RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 GABBR2O75899 941 aa5.11□□□□□ -1.59
SCARNA3-201ENST00000517097 TIMELESSQ9UNS1 1208 aa5.11□□□□□ -1.59
SCARNA3-201ENST00000517097 CD44P16070 742 aaKnown RBP5.1□□□□□ -1.59
SCARNA3-201ENST00000517097 CREBZFQ9NS37 354 aa5.1□□□□□ -1.59
SCARNA3-201ENST00000517097 TULP1O00294 542 aaPredicted RBP5.09□□□□□ -1.59
SCARNA3-201ENST00000517097 ECM2O94769 699 aaPredicted RBP5.09□□□□□ -1.59
SCARNA3-201ENST00000517097 TSHZ2Q9NRE2 1034 aa5.08□□□□□ -1.6
SCARNA3-201ENST00000517097 STAG3Q9UJ98 1225 aa5.08□□□□□ -1.6
SCARNA3-201ENST00000517097 SPRYD3Q8NCJ5 442 aa5.07□□□□□ -1.6
SCARNA3-201ENST00000517097 SPOCK2Q92563 424 aa5.06□□□□□ -1.6
SCARNA3-201ENST00000517097 KLHL34Q8N239 644 aa5.05□□□□□ -1.6
SCARNA3-201ENST00000517097 ARXQ96QS3 562 aa5.05□□□□□ -1.6
SCARNA3-201ENST00000517097 DAXXQ9UER7 740 aaPredicted RBP5.05□□□□□ -1.6
SCARNA3-201ENST00000517097 GTF3C3Q9Y5Q9 886 aa5.05□□□□□ -1.6
SCARNA3-201ENST00000517097 RGL2O15211 777 aa5.04□□□□□ -1.6
SCARNA3-201ENST00000517097 NBR1Q14596 966 aa5.04□□□□□ -1.6
SCARNA3-201ENST00000517097 POTEIP0CG38 1075 aa5.02□□□□□ -1.61
SCARNA3-201ENST00000517097 MNX1P50219 401 aaPredicted RBP5.02□□□□□ -1.61
SCARNA3-201ENST00000517097 DNAJC5Q9H3Z4 198 aa5.02□□□□□ -1.61
SCARNA3-201ENST00000517097 ZRANB1Q9UGI0 708 aa5.02□□□□□ -1.61
SCARNA3-201ENST00000517097 ZNF579Q8NAF0 562 aaKnown RBP5.01□□□□□ -1.61
SCARNA3-201ENST00000517097 ERICH6Q7L0X2 663 aa5□□□□□ -1.61
SCARNA3-201ENST00000517097 GALR2O43603 387 aaPredicted RBP4.98□□□□□ -1.61
SCARNA3-201ENST00000517097 CHGAP10645 457 aaKnown RBP4.97□□□□□ -1.61
SCARNA3-201ENST00000517097 CLCN6P51797 869 aa4.97□□□□□ -1.61
SCARNA3-201ENST00000517097 LHX8Q68G74 356 aa4.97□□□□□ -1.61
SCARNA3-201ENST00000517097 PHF12Q96QT6 1004 aa4.97□□□□□ -1.61
SCARNA3-201ENST00000517097 TMEM132AQ24JP5 1023 aa4.96□□□□□ -1.62
SCARNA3-201ENST00000517097 PAK3O75914 559 aaPredicted RBP4.95□□□□□ -1.62
SCARNA3-201ENST00000517097 PLCD3Q8N3E9 789 aa4.94□□□□□ -1.62
SCARNA3-201ENST00000517097 DCBLD2Q96PD2 775 aa4.94□□□□□ -1.62
SCARNA3-201ENST00000517097 HOMEZQ8IX15 550 aa4.93□□□□□ -1.62
SCARNA3-201ENST00000517097 CIZ1Q9ULV3 898 aaPredicted RBP4.92□□□□□ -1.62
SCARNA3-201ENST00000517097 TSPYL2Q9H2G4 693 aaPredicted RBP4.91□□□□□ -1.62
SCARNA3-201ENST00000517097 C14orf37Q86TY3 774 aa4.9□□□□□ -1.63
SCARNA3-201ENST00000517097 HS6ST3Q8IZP7 471 aa4.9□□□□□ -1.63
SCARNA3-201ENST00000517097 MIER1Q8N108 512 aa4.9□□□□□ -1.63
SCARNA3-201ENST00000517097 MS4A3Q96HJ5 214 aa4.9□□□□□ -1.63
SCARNA3-201ENST00000517097 CCDC61Q9Y6R9 512 aa4.89□□□□□ -1.63
SCARNA3-201ENST00000517097 PELP1Q8IZL8 1130 aaKnown RBP4.88□□□□□ -1.63
SCARNA3-201ENST00000517097 RASEFQ8IZ41 740 aa4.87□□□□□ -1.63
SCARNA3-201ENST00000517097 TRIM41Q8WV44 630 aa4.87□□□□□ -1.63
SCARNA3-201ENST00000517097 POTEB2H3BUK9 544 aa4.86□□□□□ -1.63
SCARNA3-201ENST00000517097 PLEKHG5O94827 1062 aa4.86□□□□□ -1.63
SCARNA3-201ENST00000517097 NKX1-1Q15270 411 aaPredicted RBP4.86□□□□□ -1.63
SCARNA3-201ENST00000517097 ASTLQ6HA08 431 aaPredicted RBP4.86□□□□□ -1.63
SCARNA3-201ENST00000517097 KIF12Q96FN5 646 aa4.86□□□□□ -1.63
SCARNA3-201ENST00000517097 ATMINO43313 823 aaPredicted RBP4.85□□□□□ -1.63
SCARNA3-201ENST00000517097 TRPC6Q9Y210 931 aa4.85□□□□□ -1.63
SCARNA3-201ENST00000517097 GTPBP6O43824 516 aaPredicted RBP4.84□□□□□ -1.63
SCARNA3-201ENST00000517097 ZBTB47Q9UFB7 747 aaPredicted RBP4.84□□□□□ -1.63
SCARNA3-201ENST00000517097 MAP3K13O43283 966 aa4.83□□□□□ -1.64
SCARNA3-201ENST00000517097 NUBP1P53384 320 aa4.83□□□□□ -1.64
SCARNA3-201ENST00000517097 RNF25Q96BH1 459 aaPredicted RBP4.83□□□□□ -1.64
SCARNA3-201ENST00000517097 OTUD5Q96G74 571 aa4.83□□□□□ -1.64
SCARNA3-201ENST00000517097 ATN1P54259 1190 aaPredicted RBP4.82□□□□□ -1.64
SCARNA3-201ENST00000517097 METRNQ9UJH8 293 aa4.82□□□□□ -1.64
SCARNA3-201ENST00000517097 BMP2KQ9NSY1 1161 aaPredicted RBP4.81□□□□□ -1.64
SCARNA3-201ENST00000517097 POTEJP0CG39 1038 aa4.8□□□□□ -1.64
SCARNA3-201ENST00000517097 SLC39A7Q92504 469 aa4.8□□□□□ -1.64
SCARNA3-201ENST00000517097 C7P10643 843 aa4.79□□□□□ -1.64
SCARNA3-201ENST00000517097 GSE1Q14687 1217 aa4.79□□□□□ -1.64
SCARNA3-201ENST00000517097 POTEFA5A3E0 1075 aa4.78□□□□□ -1.64
SCARNA3-201ENST00000517097 SUPT5HO00267 1087 aaKnown RBP4.78□□□□□ -1.64
SCARNA3-201ENST00000517097 RIOK3O14730 519 aaKnown RBP4.78□□□□□ -1.64
SCARNA3-201ENST00000517097 TIE1P35590 1138 aa4.78□□□□□ -1.64
SCARNA3-201ENST00000517097 LMOD2Q6P5Q4 547 aa4.78□□□□□ -1.64
SCARNA3-201ENST00000517097 TTLL13PA6NNM8 815 aa4.77□□□□□ -1.65
SCARNA3-201ENST00000517097 BRPF1P55201 1214 aaPredicted RBP4.77□□□□□ -1.65
SCARNA3-201ENST00000517097 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.77□□□□□ -1.65
SCARNA3-201ENST00000517097 P3H3Q8IVL6 736 aa4.77□□□□□ -1.65
SCARNA3-201ENST00000517097 FAM212AQ96EL1 285 aa4.77□□□□□ -1.65
SCARNA3-201ENST00000517097 PCDHB13Q9Y5F0 798 aa4.77□□□□□ -1.65
SCARNA3-201ENST00000517097 STK25O00506 426 aa4.76□□□□□ -1.65
SCARNA3-201ENST00000517097 IFNL1Q8IU54 200 aa4.76□□□□□ -1.65
SCARNA3-201ENST00000517097 SGIP1Q9BQI5 828 aa4.75□□□□□ -1.65
SCARNA3-201ENST00000517097 VGFO15240 615 aaPredicted RBP4.74□□□□□ -1.65
SCARNA3-201ENST00000517097 TRIM35Q9UPQ4 493 aa4.74□□□□□ -1.65
SCARNA3-201ENST00000517097 COLQQ9Y215 455 aaPredicted RBP4.74□□□□□ -1.65
SCARNA3-201ENST00000517097 PYGBP11216 843 aa4.73□□□□□ -1.65
SCARNA3-201ENST00000517097 DCAF8Q5TAQ9 597 aa4.73□□□□□ -1.65
SCARNA3-201ENST00000517097 KCNV2Q8TDN2 545 aa4.73□□□□□ -1.65
SCARNA3-201ENST00000517097 RYDENQ9NUL5 291 aaKnown RBP4.73□□□□□ -1.65
SCARNA3-201ENST00000517097 PODXL2Q9NZ53 605 aa4.73□□□□□ -1.65
SCARNA3-201ENST00000517097 NEUROD2Q15784 382 aa4.71□□□□□ -1.66
SCARNA3-201ENST00000517097 TMEM106CQ9BVX2 250 aa4.71□□□□□ -1.66
SCARNA3-201ENST00000517097 BCL11BQ9C0K0 894 aaPredicted RBP4.71□□□□□ -1.66
SCARNA3-201ENST00000517097 WDR70Q9NW82 654 aa4.71□□□□□ -1.66
SCARNA3-201ENST00000517097 STK24Q9Y6E0 443 aa4.71□□□□□ -1.66
SCARNA3-201ENST00000517097 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.7□□□□□ -1.66
SCARNA3-201ENST00000517097 SEC24BO95487 1268 aa4.7□□□□□ -1.66
SCARNA3-201ENST00000517097 IER5LQ5T953 404 aa4.7□□□□□ -1.66
SCARNA3-201ENST00000517097 MAMSTRQ6ZN01 415 aa4.7□□□□□ -1.66
SCARNA3-201ENST00000517097 ZC3H15Q8WU90 426 aaKnown RBP4.7□□□□□ -1.66
SCARNA3-201ENST00000517097 ZFP91Q96JP5 570 aaPredicted RBP4.7□□□□□ -1.66
SCARNA3-201ENST00000517097 LCE2DQ5TA82 110 aaPredicted RBP4.69□□□□□ -1.66
SCARNA3-201ENST00000517097 SCUBE2Q9NQ36 999 aa4.69□□□□□ -1.66
SCARNA3-201ENST00000517097 PCDHB8Q9UN66 801 aa4.69□□□□□ -1.66
SCARNA3-201ENST00000517097 POTEMA6NI47 508 aa4.68□□□□□ -1.66
SCARNA3-201ENST00000517097 CHRM1P11229 460 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms