RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 RASEFQ8IZ41 740 aa9.53□□□□□ -0.88
SDC2-204ENST00000519914 PELP1Q8IZL8 1130 aaKnown RBP9.53□□□□□ -0.88
SDC2-204ENST00000519914 CCDC61Q9Y6R9 512 aa9.52□□□□□ -0.89
SDC2-204ENST00000519914 KIF12Q96FN5 646 aa9.49□□□□□ -0.89
SDC2-204ENST00000519914 POTEB2H3BUK9 544 aa9.47□□□□□ -0.89
SDC2-204ENST00000519914 ATMINO43313 823 aaPredicted RBP9.47□□□□□ -0.89
SDC2-204ENST00000519914 MAP3K13O43283 966 aa9.46□□□□□ -0.9
SDC2-204ENST00000519914 ASTLQ6HA08 431 aaPredicted RBP9.45□□□□□ -0.9
SDC2-204ENST00000519914 TRPC6Q9Y210 931 aa9.45□□□□□ -0.9
SDC2-204ENST00000519914 METRNQ9UJH8 293 aa9.43□□□□□ -0.9
SDC2-204ENST00000519914 ATN1P54259 1190 aaPredicted RBP9.42□□□□□ -0.9
SDC2-204ENST00000519914 ZBTB47Q9UFB7 747 aaPredicted RBP9.42□□□□□ -0.9
SDC2-204ENST00000519914 NUBP1P53384 320 aa9.41□□□□□ -0.9
SDC2-204ENST00000519914 OTUD5Q96G74 571 aa9.41□□□□□ -0.9
SDC2-204ENST00000519914 SLC39A7Q92504 469 aa9.4□□□□□ -0.9
SDC2-204ENST00000519914 BMP2KQ9NSY1 1161 aaPredicted RBP9.39□□□□□ -0.91
SDC2-204ENST00000519914 C7P10643 843 aa9.38□□□□□ -0.91
SDC2-204ENST00000519914 PCDHB13Q9Y5F0 798 aa9.36□□□□□ -0.91
SDC2-204ENST00000519914 DCAF8Q5TAQ9 597 aa9.35□□□□□ -0.91
SDC2-204ENST00000519914 FAM212AQ96EL1 285 aa9.35□□□□□ -0.91
SDC2-204ENST00000519914 FBXO3Q9UK99 471 aa9.35□□□□□ -0.91
SDC2-204ENST00000519914 CCDC180Q9P1Z9 1646 aa9.33□□□□□ -0.92
SDC2-204ENST00000519914 POTEJP0CG39 1038 aa9.32□□□□□ -0.92
SDC2-204ENST00000519914 TIE1P35590 1138 aa9.32□□□□□ -0.92
SDC2-204ENST00000519914 TTLL13PA6NNM8 815 aa9.31□□□□□ -0.92
SDC2-204ENST00000519914 KLHL34Q8N239 644 aa9.31□□□□□ -0.92
SDC2-204ENST00000519914 IFNL1Q8IU54 200 aa9.31□□□□□ -0.92
SDC2-204ENST00000519914 PYGBP11216 843 aa9.29□□□□□ -0.92
SDC2-204ENST00000519914 POTEFA5A3E0 1075 aa9.28□□□□□ -0.92
SDC2-204ENST00000519914 SEC24BO95487 1268 aa9.28□□□□□ -0.92
SDC2-204ENST00000519914 VASPP50552 380 aaPredicted RBP9.28□□□□□ -0.92
SDC2-204ENST00000519914 SGIP1Q9BQI5 828 aa9.28□□□□□ -0.92
SDC2-204ENST00000519914 TRIM35Q9UPQ4 493 aa9.27□□□□□ -0.93
SDC2-204ENST00000519914 TMEM106CQ9BVX2 250 aa9.25□□□□□ -0.93
SDC2-204ENST00000519914 COLQQ9Y215 455 aaPredicted RBP9.25□□□□□ -0.93
SDC2-204ENST00000519914 MAMSTRQ6ZN01 415 aa9.24□□□□□ -0.93
SDC2-204ENST00000519914 SCUBE2Q9NQ36 999 aa9.23□□□□□ -0.93
SDC2-204ENST00000519914 PCDHB8Q9UN66 801 aa9.22□□□□□ -0.93
SDC2-204ENST00000519914 FAM163AQ96GL9 167 aaPredicted RBP9.18□□□□□ -0.94
SDC2-204ENST00000519914 POTEMA6NI47 508 aa9.17□□□□□ -0.94
SDC2-204ENST00000519914 PLSCR2Q9NRY7 297 aa9.17□□□□□ -0.94
SDC2-204ENST00000519914 GSE1Q14687 1217 aa9.16□□□□□ -0.94
SDC2-204ENST00000519914 IER5LQ5T953 404 aa9.16□□□□□ -0.94
SDC2-204ENST00000519914 ZCCHC6Q5VYS8 1495 aaKnown RBP9.15□□□□□ -0.94
SDC2-204ENST00000519914 PLCG2P16885 1265 aa9.14□□□□□ -0.95
SDC2-204ENST00000519914 POTEGQ6S5H5 508 aa9.14□□□□□ -0.95
SDC2-204ENST00000519914 IFNLR1Q8IU57 520 aaPredicted RBP9.12□□□□□ -0.95
SDC2-204ENST00000519914 CIZ1Q9ULV3 898 aaPredicted RBP9.12□□□□□ -0.95
SDC2-204ENST00000519914 IRX5P78411 483 aaPredicted RBP9.09□□□□□ -0.95
SDC2-204ENST00000519914 SPOCK2Q92563 424 aa9.09□□□□□ -0.95
SDC2-204ENST00000519914 ZNF467Q7Z7K2 595 aaPredicted RBP9.07□□□□□ -0.96
SDC2-204ENST00000519914 SLAIN1Q8ND83 568 aa9.07□□□□□ -0.96
SDC2-204ENST00000519914 OCEL1Q9H607 264 aa9.07□□□□□ -0.96
SDC2-204ENST00000519914 LCE2DQ5TA82 110 aaPredicted RBP9.06□□□□□ -0.96
SDC2-204ENST00000519914 GOLGA2Q08379 1002 aa9.05□□□□□ -0.96
SDC2-204ENST00000519914 CHRM1P11229 460 aaPredicted RBP9.05□□□□□ -0.96
SDC2-204ENST00000519914 PSEN1P49768 467 aa9.04□□□□□ -0.96
SDC2-204ENST00000519914 MKRN3Q13064 507 aaKnown RBP9.03□□□□□ -0.96
SDC2-204ENST00000519914 DCAF1Q9Y4B6 1507 aa9.01□□□□□ -0.97
SDC2-204ENST00000519914 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.98□□□□□ -0.972e-6■■□□□ 11.9
SDC2-204ENST00000519914 PDAP1Q13442 181 aaKnown RBP8.97□□□□□ -0.97
SDC2-204ENST00000519914 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.97□□□□□ -0.97
SDC2-204ENST00000519914 PDCD7Q8N8D1 485 aaKnown RBP8.96□□□□□ -0.98
SDC2-204ENST00000519914 CABP2Q9NPB3 220 aa8.96□□□□□ -0.98
SDC2-204ENST00000519914 ST18O60284 1047 aa8.94□□□□□ -0.98
SDC2-204ENST00000519914 DPY19L2Q6NUT2 758 aa8.92□□□□□ -0.98
SDC2-204ENST00000519914 L3MBTL3Q96JM7 780 aaPredicted RBP8.92□□□□□ -0.98
SDC2-204ENST00000519914 PCDH10Q9P2E7 1040 aa8.92□□□□□ -0.98
SDC2-204ENST00000519914 C3orf67Q6ZVT6 689 aa8.91□□□□□ -0.98
SDC2-204ENST00000519914 CDAN1Q8IWY9 1227 aa8.88□□□□□ -0.99
SDC2-204ENST00000519914 SNPHO15079 494 aa8.86□□□□□ -0.99
SDC2-204ENST00000519914 G3V3G9 751 aa8.85□□□□□ -0.99
SDC2-204ENST00000519914 EFCAB3Q8N7B9 438 aa8.84□□□□□ -0.99
SDC2-204ENST00000519914 TRIM41Q8WV44 630 aa8.84□□□□□ -0.99
SDC2-204ENST00000519914 MARVELD3Q96A59 401 aa8.84□□□□□ -0.99
SDC2-204ENST00000519914 BOLA1Q9Y3E2 137 aa8.82□□□□□ -1
SDC2-204ENST00000519914 ILDR1Q86SU0 546 aaPredicted RBP8.81□□□□□ -1
SDC2-204ENST00000519914 MYO15BQ96JP2 1530 aa8.81□□□□□ -1
SDC2-204ENST00000519914 SHROOM4Q9ULL8 1493 aa8.81□□□□□ -1
SDC2-204ENST00000519914 RIOK3O14730 519 aaKnown RBP8.8□□□□□ -1
SDC2-204ENST00000519914 RNF25Q96BH1 459 aaPredicted RBP8.79□□□□□ -1
SDC2-204ENST00000519914 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.78□□□□□ -1
SDC2-204ENST00000519914 ZFP91Q96JP5 570 aaPredicted RBP8.78□□□□□ -1
SDC2-204ENST00000519914 TMEM121BQ9BXQ6 578 aaPredicted RBP8.78□□□□□ -1
SDC2-204ENST00000519914 EMP3P54852 163 aa8.75□□□□□ -1.01
SDC2-204ENST00000519914 VGFO15240 615 aaPredicted RBP8.74□□□□□ -1.01
SDC2-204ENST00000519914 FAM205CA6NFA0 338 aa8.72□□□□□ -1.01
SDC2-204ENST00000519914 PHF8Q9UPP1 1060 aa8.72□□□□□ -1.01
SDC2-204ENST00000519914 SOX12O15370 315 aa8.7□□□□□ -1.02
SDC2-204ENST00000519914 ZNF710Q8N1W2 664 aa8.69□□□□□ -1.02
SDC2-204ENST00000519914 POTEB3A0JP26 581 aa8.68□□□□□ -1.02
SDC2-204ENST00000519914 ECM2O94769 699 aaPredicted RBP8.68□□□□□ -1.02
SDC2-204ENST00000519914 HOXB3P14651 431 aaPredicted RBP8.68□□□□□ -1.02
SDC2-204ENST00000519914 POTEBQ6S5H4 581 aa8.68□□□□□ -1.02
SDC2-204ENST00000519914 MICALL2Q8IY33 904 aa8.68□□□□□ -1.02
SDC2-204ENST00000519914 MS4A4AQ96JQ5 239 aa8.68□□□□□ -1.02
SDC2-204ENST00000519914 HS3ST6Q96QI5 342 aa8.68□□□□□ -1.02
SDC2-204ENST00000519914 BCL11BQ9C0K0 894 aaPredicted RBP8.68□□□□□ -1.02
SDC2-204ENST00000519914 STK24Q9Y6E0 443 aa8.68□□□□□ -1.02
SDC2-204ENST00000519914 TMEM92Q6UXU6 159 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms