RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 MS4A3Q96HJ5 214 aa10.3□□□□□ -0.76
NUP98-218ENST00000530516 FBXO3Q9UK99 471 aa10.3□□□□□ -0.76
NUP98-218ENST00000530516 ASTLQ6HA08 431 aaPredicted RBP10.28□□□□□ -0.76
NUP98-218ENST00000530516 KIF12Q96FN5 646 aa10.26□□□□□ -0.77
NUP98-218ENST00000530516 SLC39A7Q92504 469 aa10.25□□□□□ -0.77
NUP98-218ENST00000530516 C7P10643 843 aa10.24□□□□□ -0.77
NUP98-218ENST00000530516 RASEFQ8IZ41 740 aa10.24□□□□□ -0.77
NUP98-218ENST00000530516 ATMINO43313 823 aaPredicted RBP10.23□□□□□ -0.77
NUP98-218ENST00000530516 SGIP1Q9BQI5 828 aa10.23□□□□□ -0.77
NUP98-218ENST00000530516 FAM212AQ96EL1 285 aa10.2□□□□□ -0.78
NUP98-218ENST00000530516 TIE1P35590 1138 aa10.19□□□□□ -0.78
NUP98-218ENST00000530516 NUBP1P53384 320 aa10.19□□□□□ -0.78
NUP98-218ENST00000530516 METRNQ9UJH8 293 aa10.18□□□□□ -0.78
NUP98-218ENST00000530516 MAP3K13O43283 966 aa10.17□□□□□ -0.78
NUP98-218ENST00000530516 PELP1Q8IZL8 1130 aaKnown RBP10.17□□□□□ -0.78
NUP98-218ENST00000530516 MAMSTRQ6ZN01 415 aa10.14□□□□□ -0.79
NUP98-218ENST00000530516 BMP2KQ9NSY1 1161 aaPredicted RBP10.13□□□□□ -0.79
NUP98-218ENST00000530516 ATN1P54259 1190 aaPredicted RBP10.12□□□□□ -0.79
NUP98-218ENST00000530516 PCDHB13Q9Y5F0 798 aa10.12□□□□□ -0.79
NUP98-218ENST00000530516 OTUD5Q96G74 571 aa10.11□□□□□ -0.79
NUP98-218ENST00000530516 PLSCR2Q9NRY7 297 aa10.1□□□□□ -0.79
NUP98-218ENST00000530516 POTEB2H3BUK9 544 aa10.09□□□□□ -0.79
NUP98-218ENST00000530516 TTLL13PA6NNM8 815 aa10.07□□□□□ -0.8
NUP98-218ENST00000530516 VASPP50552 380 aaPredicted RBP10.07□□□□□ -0.8
NUP98-218ENST00000530516 IER5LQ5T953 404 aa10.07□□□□□ -0.8
NUP98-218ENST00000530516 SCUBE2Q9NQ36 999 aa10.05□□□□□ -0.8
NUP98-218ENST00000530516 DCAF8Q5TAQ9 597 aa10.04□□□□□ -0.8
NUP98-218ENST00000530516 TRPC6Q9Y210 931 aa10.04□□□□□ -0.8
NUP98-218ENST00000530516 GSE1Q14687 1217 aa10.03□□□□□ -0.8
NUP98-218ENST00000530516 IFNL1Q8IU54 200 aa10.02□□□□□ -0.81
NUP98-218ENST00000530516 KLHL34Q8N239 644 aa10.02□□□□□ -0.81
NUP98-218ENST00000530516 SEC24BO95487 1268 aa10.01□□□□□ -0.81
NUP98-218ENST00000530516 TRIM35Q9UPQ4 493 aa10□□□□□ -0.81
NUP98-218ENST00000530516 TMEM106CQ9BVX2 250 aa9.97□□□□□ -0.81
NUP98-218ENST00000530516 POTEJP0CG39 1038 aa9.95□□□□□ -0.82
NUP98-218ENST00000530516 PYGBP11216 843 aa9.95□□□□□ -0.82
NUP98-218ENST00000530516 POTEFA5A3E0 1075 aa9.94□□□□□ -0.82
NUP98-218ENST00000530516 ZNF467Q7Z7K2 595 aaPredicted RBP9.94□□□□□ -0.82
NUP98-218ENST00000530516 CHRM1P11229 460 aaPredicted RBP9.93□□□□□ -0.82
NUP98-218ENST00000530516 PLCG2P16885 1265 aa9.91□□□□□ -0.82
NUP98-218ENST00000530516 COLQQ9Y215 455 aaPredicted RBP9.91□□□□□ -0.82
NUP98-218ENST00000530516 SPOCK2Q92563 424 aa9.89□□□□□ -0.83
NUP98-218ENST00000530516 PCDH10Q9P2E7 1040 aa9.87□□□□□ -0.83
NUP98-218ENST00000530516 IRX5P78411 483 aaPredicted RBP9.86□□□□□ -0.83
NUP98-218ENST00000530516 POTEMA6NI47 508 aa9.85□□□□□ -0.83
NUP98-218ENST00000530516 OCEL1Q9H607 264 aa9.85□□□□□ -0.83
NUP98-218ENST00000530516 PCDHB8Q9UN66 801 aa9.85□□□□□ -0.83
NUP98-218ENST00000530516 POTEGQ6S5H5 508 aa9.84□□□□□ -0.83
NUP98-218ENST00000530516 GOLGA2Q08379 1002 aa9.82□□□□□ -0.84
NUP98-218ENST00000530516 IFNLR1Q8IU57 520 aaPredicted RBP9.82□□□□□ -0.84
NUP98-218ENST00000530516 TRIM41Q8WV44 630 aa9.82□□□□□ -0.84
NUP98-218ENST00000530516 MKRN3Q13064 507 aaKnown RBP9.79□□□□□ -0.84
NUP98-218ENST00000530516 PDAP1Q13442 181 aaKnown RBP9.78□□□□□ -0.84
NUP98-218ENST00000530516 CIZ1Q9ULV3 898 aaPredicted RBP9.78□□□□□ -0.84
NUP98-218ENST00000530516 PSEN1P49768 467 aa9.77□□□□□ -0.85
NUP98-218ENST00000530516 SLAIN1Q8ND83 568 aa9.77□□□□□ -0.85
NUP98-218ENST00000530516 FAM163AQ96GL9 167 aaPredicted RBP9.77□□□□□ -0.85
NUP98-218ENST00000530516 L3MBTL3Q96JM7 780 aaPredicted RBP9.74□□□□□ -0.85
NUP98-218ENST00000530516 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.73□□□□□ -0.85
NUP98-218ENST00000530516 SNPHO15079 494 aa9.72□□□□□ -0.85
NUP98-218ENST00000530516 LCE2DQ5TA82 110 aaPredicted RBP9.71□□□□□ -0.86
NUP98-218ENST00000530516 PDCD7Q8N8D1 485 aaKnown RBP9.69□□□□□ -0.86
NUP98-218ENST00000530516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.69□□□□□ -0.866e-16■■■■□ 25
NUP98-218ENST00000530516 C3orf67Q6ZVT6 689 aa9.68□□□□□ -0.86
NUP98-218ENST00000530516 TMEM121BQ9BXQ6 578 aaPredicted RBP9.67□□□□□ -0.86
NUP98-218ENST00000530516 ILDR1Q86SU0 546 aaPredicted RBP9.66□□□□□ -0.86
NUP98-218ENST00000530516 CABP2Q9NPB3 220 aa9.63□□□□□ -0.87
NUP98-218ENST00000530516 G3V3G9 751 aa9.62□□□□□ -0.87
NUP98-218ENST00000530516 ST18O60284 1047 aa9.62□□□□□ -0.87
NUP98-218ENST00000530516 TAOK2Q9UL54 1235 aa9.58□□□□□ -0.88
NUP98-218ENST00000530516 RIOK3O14730 519 aaKnown RBP9.57□□□□□ -0.88
NUP98-218ENST00000530516 BOLA1Q9Y3E2 137 aa9.56□□□□□ -0.88
NUP98-218ENST00000530516 VGFO15240 615 aaPredicted RBP9.55□□□□□ -0.88
NUP98-218ENST00000530516 CDAN1Q8IWY9 1227 aa9.55□□□□□ -0.88
NUP98-218ENST00000530516 SOX12O15370 315 aa9.52□□□□□ -0.89
NUP98-218ENST00000530516 EFCAB3Q8N7B9 438 aa9.51□□□□□ -0.89
NUP98-218ENST00000530516 DPY19L2Q6NUT2 758 aa9.49□□□□□ -0.89
NUP98-218ENST00000530516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.46□□□□□ -0.9
NUP98-218ENST00000530516 RNF25Q96BH1 459 aaPredicted RBP9.46□□□□□ -0.9
NUP98-218ENST00000530516 ZFP91Q96JP5 570 aaPredicted RBP9.46□□□□□ -0.9
NUP98-218ENST00000530516 EMP3P54852 163 aa9.44□□□□□ -0.9
NUP98-218ENST00000530516 DOK7Q18PE1 504 aa9.43□□□□□ -0.9
NUP98-218ENST00000530516 RIMBP2O15034 1052 aa9.42□□□□□ -0.9
NUP98-218ENST00000530516 MARVELD3Q96A59 401 aa9.41□□□□□ -0.9
NUP98-218ENST00000530516 NLRP6P59044 892 aa9.4□□□□□ -0.9
NUP98-218ENST00000530516 MICALL2Q8IY33 904 aa9.4□□□□□ -0.9
NUP98-218ENST00000530516 ZNF710Q8N1W2 664 aa9.4□□□□□ -0.9
NUP98-218ENST00000530516 ECM2O94769 699 aaPredicted RBP9.37□□□□□ -0.91
NUP98-218ENST00000530516 HOXB3P14651 431 aaPredicted RBP9.37□□□□□ -0.91
NUP98-218ENST00000530516 BCL11BQ9C0K0 894 aaPredicted RBP9.37□□□□□ -0.91
NUP98-218ENST00000530516 ZSWIM6Q9HCJ5 1215 aa9.37□□□□□ -0.91
NUP98-218ENST00000530516 HOXB1P14653 301 aaPredicted RBP9.36□□□□□ -0.91
NUP98-218ENST00000530516 PHF8Q9UPP1 1060 aa9.36□□□□□ -0.91
NUP98-218ENST00000530516 MS4A4AQ96JQ5 239 aa9.35□□□□□ -0.91
NUP98-218ENST00000530516 HS3ST6Q96QI5 342 aa9.34□□□□□ -0.91
NUP98-218ENST00000530516 STK24Q9Y6E0 443 aa9.34□□□□□ -0.91
NUP98-218ENST00000530516 FAM205CA6NFA0 338 aa9.33□□□□□ -0.92
NUP98-218ENST00000530516 STK25O00506 426 aa9.32□□□□□ -0.92
NUP98-218ENST00000530516 SPNS2Q8IVW8 549 aa9.31□□□□□ -0.92
NUP98-218ENST00000530516 FBXO22Q8NEZ5 403 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms