RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 NUBP1P53384 320 aa6.03□□□□□ -1.44
RNF4-219ENST00000513450 GSE1Q14687 1217 aa6.03□□□□□ -1.44
RNF4-219ENST00000513450 TRIM41Q8WV44 630 aa6.03□□□□□ -1.44
RNF4-219ENST00000513450 NPM1P06748 294 aaKnown RBP eCLIP6.02□□□□□ -1.45
RNF4-219ENST00000513450 CIZ1Q9ULV3 898 aaPredicted RBP6.02□□□□□ -1.45
RNF4-219ENST00000513450 FARP1Q9Y4F1 1045 aaPredicted RBP6.02□□□□□ -1.45
RNF4-219ENST00000513450 CLCN6P51797 869 aa6.01□□□□□ -1.45
RNF4-219ENST00000513450 FAM212AQ96EL1 285 aa5.99□□□□□ -1.45
RNF4-219ENST00000513450 POTEMA6NI47 508 aa5.98□□□□□ -1.45
RNF4-219ENST00000513450 DCAF8L2P0C7V8 631 aa5.98□□□□□ -1.45
RNF4-219ENST00000513450 DCAF8Q5TAQ9 597 aa5.98□□□□□ -1.45
RNF4-219ENST00000513450 ZRANB1Q9UGI0 708 aa5.97□□□□□ -1.45
RNF4-219ENST00000513450 SLC24A1O60721 1099 aa5.96□□□□□ -1.46
RNF4-219ENST00000513450 RGL2O15211 777 aa5.95□□□□□ -1.46
RNF4-219ENST00000513450 RASEFQ8IZ41 740 aa5.95□□□□□ -1.46
RNF4-219ENST00000513450 POTEGQ6S5H5 508 aa5.94□□□□□ -1.46
RNF4-219ENST00000513450 ZNF579Q8NAF0 562 aaKnown RBP5.94□□□□□ -1.46
RNF4-219ENST00000513450 OTUD5Q96G74 571 aa5.94□□□□□ -1.46
RNF4-219ENST00000513450 CHRM1P11229 460 aaPredicted RBP5.93□□□□□ -1.46
RNF4-219ENST00000513450 GALR2O43603 387 aaPredicted RBP5.92□□□□□ -1.46
RNF4-219ENST00000513450 TAOK2Q9UL54 1235 aa5.91□□□□□ -1.46
RNF4-219ENST00000513450 POTEB2H3BUK9 544 aa5.89□□□□□ -1.47
RNF4-219ENST00000513450 RIOK3O14730 519 aaKnown RBP5.89□□□□□ -1.47
RNF4-219ENST00000513450 PLCB2Q00722 1185 aa5.89□□□□□ -1.47
RNF4-219ENST00000513450 BBXQ8WY36 941 aaPredicted RBP5.89□□□□□ -1.47
RNF4-219ENST00000513450 PAK3O75914 559 aaPredicted RBP5.88□□□□□ -1.47
RNF4-219ENST00000513450 RNF25Q96BH1 459 aaPredicted RBP5.88□□□□□ -1.47
RNF4-219ENST00000513450 TSPYL2Q9H2G4 693 aaPredicted RBP5.88□□□□□ -1.47
RNF4-219ENST00000513450 PYGBP11216 843 aa5.87□□□□□ -1.47
RNF4-219ENST00000513450 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.87□□□□□ -1.47
RNF4-219ENST00000513450 VGFO15240 615 aaPredicted RBP5.86□□□□□ -1.47
RNF4-219ENST00000513450 CHGAP10645 457 aaKnown RBP5.86□□□□□ -1.47
RNF4-219ENST00000513450 HS6ST3Q8IZP7 471 aa5.85□□□□□ -1.47
RNF4-219ENST00000513450 SGIP1Q9BQI5 828 aa5.85□□□□□ -1.47
RNF4-219ENST00000513450 PCDH10Q9P2E7 1040 aa5.85□□□□□ -1.47
RNF4-219ENST00000513450 CCDC61Q9Y6R9 512 aa5.85□□□□□ -1.47
RNF4-219ENST00000513450 PHF12Q96QT6 1004 aa5.84□□□□□ -1.47
RNF4-219ENST00000513450 DNAJC5Q9H3Z4 198 aa5.84□□□□□ -1.47
RNF4-219ENST00000513450 ZNF467Q7Z7K2 595 aaPredicted RBP5.83□□□□□ -1.48
RNF4-219ENST00000513450 FAM163AQ96GL9 167 aaPredicted RBP5.81□□□□□ -1.48
RNF4-219ENST00000513450 STK25O00506 426 aa5.8□□□□□ -1.48
RNF4-219ENST00000513450 PAXIP1Q6ZW49 1069 aaPredicted RBP5.8□□□□□ -1.48
RNF4-219ENST00000513450 PELP1Q8IZL8 1130 aaKnown RBP5.8□□□□□ -1.48
RNF4-219ENST00000513450 SPRYD3Q8NCJ5 442 aa5.8□□□□□ -1.48
RNF4-219ENST00000513450 METRNQ9UJH8 293 aa5.8□□□□□ -1.48
RNF4-219ENST00000513450 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.79□□□□□ -1.48
RNF4-219ENST00000513450 ZFP91Q96JP5 570 aaPredicted RBP5.79□□□□□ -1.48
RNF4-219ENST00000513450 HAP1P54257 671 aaPredicted RBP5.78□□□□□ -1.48
RNF4-219ENST00000513450 PDAP1Q13442 181 aaKnown RBP5.78□□□□□ -1.48
RNF4-219ENST00000513450 MAMSTRQ6ZN01 415 aa5.78□□□□□ -1.48
RNF4-219ENST00000513450 SLC39A7Q92504 469 aa5.78□□□□□ -1.48
RNF4-219ENST00000513450 KIF12Q96FN5 646 aa5.78□□□□□ -1.48
RNF4-219ENST00000513450 CFAP44Q96MT7 982 aa5.78□□□□□ -1.48
RNF4-219ENST00000513450 BCL11BQ9C0K0 894 aaPredicted RBP5.77□□□□□ -1.49
RNF4-219ENST00000513450 PCDHB13Q9Y5F0 798 aa5.77□□□□□ -1.49
RNF4-219ENST00000513450 STK24Q9Y6E0 443 aa5.77□□□□□ -1.49
RNF4-219ENST00000513450 MAP3K13O43283 966 aa5.76□□□□□ -1.49
RNF4-219ENST00000513450 SCUBE2Q9NQ36 999 aa5.76□□□□□ -1.49
RNF4-219ENST00000513450 PCDHB8Q9UN66 801 aa5.76□□□□□ -1.49
RNF4-219ENST00000513450 C7P10643 843 aa5.75□□□□□ -1.49
RNF4-219ENST00000513450 IFNL1Q8IU54 200 aa5.75□□□□□ -1.49
RNF4-219ENST00000513450 MS4A3Q96HJ5 214 aa5.75□□□□□ -1.49
RNF4-219ENST00000513450 RYDENQ9NUL5 291 aaKnown RBP5.75□□□□□ -1.49
RNF4-219ENST00000513450 ATMINO43313 823 aaPredicted RBP5.74□□□□□ -1.49
RNF4-219ENST00000513450 PSEN1P49768 467 aa5.74□□□□□ -1.49
RNF4-219ENST00000513450 NKX1-1Q15270 411 aaPredicted RBP5.74□□□□□ -1.49
RNF4-219ENST00000513450 VSIG10Q8N0Z9 540 aa5.74□□□□□ -1.49
RNF4-219ENST00000513450 POTEJP0CG39 1038 aa5.73□□□□□ -1.49
RNF4-219ENST00000513450 ASTLQ6HA08 431 aaPredicted RBP5.73□□□□□ -1.49
RNF4-219ENST00000513450 GTPBP6O43824 516 aaPredicted RBP5.71□□□□□ -1.5
RNF4-219ENST00000513450 LCE2DQ5TA82 110 aaPredicted RBP5.71□□□□□ -1.5
RNF4-219ENST00000513450 ATN1P54259 1190 aaPredicted RBP5.68□□□□□ -1.5
RNF4-219ENST00000513450 CDAN1Q8IWY9 1227 aa5.68□□□□□ -1.5
RNF4-219ENST00000513450 TSHZ2Q9NRE2 1034 aa5.68□□□□□ -1.5
RNF4-219ENST00000513450 SOX12O15370 315 aa5.67□□□□□ -1.5
RNF4-219ENST00000513450 CABP2Q9NPB3 220 aa5.66□□□□□ -1.5
RNF4-219ENST00000513450 TIE1P35590 1138 aa5.65□□□□□ -1.5
RNF4-219ENST00000513450 EFCAB3Q8N7B9 438 aa5.65□□□□□ -1.5
RNF4-219ENST00000513450 TMEM106CQ9BVX2 250 aa5.65□□□□□ -1.5
RNF4-219ENST00000513450 NLRP6P59044 892 aa5.64□□□□□ -1.51
RNF4-219ENST00000513450 MFRPQ9BY79 579 aa5.64□□□□□ -1.51
RNF4-219ENST00000513450 KDM2AQ9Y2K7 1162 aa5.64□□□□□ -1.51
RNF4-219ENST00000513450 SEC24BO95487 1268 aa5.63□□□□□ -1.51
RNF4-219ENST00000513450 GOLGA2Q08379 1002 aa5.63□□□□□ -1.51
RNF4-219ENST00000513450 TRPC6Q9Y210 931 aa5.63□□□□□ -1.51
RNF4-219ENST00000513450 TTLL13PA6NNM8 815 aa5.62□□□□□ -1.51
RNF4-219ENST00000513450 FBXO22Q8NEZ5 403 aa5.62□□□□□ -1.51
RNF4-219ENST00000513450 POTEFA5A3E0 1075 aa5.61□□□□□ -1.51
RNF4-219ENST00000513450 MKRN3Q13064 507 aaKnown RBP5.61□□□□□ -1.51
RNF4-219ENST00000513450 BMP2KQ9NSY1 1161 aaPredicted RBP5.61□□□□□ -1.51
RNF4-219ENST00000513450 PHF8Q9UPP1 1060 aa5.61□□□□□ -1.51
RNF4-219ENST00000513450 BCANQ96GW7 911 aa5.58□□□□□ -1.52
RNF4-219ENST00000513450 TRIM35Q9UPQ4 493 aa5.58□□□□□ -1.52
RNF4-219ENST00000513450 ILDR1Q86SU0 546 aaPredicted RBP5.57□□□□□ -1.52
RNF4-219ENST00000513450 SLAIN1Q8ND83 568 aa5.57□□□□□ -1.52
RNF4-219ENST00000513450 COLQQ9Y215 455 aaPredicted RBP5.57□□□□□ -1.52
RNF4-219ENST00000513450 ST18O60284 1047 aa5.56□□□□□ -1.52
RNF4-219ENST00000513450 PPP1R37O75864 691 aa5.56□□□□□ -1.52
RNF4-219ENST00000513450 MS4A4AQ96JQ5 239 aa5.56□□□□□ -1.52
RNF4-219ENST00000513450 MMRN1Q13201 1228 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms