RNA–Protein interactions for RNA: ENST00000559378.4

HMGN2P47-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 47, humanhuman

BASIC

Gene HMGN2P47, Length 272 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P47-201ENST00000559378 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.58□□□□□ -1.04
HMGN2P47-201ENST00000559378 PAXIP1Q6ZW49 1069 aaPredicted RBP8.55□□□□□ -1.04
HMGN2P47-201ENST00000559378 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.55□□□□□ -1.04
HMGN2P47-201ENST00000559378 NPM1P06748 294 aaKnown RBP eCLIP8.54□□□□□ -1.04
HMGN2P47-201ENST00000559378 NECTIN2Q92692 538 aa8.53□□□□□ -1.04
HMGN2P47-201ENST00000559378 ADRA2BP18089 450 aa8.52□□□□□ -1.05
HMGN2P47-201ENST00000559378 NPM3O75607 178 aaKnown RBP8.51□□□□□ -1.05
HMGN2P47-201ENST00000559378 PSMD1Q99460 953 aa8.51□□□□□ -1.05
HMGN2P47-201ENST00000559378 ZNF592Q92610 1267 aa8.5□□□□□ -1.05
HMGN2P47-201ENST00000559378 TSHZ2Q9NRE2 1034 aa8.49□□□□□ -1.05
HMGN2P47-201ENST00000559378 A0A0U1RQG5 324 aaPredicted RBP8.48□□□□□ -1.05
HMGN2P47-201ENST00000559378 BBXQ8WY36 941 aaPredicted RBP8.48□□□□□ -1.05
HMGN2P47-201ENST00000559378 BRPF3Q9ULD4 1205 aa8.48□□□□□ -1.05
HMGN2P47-201ENST00000559378 NCLP19338 710 aaKnown RBP8.47□□□□□ -1.05
HMGN2P47-201ENST00000559378 GLIPR1L2Q4G1C9 344 aa8.47□□□□□ -1.05
HMGN2P47-201ENST00000559378 ZFP91Q96JP5 570 aaPredicted RBP8.47□□□□□ -1.05
HMGN2P47-201ENST00000559378 IRX6P78412 446 aaPredicted RBP8.46□□□□□ -1.06
HMGN2P47-201ENST00000559378 RBM10P98175 930 aaKnown RBP8.45□□□□□ -1.06
HMGN2P47-201ENST00000559378 CC2D2BQ6DHV5 1058 aa8.45□□□□□ -1.06
HMGN2P47-201ENST00000559378 ZMYND15Q9H091 742 aa8.45□□□□□ -1.06
HMGN2P47-201ENST00000559378 CERS3Q8IU89 383 aa8.43□□□□□ -1.06
HMGN2P47-201ENST00000559378 RAD21O60216 631 aa8.42□□□□□ -1.06
HMGN2P47-201ENST00000559378 ZNF692Q9BU19 519 aaPredicted RBP8.41□□□□□ -1.06
HMGN2P47-201ENST00000559378 KCTD17Q8N5Z5 321 aa8.4□□□□□ -1.06
HMGN2P47-201ENST00000559378 RGS22Q8NE09 1264 aa8.4□□□□□ -1.06
HMGN2P47-201ENST00000559378 TMED8Q6PL24 325 aaPredicted RBP8.39□□□□□ -1.07
HMGN2P47-201ENST00000559378 ARID4BQ4LE39 1312 aaPredicted RBP8.38□□□□□ -1.07
HMGN2P47-201ENST00000559378 MYT1LQ9UL68 1186 aa8.38□□□□□ -1.07
HMGN2P47-201ENST00000559378 BRPF1P55201 1214 aaPredicted RBP8.37□□□□□ -1.07
HMGN2P47-201ENST00000559378 SETQ01105 290 aaPredicted RBP8.37□□□□□ -1.07
HMGN2P47-201ENST00000559378 PLCD4Q9BRC7 762 aa8.37□□□□□ -1.07
HMGN2P47-201ENST00000559378 DNAJC5Q9H3Z4 198 aa8.37□□□□□ -1.07
HMGN2P47-201ENST00000559378 CWC22Q9HCG8 908 aaKnown RBP8.37□□□□□ -1.07
HMGN2P47-201ENST00000559378 TEX2Q8IWB9 1127 aa8.36□□□□□ -1.07
HMGN2P47-201ENST00000559378 FAM177A1Q8N128 213 aaPredicted RBP8.36□□□□□ -1.07
HMGN2P47-201ENST00000559378 FOXD4L1Q9NU39 408 aa8.36□□□□□ -1.07
HMGN2P47-201ENST00000559378 SALL2Q9Y467 1007 aaPredicted RBP8.36□□□□□ -1.07
HMGN2P47-201ENST00000559378 TRHP20396 242 aaPredicted RBP8.35□□□□□ -1.07
HMGN2P47-201ENST00000559378 CHRM1P11229 460 aaPredicted RBP8.34□□□□□ -1.07
HMGN2P47-201ENST00000559378 RBM25P49756 843 aaKnown RBP8.34□□□□□ -1.07
HMGN2P47-201ENST00000559378 C1orf115Q9H7X2 142 aa8.34□□□□□ -1.07
HMGN2P47-201ENST00000559378 MTMR7Q9Y216 660 aa8.34□□□□□ -1.07
HMGN2P47-201ENST00000559378 PTMSP20962 102 aa8.33□□□□□ -1.08
HMGN2P47-201ENST00000559378 USP35Q9P2H5 1018 aa8.32□□□□□ -1.08
HMGN2P47-201ENST00000559378 CNPY4Q8N129 248 aa8.31□□□□□ -1.08
HMGN2P47-201ENST00000559378 PRDM16Q9HAZ2 1276 aa8.31□□□□□ -1.08
HMGN2P47-201ENST00000559378 GRIPAP1Q4V328 841 aa8.3□□□□□ -1.08
HMGN2P47-201ENST00000559378 SPRYD3Q8NCJ5 442 aa8.3□□□□□ -1.08
HMGN2P47-201ENST00000559378 ZNF428Q96B54 188 aa8.3□□□□□ -1.08
HMGN2P47-201ENST00000559378 NAP1L2Q9ULW6 460 aaPredicted RBP8.3□□□□□ -1.08
HMGN2P47-201ENST00000559378 PPM1GO15355 546 aaPredicted RBP8.29□□□□□ -1.08
HMGN2P47-201ENST00000559378 PRDM10Q9NQV6 1147 aa8.29□□□□□ -1.08
HMGN2P47-201ENST00000559378 DEKP35659 375 aaKnown RBP8.28□□□□□ -1.08
HMGN2P47-201ENST00000559378 IPO4Q8TEX9 1081 aaKnown RBP8.28□□□□□ -1.08
HMGN2P47-201ENST00000559378 MCCP23508 829 aa8.27□□□□□ -1.09
HMGN2P47-201ENST00000559378 CCDC27Q2M243 656 aa8.27□□□□□ -1.09
HMGN2P47-201ENST00000559378 PKD2Q13563 968 aa8.26□□□□□ -1.09
HMGN2P47-201ENST00000559378 FOXD4L5Q5VV16 416 aaPredicted RBP8.26□□□□□ -1.09
HMGN2P47-201ENST00000559378 FOXD4L4Q8WXT5 416 aaPredicted RBP8.26□□□□□ -1.09
HMGN2P47-201ENST00000559378 E9PSI1 815 aa8.25□□□□□ -1.09
HMGN2P47-201ENST00000559378 MAFGO15525 162 aa8.25□□□□□ -1.09
HMGN2P47-201ENST00000559378 ZNF526Q8TF50 670 aaPredicted RBP8.25□□□□□ -1.09
HMGN2P47-201ENST00000559378 NEFMP07197 916 aa8.24□□□□□ -1.09
HMGN2P47-201ENST00000559378 RNF216Q9NWF9 866 aaPredicted RBP8.24□□□□□ -1.09
HMGN2P47-201ENST00000559378 ANAPC15P60006 121 aa8.23□□□□□ -1.09
HMGN2P47-201ENST00000559378 PTMAP06454 111 aaKnown RBP8.22□□□□□ -1.09
HMGN2P47-201ENST00000559378 TMCO4Q5TGY1 634 aa8.21□□□□□ -1.1
HMGN2P47-201ENST00000559378 ACIN1Q9UKV3 1341 aaKnown RBP8.21□□□□□ -1.1
HMGN2P47-201ENST00000559378 WWC1Q8IX03 1113 aa8.2□□□□□ -1.1
HMGN2P47-201ENST00000559378 SECISBP2LQ93073 1101 aaKnown RBP8.2□□□□□ -1.1
HMGN2P47-201ENST00000559378 DNAJC2Q99543 621 aaKnown RBP8.2□□□□□ -1.1
HMGN2P47-201ENST00000559378 MFAP1P55081 439 aaKnown RBP8.19□□□□□ -1.1
HMGN2P47-201ENST00000559378 PPP4R3CPQ6ZMV5 832 aa8.19□□□□□ -1.1
HMGN2P47-201ENST00000559378 ARID3CA6NKF2 412 aa8.18□□□□□ -1.1
HMGN2P47-201ENST00000559378 NEUROD2Q15784 382 aa8.18□□□□□ -1.1
HMGN2P47-201ENST00000559378 FTSJ3Q8IY81 847 aaKnown RBP8.18□□□□□ -1.1
HMGN2P47-201ENST00000559378 GPATCH11Q8N954 259 aa8.18□□□□□ -1.1
HMGN2P47-201ENST00000559378 APBB1O00213 710 aa8.17□□□□□ -1.1
HMGN2P47-201ENST00000559378 TRAIPQ9BWF2 469 aa8.16□□□□□ -1.1
HMGN2P47-201ENST00000559378 KDM4AO75164 1064 aa8.15□□□□□ -1.1
HMGN2P47-201ENST00000559378 HSP90AB4PQ58FF6 505 aa8.15□□□□□ -1.1
HMGN2P47-201ENST00000559378 CCDC125Q86Z20 511 aa8.15□□□□□ -1.1
HMGN2P47-201ENST00000559378 AEBP1Q8IUX7 1158 aa8.14□□□□□ -1.11
HMGN2P47-201ENST00000559378 YTHDC1Q96MU7 727 aaKnown RBP8.14□□□□□ -1.11
HMGN2P47-201ENST00000559378 EXOC8Q8IYI6 725 aa8.13□□□□□ -1.11
HMGN2P47-201ENST00000559378 CADPSQ9ULU8 1353 aa8.1□□□□□ -1.11
HMGN2P47-201ENST00000559378 FAM43BQ6ZT52 329 aaPredicted RBP8.1□□□□□ -1.11
HMGN2P47-201ENST00000559378 GZF1Q9H116 711 aaPredicted RBP8.09□□□□□ -1.11
HMGN2P47-201ENST00000559378 LOC102724159A0A0B4J2E5 919 aa8.08□□□□□ -1.12
HMGN2P47-201ENST00000559378 CANXP27824 592 aaKnown RBP8.08□□□□□ -1.12
HMGN2P47-201ENST00000559378 PWP2Q15269 919 aaKnown RBP8.08□□□□□ -1.12
HMGN2P47-201ENST00000559378 CHMP4BQ9H444 224 aaKnown RBP8.08□□□□□ -1.12
HMGN2P47-201ENST00000559378 KCNG1Q9UIX4 513 aa8.08□□□□□ -1.12
HMGN2P47-201ENST00000559378 FAM193AP78312 1265 aa8.07□□□□□ -1.12
HMGN2P47-201ENST00000559378 PLEKHD1A6NEE1 506 aa8.06□□□□□ -1.12
HMGN2P47-201ENST00000559378 PHF14O94880 888 aa8.06□□□□□ -1.12
HMGN2P47-201ENST00000559378 OS9Q13438 667 aaPredicted RBP8.06□□□□□ -1.12
HMGN2P47-201ENST00000559378 RTL5Q5HYW3 569 aaPredicted RBP8.06□□□□□ -1.12
HMGN2P47-201ENST00000559378 ZNF316A6NFI3 1004 aaPredicted RBP8.04□□□□□ -1.12
HMGN2P47-201ENST00000559378 RIPOR2Q9Y4F9 1068 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms