RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-230ENST00000510599 ASTLQ6HA08 431 aaPredicted RBP12.49□□□□□ -0.41
UBE2D3-230ENST00000510599 RASEFQ8IZ41 740 aa12.49□□□□□ -0.41
UBE2D3-230ENST00000510599 KIF12Q96FN5 646 aa12.47□□□□□ -0.41
UBE2D3-230ENST00000510599 ATMINO43313 823 aaPredicted RBP12.45□□□□□ -0.42
UBE2D3-230ENST00000510599 PELP1Q8IZL8 1130 aaKnown RBP12.45□□□□□ -0.42
UBE2D3-230ENST00000510599 SLC39A7Q92504 469 aa12.43□□□□□ -0.42
UBE2D3-230ENST00000510599 METRNQ9UJH8 293 aa12.42□□□□□ -0.42
UBE2D3-230ENST00000510599 MAP3K13O43283 966 aa12.4□□□□□ -0.42
UBE2D3-230ENST00000510599 C7P10643 843 aa12.4□□□□□ -0.42
UBE2D3-230ENST00000510599 FBXO3Q9UK99 471 aa12.39□□□□□ -0.43
UBE2D3-230ENST00000510599 POTEB2H3BUK9 544 aa12.37□□□□□ -0.43
UBE2D3-230ENST00000510599 NUBP1P53384 320 aa12.37□□□□□ -0.43
UBE2D3-230ENST00000510599 ATN1P54259 1190 aaPredicted RBP12.36□□□□□ -0.43
UBE2D3-230ENST00000510599 FAM212AQ96EL1 285 aa12.36□□□□□ -0.43
UBE2D3-230ENST00000510599 TIE1P35590 1138 aa12.35□□□□□ -0.43
UBE2D3-230ENST00000510599 OTUD5Q96G74 571 aa12.35□□□□□ -0.43
UBE2D3-230ENST00000510599 BMP2KQ9NSY1 1161 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-230ENST00000510599 SGIP1Q9BQI5 828 aa12.33□□□□□ -0.44
UBE2D3-230ENST00000510599 TRPC6Q9Y210 931 aa12.32□□□□□ -0.44
UBE2D3-230ENST00000510599 PCDHB13Q9Y5F0 798 aa12.3□□□□□ -0.44
UBE2D3-230ENST00000510599 TTLL13PA6NNM8 815 aa12.26□□□□□ -0.45
UBE2D3-230ENST00000510599 MAMSTRQ6ZN01 415 aa12.26□□□□□ -0.45
UBE2D3-230ENST00000510599 DCAF8Q5TAQ9 597 aa12.21□□□□□ -0.45
UBE2D3-230ENST00000510599 IFNL1Q8IU54 200 aa12.21□□□□□ -0.45
UBE2D3-230ENST00000510599 VASPP50552 380 aaPredicted RBP12.2□□□□□ -0.46
UBE2D3-230ENST00000510599 SCUBE2Q9NQ36 999 aa12.2□□□□□ -0.46
UBE2D3-230ENST00000510599 TRIM35Q9UPQ4 493 aa12.2□□□□□ -0.46
UBE2D3-230ENST00000510599 POTEJP0CG39 1038 aa12.19□□□□□ -0.46
UBE2D3-230ENST00000510599 SEC24BO95487 1268 aa12.18□□□□□ -0.46
UBE2D3-230ENST00000510599 IER5LQ5T953 404 aa12.18□□□□□ -0.46
UBE2D3-230ENST00000510599 POTEFA5A3E0 1075 aa12.17□□□□□ -0.46
UBE2D3-230ENST00000510599 KLHL34Q8N239 644 aa12.17□□□□□ -0.46
UBE2D3-230ENST00000510599 PYGBP11216 843 aa12.14□□□□□ -0.47
UBE2D3-230ENST00000510599 TMEM106CQ9BVX2 250 aa12.14□□□□□ -0.47
UBE2D3-230ENST00000510599 GSE1Q14687 1217 aa12.11□□□□□ -0.47
UBE2D3-230ENST00000510599 COLQQ9Y215 455 aaPredicted RBP12.11□□□□□ -0.47
UBE2D3-230ENST00000510599 POTEMA6NI47 508 aa12.06□□□□□ -0.48
UBE2D3-230ENST00000510599 PLCG2P16885 1265 aa12.04□□□□□ -0.48
UBE2D3-230ENST00000510599 PCDHB8Q9UN66 801 aa12.03□□□□□ -0.48
UBE2D3-230ENST00000510599 POTEGQ6S5H5 508 aa12.02□□□□□ -0.49
UBE2D3-230ENST00000510599 ZNF467Q7Z7K2 595 aaPredicted RBP12.02□□□□□ -0.49
UBE2D3-230ENST00000510599 IRX5P78411 483 aaPredicted RBP11.99□□□□□ -0.49
UBE2D3-230ENST00000510599 PLSCR2Q9NRY7 297 aa11.97□□□□□ -0.49
UBE2D3-230ENST00000510599 CHRM1P11229 460 aaPredicted RBP11.96□□□□□ -0.49
UBE2D3-230ENST00000510599 SPOCK2Q92563 424 aa11.96□□□□□ -0.49
UBE2D3-230ENST00000510599 FAM163AQ96GL9 167 aaPredicted RBP11.95□□□□□ -0.5
UBE2D3-230ENST00000510599 OCEL1Q9H607 264 aa11.95□□□□□ -0.5
UBE2D3-230ENST00000510599 IFNLR1Q8IU57 520 aaPredicted RBP11.94□□□□□ -0.5
UBE2D3-230ENST00000510599 GOLGA2Q08379 1002 aa11.92□□□□□ -0.5
UBE2D3-230ENST00000510599 LCE2DQ5TA82 110 aaPredicted RBP11.91□□□□□ -0.5
UBE2D3-230ENST00000510599 SLAIN1Q8ND83 568 aa11.91□□□□□ -0.5
UBE2D3-230ENST00000510599 PCDH10Q9P2E7 1040 aa11.9□□□□□ -0.5
UBE2D3-230ENST00000510599 CIZ1Q9ULV3 898 aaPredicted RBP11.9□□□□□ -0.5
UBE2D3-230ENST00000510599 MKRN3Q13064 507 aaKnown RBP11.88□□□□□ -0.51
UBE2D3-230ENST00000510599 PSEN1P49768 467 aa11.87□□□□□ -0.51
UBE2D3-230ENST00000510599 PDAP1Q13442 181 aaKnown RBP11.84□□□□□ -0.51
UBE2D3-230ENST00000510599 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.82□□□□□ -0.52
UBE2D3-230ENST00000510599 PDCD7Q8N8D1 485 aaKnown RBP11.8□□□□□ -0.52
UBE2D3-230ENST00000510599 TRIM41Q8WV44 630 aa11.78□□□□□ -0.52
UBE2D3-230ENST00000510599 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.78□□□□□ -0.52
UBE2D3-230ENST00000510599 C3orf67Q6ZVT6 689 aa11.77□□□□□ -0.53
UBE2D3-230ENST00000510599 L3MBTL3Q96JM7 780 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-230ENST00000510599 SNPHO15079 494 aa11.74□□□□□ -0.53
UBE2D3-230ENST00000510599 ST18O60284 1047 aa11.74□□□□□ -0.53
UBE2D3-230ENST00000510599 CABP2Q9NPB3 220 aa11.73□□□□□ -0.53
UBE2D3-230ENST00000510599 ILDR1Q86SU0 546 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-230ENST00000510599 TMEM121BQ9BXQ6 578 aaPredicted RBP11.68□□□□□ -0.54
UBE2D3-230ENST00000510599 G3V3G9 751 aa11.67□□□□□ -0.54
UBE2D3-230ENST00000510599 CDAN1Q8IWY9 1227 aa11.66□□□□□ -0.54
UBE2D3-230ENST00000510599 DPY19L2Q6NUT2 758 aa11.61□□□□□ -0.55
UBE2D3-230ENST00000510599 BOLA1Q9Y3E2 137 aa11.61□□□□□ -0.55
UBE2D3-230ENST00000510599 RIOK3O14730 519 aaKnown RBP11.59□□□□□ -0.55
UBE2D3-230ENST00000510599 EFCAB3Q8N7B9 438 aa11.58□□□□□ -0.56
UBE2D3-230ENST00000510599 VGFO15240 615 aaPredicted RBP11.55□□□□□ -0.56
UBE2D3-230ENST00000510599 MARVELD3Q96A59 401 aa11.54□□□□□ -0.56
UBE2D3-230ENST00000510599 RNF25Q96BH1 459 aaPredicted RBP11.54□□□□□ -0.56
UBE2D3-230ENST00000510599 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-230ENST00000510599 EMP3P54852 163 aa11.51□□□□□ -0.57
UBE2D3-230ENST00000510599 ZFP91Q96JP5 570 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-230ENST00000510599 SOX12O15370 315 aa11.49□□□□□ -0.57
UBE2D3-230ENST00000510599 TAOK2Q9UL54 1235 aa11.49□□□□□ -0.57
UBE2D3-230ENST00000510599 MICALL2Q8IY33 904 aa11.44□□□□□ -0.58
UBE2D3-230ENST00000510599 DOK7Q18PE1 504 aa11.43□□□□□ -0.58
UBE2D3-230ENST00000510599 HOXB3P14651 431 aaPredicted RBP11.42□□□□□ -0.58
UBE2D3-230ENST00000510599 ZNF710Q8N1W2 664 aa11.42□□□□□ -0.58
UBE2D3-230ENST00000510599 HS3ST6Q96QI5 342 aa11.41□□□□□ -0.58
UBE2D3-230ENST00000510599 PHF8Q9UPP1 1060 aa11.41□□□□□ -0.58
UBE2D3-230ENST00000510599 FAM205CA6NFA0 338 aa11.4□□□□□ -0.58
UBE2D3-230ENST00000510599 MS4A4AQ96JQ5 239 aa11.4□□□□□ -0.58
UBE2D3-230ENST00000510599 RIMBP2O15034 1052 aa11.39□□□□□ -0.59
UBE2D3-230ENST00000510599 BCL11BQ9C0K0 894 aaPredicted RBP11.39□□□□□ -0.59
UBE2D3-230ENST00000510599 ECM2O94769 699 aaPredicted RBP11.37□□□□□ -0.59
UBE2D3-230ENST00000510599 NLRP6P59044 892 aa11.37□□□□□ -0.59
UBE2D3-230ENST00000510599 HOXB1P14653 301 aaPredicted RBP11.36□□□□□ -0.59
UBE2D3-230ENST00000510599 SPNS2Q8IVW8 549 aa11.36□□□□□ -0.59
UBE2D3-230ENST00000510599 STK24Q9Y6E0 443 aa11.36□□□□□ -0.59
UBE2D3-230ENST00000510599 MMRN1Q13201 1228 aa11.34□□□□□ -0.59
UBE2D3-230ENST00000510599 STK25O00506 426 aa11.33□□□□□ -0.6
UBE2D3-230ENST00000510599 TMEM92Q6UXU6 159 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms