RNA–Protein interactions for RNA: ENST00000509234.1

TRAPPC13-210, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-210ENST00000509234 PLEKHG5O94827 1062 aa11.1□□□□□ -0.63
TRAPPC13-210ENST00000509234 OTUD5Q96G74 571 aa11.1□□□□□ -0.63
TRAPPC13-210ENST00000509234 SLC24A1O60721 1099 aa11.09□□□□□ -0.63
TRAPPC13-210ENST00000509234 ZRANB1Q9UGI0 708 aa11.08□□□□□ -0.64
TRAPPC13-210ENST00000509234 POTEMA6NI47 508 aa11.07□□□□□ -0.64
TRAPPC13-210ENST00000509234 NUBP1P53384 320 aa11.07□□□□□ -0.64
TRAPPC13-210ENST00000509234 ZNF579Q8NAF0 562 aaKnown RBP11.06□□□□□ -0.64
TRAPPC13-210ENST00000509234 ECM2O94769 699 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC13-210ENST00000509234 POTEGQ6S5H5 508 aa11.02□□□□□ -0.65
TRAPPC13-210ENST00000509234 POTEB2H3BUK9 544 aa11.01□□□□□ -0.65
TRAPPC13-210ENST00000509234 GALR2O43603 387 aaPredicted RBP11□□□□□ -0.65
TRAPPC13-210ENST00000509234 RGL2O15211 777 aa10.98□□□□□ -0.65
TRAPPC13-210ENST00000509234 TRIM41Q8WV44 630 aa10.97□□□□□ -0.65
TRAPPC13-210ENST00000509234 GSE1Q14687 1217 aa10.94□□□□□ -0.66
TRAPPC13-210ENST00000509234 CIZ1Q9ULV3 898 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC13-210ENST00000509234 PCDH10Q9P2E7 1040 aa10.93□□□□□ -0.66
TRAPPC13-210ENST00000509234 RASEFQ8IZ41 740 aa10.91□□□□□ -0.66
TRAPPC13-210ENST00000509234 NPM1P06748 294 aaKnown RBP eCLIP10.9□□□□□ -0.66
TRAPPC13-210ENST00000509234 RNF25Q96BH1 459 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC13-210ENST00000509234 PLCB2Q00722 1185 aa10.89□□□□□ -0.67
TRAPPC13-210ENST00000509234 PAK3O75914 559 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC13-210ENST00000509234 CHRM1P11229 460 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC13-210ENST00000509234 PELP1Q8IZL8 1130 aaKnown RBP10.86□□□□□ -0.67
TRAPPC13-210ENST00000509234 FAM212AQ96EL1 285 aa10.86□□□□□ -0.67
TRAPPC13-210ENST00000509234 PHF12Q96QT6 1004 aa10.85□□□□□ -0.67
TRAPPC13-210ENST00000509234 DCAF8L2P0C7V8 631 aa10.84□□□□□ -0.67
TRAPPC13-210ENST00000509234 DCAF8Q5TAQ9 597 aa10.84□□□□□ -0.67
TRAPPC13-210ENST00000509234 BBXQ8WY36 941 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC13-210ENST00000509234 DNAJC5Q9H3Z4 198 aa10.81□□□□□ -0.68
TRAPPC13-210ENST00000509234 FAM163AQ96GL9 167 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC13-210ENST00000509234 HS6ST3Q8IZP7 471 aa10.77□□□□□ -0.69
TRAPPC13-210ENST00000509234 METRNQ9UJH8 293 aa10.77□□□□□ -0.69
TRAPPC13-210ENST00000509234 RIOK3O14730 519 aaKnown RBP10.75□□□□□ -0.69
TRAPPC13-210ENST00000509234 C7P10643 843 aa10.75□□□□□ -0.69
TRAPPC13-210ENST00000509234 MAMSTRQ6ZN01 415 aa10.75□□□□□ -0.69
TRAPPC13-210ENST00000509234 SGIP1Q9BQI5 828 aa10.75□□□□□ -0.69
TRAPPC13-210ENST00000509234 POTEJP0CG39 1038 aa10.74□□□□□ -0.69
TRAPPC13-210ENST00000509234 SLC39A7Q92504 469 aa10.74□□□□□ -0.69
TRAPPC13-210ENST00000509234 CHGAP10645 457 aaKnown RBP10.71□□□□□ -0.69
TRAPPC13-210ENST00000509234 CCDC61Q9Y6R9 512 aa10.71□□□□□ -0.69
TRAPPC13-210ENST00000509234 ATMINO43313 823 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC13-210ENST00000509234 PYGBP11216 843 aa10.7□□□□□ -0.7
TRAPPC13-210ENST00000509234 ASTLQ6HA08 431 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC13-210ENST00000509234 VGFO15240 615 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC13-210ENST00000509234 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC13-210ENST00000509234 LCE2DQ5TA82 110 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC13-210ENST00000509234 MS4A3Q96HJ5 214 aa10.66□□□□□ -0.7
TRAPPC13-210ENST00000509234 TSPYL2Q9H2G4 693 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC13-210ENST00000509234 SCUBE2Q9NQ36 999 aa10.66□□□□□ -0.7
TRAPPC13-210ENST00000509234 TAOK2Q9UL54 1235 aa10.66□□□□□ -0.7
TRAPPC13-210ENST00000509234 NKX1-1Q15270 411 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC13-210ENST00000509234 PAXIP1Q6ZW49 1069 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC13-210ENST00000509234 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC13-210ENST00000509234 HAP1P54257 671 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC13-210ENST00000509234 SPRYD3Q8NCJ5 442 aa10.61□□□□□ -0.71
TRAPPC13-210ENST00000509234 ZFP91Q96JP5 570 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC13-210ENST00000509234 ZNF467Q7Z7K2 595 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC13-210ENST00000509234 STK25O00506 426 aa10.58□□□□□ -0.72
TRAPPC13-210ENST00000509234 VSIG10Q8N0Z9 540 aa10.57□□□□□ -0.72
TRAPPC13-210ENST00000509234 CFAP44Q96MT7 982 aa10.57□□□□□ -0.72
TRAPPC13-210ENST00000509234 ATN1P54259 1190 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC13-210ENST00000509234 KIF12Q96FN5 646 aa10.56□□□□□ -0.72
TRAPPC13-210ENST00000509234 BCL11BQ9C0K0 894 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC13-210ENST00000509234 GTPBP6O43824 516 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC13-210ENST00000509234 CDAN1Q8IWY9 1227 aa10.55□□□□□ -0.72
TRAPPC13-210ENST00000509234 PCDHB8Q9UN66 801 aa10.53□□□□□ -0.72
TRAPPC13-210ENST00000509234 PCDHB13Q9Y5F0 798 aa10.53□□□□□ -0.72
TRAPPC13-210ENST00000509234 PDAP1Q13442 181 aaKnown RBP10.52□□□□□ -0.73
TRAPPC13-210ENST00000509234 KDM2AQ9Y2K7 1162 aa10.52□□□□□ -0.73
TRAPPC13-210ENST00000509234 MAP3K13O43283 966 aa10.51□□□□□ -0.73
TRAPPC13-210ENST00000509234 IFNL1Q8IU54 200 aa10.51□□□□□ -0.73
TRAPPC13-210ENST00000509234 STK24Q9Y6E0 443 aa10.51□□□□□ -0.73
TRAPPC13-210ENST00000509234 TSHZ2Q9NRE2 1034 aa10.5□□□□□ -0.73
TRAPPC13-210ENST00000509234 POTEFA5A3E0 1075 aa10.48□□□□□ -0.73
TRAPPC13-210ENST00000509234 PSEN1P49768 467 aa10.46□□□□□ -0.73
TRAPPC13-210ENST00000509234 BMP2KQ9NSY1 1161 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC13-210ENST00000509234 SEC24BO95487 1268 aa10.43□□□□□ -0.74
TRAPPC13-210ENST00000509234 RYDENQ9NUL5 291 aaKnown RBP10.41□□□□□ -0.74
TRAPPC13-210ENST00000509234 TRPC6Q9Y210 931 aa10.4□□□□□ -0.74
TRAPPC13-210ENST00000509234 MFRPQ9BY79 579 aa10.39□□□□□ -0.75
TRAPPC13-210ENST00000509234 COLQQ9Y215 455 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC13-210ENST00000509234 TIE1P35590 1138 aa10.36□□□□□ -0.75
TRAPPC13-210ENST00000509234 FBXO22Q8NEZ5 403 aa10.35□□□□□ -0.75
TRAPPC13-210ENST00000509234 ST18O60284 1047 aa10.34□□□□□ -0.75
TRAPPC13-210ENST00000509234 SLAIN1Q8ND83 568 aa10.33□□□□□ -0.76
TRAPPC13-210ENST00000509234 MMRN1Q13201 1228 aa10.32□□□□□ -0.76
TRAPPC13-210ENST00000509234 EFCAB3Q8N7B9 438 aa10.32□□□□□ -0.76
TRAPPC13-210ENST00000509234 SOX12O15370 315 aa10.31□□□□□ -0.76
TRAPPC13-210ENST00000509234 CABP2Q9NPB3 220 aa10.31□□□□□ -0.76
TRAPPC13-210ENST00000509234 TTLL13PA6NNM8 815 aa10.3□□□□□ -0.76
TRAPPC13-210ENST00000509234 SPNS2Q8IVW8 549 aa10.28□□□□□ -0.76
TRAPPC13-210ENST00000509234 ILDR1Q86SU0 546 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC13-210ENST00000509234 BCANQ96GW7 911 aa10.27□□□□□ -0.77
TRAPPC13-210ENST00000509234 PHF8Q9UPP1 1060 aa10.27□□□□□ -0.77
TRAPPC13-210ENST00000509234 TMEM106CQ9BVX2 250 aa10.26□□□□□ -0.77
TRAPPC13-210ENST00000509234 PPP1R37O75864 691 aa10.25□□□□□ -0.77
TRAPPC13-210ENST00000509234 NLRP6P59044 892 aa10.25□□□□□ -0.77
TRAPPC13-210ENST00000509234 CADPS2Q86UW7 1296 aa10.25□□□□□ -0.77
TRAPPC13-210ENST00000509234 MS4A4AQ96JQ5 239 aa10.25□□□□□ -0.77
TRAPPC13-210ENST00000509234 TRIM35Q9UPQ4 493 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms