RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 FAM212AQ96EL1 285 aa14.06□□□□□ -0.16
NPM1-206ENST00000519955 FARP1Q9Y4F1 1045 aaPredicted RBP14.06□□□□□ -0.16
NPM1-206ENST00000519955 DCAF8Q5TAQ9 597 aa14.04□□□□□ -0.16
NPM1-206ENST00000519955 RASEFQ8IZ41 740 aa14.01□□□□□ -0.17
NPM1-206ENST00000519955 DCAF8L2P0C7V8 631 aa14□□□□□ -0.17
NPM1-206ENST00000519955 LHX8Q68G74 356 aa13.96□□□□□ -0.17
NPM1-206ENST00000519955 RGL2O15211 777 aa13.93□□□□□ -0.18
NPM1-206ENST00000519955 CHRM1P11229 460 aaPredicted RBP13.88□□□□□ -0.19
NPM1-206ENST00000519955 TSPYL2Q9H2G4 693 aaPredicted RBP13.86□□□□□ -0.19
NPM1-206ENST00000519955 POTEIP0CG38 1075 aa13.85□□□□□ -0.19
NPM1-206ENST00000519955 PAK3O75914 559 aaPredicted RBP13.84□□□□□ -0.19
NPM1-206ENST00000519955 PYGBP11216 843 aa13.8□□□□□ -0.2
NPM1-206ENST00000519955 RNF25Q96BH1 459 aaPredicted RBP13.8□□□□□ -0.2
NPM1-206ENST00000519955 TAOK2Q9UL54 1235 aa13.8□□□□□ -0.2
NPM1-206ENST00000519955 RIOK3O14730 519 aaKnown RBP13.79□□□□□ -0.2
NPM1-206ENST00000519955 CCDC61Q9Y6R9 512 aa13.77□□□□□ -0.21
NPM1-206ENST00000519955 CD44P16070 742 aaKnown RBP13.75□□□□□ -0.21
NPM1-206ENST00000519955 SLC24A1O60721 1099 aa13.73□□□□□ -0.21
NPM1-206ENST00000519955 VGFO15240 615 aaPredicted RBP13.71□□□□□ -0.21
NPM1-206ENST00000519955 CHGAP10645 457 aaKnown RBP13.71□□□□□ -0.21
NPM1-206ENST00000519955 BBXQ8WY36 941 aaPredicted RBP13.71□□□□□ -0.21
NPM1-206ENST00000519955 ZNF467Q7Z7K2 595 aaPredicted RBP13.68□□□□□ -0.22
NPM1-206ENST00000519955 HS6ST3Q8IZP7 471 aa13.68□□□□□ -0.22
NPM1-206ENST00000519955 ZRANB1Q9UGI0 708 aa13.68□□□□□ -0.22
NPM1-206ENST00000519955 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.67□□□□□ -0.22
NPM1-206ENST00000519955 PLCB2Q00722 1185 aa13.66□□□□□ -0.22
NPM1-206ENST00000519955 SGIP1Q9BQI5 828 aa13.66□□□□□ -0.22
NPM1-206ENST00000519955 ZNF579Q8NAF0 562 aaKnown RBP13.62□□□□□ -0.23
NPM1-206ENST00000519955 KIF12Q96FN5 646 aa13.61□□□□□ -0.23
NPM1-206ENST00000519955 PCDHB13Q9Y5F0 798 aa13.6□□□□□ -0.23
NPM1-206ENST00000519955 STK25O00506 426 aa13.59□□□□□ -0.23
NPM1-206ENST00000519955 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.58□□□□□ -0.24
NPM1-206ENST00000519955 MAP3K13O43283 966 aa13.58□□□□□ -0.24
NPM1-206ENST00000519955 ZFP91Q96JP5 570 aaPredicted RBP13.58□□□□□ -0.24
NPM1-206ENST00000519955 DNAJC5Q9H3Z4 198 aa13.58□□□□□ -0.24
NPM1-206ENST00000519955 PCDHB8Q9UN66 801 aa13.57□□□□□ -0.24
NPM1-206ENST00000519955 PDAP1Q13442 181 aaKnown RBP13.56□□□□□ -0.24
NPM1-206ENST00000519955 PHF12Q96QT6 1004 aa13.55□□□□□ -0.24
NPM1-206ENST00000519955 IFNL1Q8IU54 200 aa13.54□□□□□ -0.24
NPM1-206ENST00000519955 BCL11BQ9C0K0 894 aaPredicted RBP13.53□□□□□ -0.24
NPM1-206ENST00000519955 STK24Q9Y6E0 443 aa13.53□□□□□ -0.24
NPM1-206ENST00000519955 PAXIP1Q6ZW49 1069 aaPredicted RBP13.51□□□□□ -0.25
NPM1-206ENST00000519955 DCBLD2Q96PD2 775 aa13.51□□□□□ -0.25
NPM1-206ENST00000519955 PSEN1P49768 467 aa13.5□□□□□ -0.25
NPM1-206ENST00000519955 CLCN6P51797 869 aa13.5□□□□□ -0.25
NPM1-206ENST00000519955 SPRYD3Q8NCJ5 442 aa13.5□□□□□ -0.25
NPM1-206ENST00000519955 CFAP44Q96MT7 982 aa13.48□□□□□ -0.25
NPM1-206ENST00000519955 GALR2O43603 387 aaPredicted RBP13.45□□□□□ -0.26
NPM1-206ENST00000519955 PLSCR2Q9NRY7 297 aa13.45□□□□□ -0.26
NPM1-206ENST00000519955 HAP1P54257 671 aaPredicted RBP13.44□□□□□ -0.26
NPM1-206ENST00000519955 NKX1-1Q15270 411 aaPredicted RBP13.44□□□□□ -0.26
NPM1-206ENST00000519955 MS4A3Q96HJ5 214 aa13.42□□□□□ -0.26
NPM1-206ENST00000519955 RYDENQ9NUL5 291 aaKnown RBP13.4□□□□□ -0.26
NPM1-206ENST00000519955 POTEB2H3BUK9 544 aa13.39□□□□□ -0.27
NPM1-206ENST00000519955 OTUD5Q96G74 571 aa13.38□□□□□ -0.27
NPM1-206ENST00000519955 GTPBP6O43824 516 aaPredicted RBP13.35□□□□□ -0.27
NPM1-206ENST00000519955 TMEM106CQ9BVX2 250 aa13.32□□□□□ -0.28
NPM1-206ENST00000519955 CABP2Q9NPB3 220 aa13.32□□□□□ -0.28
NPM1-206ENST00000519955 TIE1P35590 1138 aa13.31□□□□□ -0.28
NPM1-206ENST00000519955 TRPC6Q9Y210 931 aa13.3□□□□□ -0.28
NPM1-206ENST00000519955 VSIG10Q8N0Z9 540 aa13.28□□□□□ -0.28
NPM1-206ENST00000519955 EFCAB3Q8N7B9 438 aa13.28□□□□□ -0.28
NPM1-206ENST00000519955 SOX12O15370 315 aa13.27□□□□□ -0.29
NPM1-206ENST00000519955 GOLGA2Q08379 1002 aa13.27□□□□□ -0.29
NPM1-206ENST00000519955 PELP1Q8IZL8 1130 aaKnown RBP13.27□□□□□ -0.29
NPM1-206ENST00000519955 MFRPQ9BY79 579 aa13.24□□□□□ -0.29
NPM1-206ENST00000519955 TSHZ2Q9NRE2 1034 aa13.24□□□□□ -0.29
NPM1-206ENST00000519955 TTLL13PA6NNM8 815 aa13.23□□□□□ -0.29
NPM1-206ENST00000519955 BMP2KQ9NSY1 1161 aaPredicted RBP13.23□□□□□ -0.29
NPM1-206ENST00000519955 NLRP6P59044 892 aa13.22□□□□□ -0.29
NPM1-206ENST00000519955 MKRN3Q13064 507 aaKnown RBP13.19□□□□□ -0.3
NPM1-206ENST00000519955 POTEMA6NI47 508 aa13.17□□□□□ -0.3
NPM1-206ENST00000519955 FBXO22Q8NEZ5 403 aa13.17□□□□□ -0.3
NPM1-206ENST00000519955 PHF8Q9UPP1 1060 aa13.17□□□□□ -0.3
NPM1-206ENST00000519955 TRIM35Q9UPQ4 493 aa13.15□□□□□ -0.3
NPM1-206ENST00000519955 POTEJP0CG39 1038 aa13.14□□□□□ -0.31
NPM1-206ENST00000519955 KDM2AQ9Y2K7 1162 aa13.13□□□□□ -0.31
NPM1-206ENST00000519955 ASTLQ6HA08 431 aaPredicted RBP13.12□□□□□ -0.31
NPM1-206ENST00000519955 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
NPM1-206ENST00000519955 ATMINO43313 823 aaPredicted RBP13.11□□□□□ -0.31
NPM1-206ENST00000519955 ATN1P54259 1190 aaPredicted RBP13.1□□□□□ -0.31
NPM1-206ENST00000519955 METRNQ9UJH8 293 aa13.08□□□□□ -0.32
NPM1-206ENST00000519955 MS4A4AQ96JQ5 239 aa13.07□□□□□ -0.32
NPM1-206ENST00000519955 ILDR1Q86SU0 546 aaPredicted RBP13.06□□□□□ -0.32
NPM1-206ENST00000519955 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.06□□□□□ -0.324e-44■■■■□ 20.8
NPM1-206ENST00000519955 PPP1R37O75864 691 aa13.05□□□□□ -0.32
NPM1-206ENST00000519955 IER5LQ5T953 404 aa13.05□□□□□ -0.32
NPM1-206ENST00000519955 LCE2DQ5TA82 110 aaPredicted RBP13□□□□□ -0.33
NPM1-206ENST00000519955 SLC39A7Q92504 469 aa12.99□□□□□ -0.33
NPM1-206ENST00000519955 C7P10643 843 aa12.97□□□□□ -0.33
NPM1-206ENST00000519955 IRX5P78411 483 aaPredicted RBP12.97□□□□□ -0.33
NPM1-206ENST00000519955 CADPS2Q86UW7 1296 aa12.97□□□□□ -0.33
NPM1-206ENST00000519955 OCEL1Q9H607 264 aa12.96□□□□□ -0.33
NPM1-206ENST00000519955 PDCD7Q8N8D1 485 aaKnown RBP12.94□□□□□ -0.34
NPM1-206ENST00000519955 PLCG2P16885 1265 aa12.93□□□□□ -0.34
NPM1-206ENST00000519955 POTEFA5A3E0 1075 aa12.91□□□□□ -0.34
NPM1-206ENST00000519955 WDR70Q9NW82 654 aa12.9□□□□□ -0.34
NPM1-206ENST00000519955 SEC24BO95487 1268 aa12.89□□□□□ -0.35
NPM1-206ENST00000519955 DPY19L2Q6NUT2 758 aa12.89□□□□□ -0.35
NPM1-206ENST00000519955 BCANQ96GW7 911 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms