0.25
MKRN3-204	ENST00000568945	EXOC8	Q8IYI6	725 aa		13.51	□□□□□ -0.25
MKRN3-204	ENST00000568945	LAS1L	Q9Y4W2	734 aa	Known RBP	13.5	□□□□□ -0.25
MKRN3-204	ENST00000568945	VGF	O15240	615 aa	Predicted RBP	13.49	□□□□□ -0.25
MKRN3-204	ENST00000568945	TMTC2	Q8N394	836 aa		13.49	□□□□□ -0.25
MKRN3-204	ENST00000568945	IL27	Q8NEV9	243 aa		13.49	□□□□□ -0.25
MKRN3-204	ENST00000568945	MFAP1	P55081	439 aa	Known RBP	13.49	□□□□□ -0.25
MKRN3-204	ENST00000568945	FAM9B	Q8IZU0	186 aa		13.48	□□□□□ -0.25
MKRN3-204	ENST00000568945	TMCO4	Q5TGY1	634 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms