RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 PELP1Q8IZL8 1130 aaKnown RBP11.34□□□□□ -0.59
SMARCA5-202ENST00000508573 RASEFQ8IZ41 740 aa11.33□□□□□ -0.6
SMARCA5-202ENST00000508573 KIF12Q96FN5 646 aa11.31□□□□□ -0.6
SMARCA5-202ENST00000508573 ATMINO43313 823 aaPredicted RBP11.28□□□□□ -0.6
SMARCA5-202ENST00000508573 ZBTB47Q9UFB7 747 aaPredicted RBP11.28□□□□□ -0.6
SMARCA5-202ENST00000508573 ASTLQ6HA08 431 aaPredicted RBP11.27□□□□□ -0.61
SMARCA5-202ENST00000508573 POTEB2H3BUK9 544 aa11.26□□□□□ -0.61
SMARCA5-202ENST00000508573 MAP3K13O43283 966 aa11.26□□□□□ -0.61
SMARCA5-202ENST00000508573 NUBP1P53384 320 aa11.22□□□□□ -0.61
SMARCA5-202ENST00000508573 C7P10643 843 aa11.21□□□□□ -0.61
SMARCA5-202ENST00000508573 ATN1P54259 1190 aaPredicted RBP11.21□□□□□ -0.61
SMARCA5-202ENST00000508573 SLC39A7Q92504 469 aa11.21□□□□□ -0.61
SMARCA5-202ENST00000508573 OTUD5Q96G74 571 aa11.21□□□□□ -0.61
SMARCA5-202ENST00000508573 METRNQ9UJH8 293 aa11.21□□□□□ -0.61
SMARCA5-202ENST00000508573 TRPC6Q9Y210 931 aa11.21□□□□□ -0.61
SMARCA5-202ENST00000508573 FBXO3Q9UK99 471 aa11.19□□□□□ -0.62
SMARCA5-202ENST00000508573 BMP2KQ9NSY1 1161 aaPredicted RBP11.17□□□□□ -0.62
SMARCA5-202ENST00000508573 PCDHB13Q9Y5F0 798 aa11.15□□□□□ -0.62
SMARCA5-202ENST00000508573 FAM212AQ96EL1 285 aa11.14□□□□□ -0.63
SMARCA5-202ENST00000508573 TIE1P35590 1138 aa11.13□□□□□ -0.63
SMARCA5-202ENST00000508573 DCAF8Q5TAQ9 597 aa11.13□□□□□ -0.63
SMARCA5-202ENST00000508573 SGIP1Q9BQI5 828 aa11.11□□□□□ -0.63
SMARCA5-202ENST00000508573 TTLL13PA6NNM8 815 aa11.09□□□□□ -0.63
SMARCA5-202ENST00000508573 POTEJP0CG39 1038 aa11.09□□□□□ -0.63
SMARCA5-202ENST00000508573 KLHL34Q8N239 644 aa11.09□□□□□ -0.63
SMARCA5-202ENST00000508573 IFNL1Q8IU54 200 aa11.07□□□□□ -0.64
SMARCA5-202ENST00000508573 SEC24BO95487 1268 aa11.05□□□□□ -0.64
SMARCA5-202ENST00000508573 MAMSTRQ6ZN01 415 aa11.05□□□□□ -0.64
SMARCA5-202ENST00000508573 POTEFA5A3E0 1075 aa11.04□□□□□ -0.64
SMARCA5-202ENST00000508573 PYGBP11216 843 aa11.04□□□□□ -0.64
SMARCA5-202ENST00000508573 VASPP50552 380 aaPredicted RBP11.04□□□□□ -0.64
SMARCA5-202ENST00000508573 TRIM35Q9UPQ4 493 aa11.03□□□□□ -0.64
SMARCA5-202ENST00000508573 TMEM106CQ9BVX2 250 aa11.01□□□□□ -0.65
SMARCA5-202ENST00000508573 COLQQ9Y215 455 aaPredicted RBP11.01□□□□□ -0.65
SMARCA5-202ENST00000508573 SCUBE2Q9NQ36 999 aa11□□□□□ -0.65
SMARCA5-202ENST00000508573 PCDHB8Q9UN66 801 aa10.96□□□□□ -0.65
SMARCA5-202ENST00000508573 IER5LQ5T953 404 aa10.95□□□□□ -0.66
SMARCA5-202ENST00000508573 GSE1Q14687 1217 aa10.94□□□□□ -0.66
SMARCA5-202ENST00000508573 FAM163AQ96GL9 167 aaPredicted RBP10.92□□□□□ -0.66
SMARCA5-202ENST00000508573 POTEMA6NI47 508 aa10.9□□□□□ -0.66
SMARCA5-202ENST00000508573 PLCG2P16885 1265 aa10.88□□□□□ -0.67
SMARCA5-202ENST00000508573 POTEGQ6S5H5 508 aa10.88□□□□□ -0.67
SMARCA5-202ENST00000508573 PLSCR2Q9NRY7 297 aa10.88□□□□□ -0.67
SMARCA5-202ENST00000508573 IFNLR1Q8IU57 520 aaPredicted RBP10.86□□□□□ -0.67
SMARCA5-202ENST00000508573 SPOCK2Q92563 424 aa10.84□□□□□ -0.67
SMARCA5-202ENST00000508573 CIZ1Q9ULV3 898 aaPredicted RBP10.84□□□□□ -0.67
SMARCA5-202ENST00000508573 CHRM1P11229 460 aaPredicted RBP10.83□□□□□ -0.68
SMARCA5-202ENST00000508573 IRX5P78411 483 aaPredicted RBP10.83□□□□□ -0.68
SMARCA5-202ENST00000508573 ZNF467Q7Z7K2 595 aaPredicted RBP10.83□□□□□ -0.68
SMARCA5-202ENST00000508573 OCEL1Q9H607 264 aa10.82□□□□□ -0.68
SMARCA5-202ENST00000508573 SLAIN1Q8ND83 568 aa10.8□□□□□ -0.68
SMARCA5-202ENST00000508573 GOLGA2Q08379 1002 aa10.78□□□□□ -0.68
SMARCA5-202ENST00000508573 PSEN1P49768 467 aa10.77□□□□□ -0.69
SMARCA5-202ENST00000508573 LCE2DQ5TA82 110 aaPredicted RBP10.77□□□□□ -0.69
SMARCA5-202ENST00000508573 MKRN3Q13064 507 aaKnown RBP10.76□□□□□ -0.69
SMARCA5-202ENST00000508573 PCDH10Q9P2E7 1040 aa10.71□□□□□ -0.69
SMARCA5-202ENST00000508573 PDAP1Q13442 181 aaKnown RBP10.7□□□□□ -0.7
SMARCA5-202ENST00000508573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.7□□□□□ -0.73e-11■■■■■ 35.6
SMARCA5-202ENST00000508573 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.7□□□□□ -0.7
SMARCA5-202ENST00000508573 PDCD7Q8N8D1 485 aaKnown RBP10.66□□□□□ -0.7
SMARCA5-202ENST00000508573 ST18O60284 1047 aa10.65□□□□□ -0.7
SMARCA5-202ENST00000508573 L3MBTL3Q96JM7 780 aaPredicted RBP10.65□□□□□ -0.7
SMARCA5-202ENST00000508573 CABP2Q9NPB3 220 aa10.65□□□□□ -0.7
SMARCA5-202ENST00000508573 C3orf67Q6ZVT6 689 aa10.61□□□□□ -0.71
SMARCA5-202ENST00000508573 DPY19L2Q6NUT2 758 aa10.6□□□□□ -0.71
SMARCA5-202ENST00000508573 SNPHO15079 494 aa10.59□□□□□ -0.71
SMARCA5-202ENST00000508573 TRIM41Q8WV44 630 aa10.59□□□□□ -0.71
SMARCA5-202ENST00000508573 CDAN1Q8IWY9 1227 aa10.58□□□□□ -0.72
SMARCA5-202ENST00000508573 G3V3G9 751 aa10.54□□□□□ -0.72
SMARCA5-202ENST00000508573 ILDR1Q86SU0 546 aaPredicted RBP10.54□□□□□ -0.72
SMARCA5-202ENST00000508573 EFCAB3Q8N7B9 438 aa10.52□□□□□ -0.73
SMARCA5-202ENST00000508573 BOLA1Q9Y3E2 137 aa10.51□□□□□ -0.73
SMARCA5-202ENST00000508573 MARVELD3Q96A59 401 aa10.5□□□□□ -0.73
SMARCA5-202ENST00000508573 TMEM121BQ9BXQ6 578 aaPredicted RBP10.49□□□□□ -0.73
SMARCA5-202ENST00000508573 RIOK3O14730 519 aaKnown RBP10.48□□□□□ -0.73
SMARCA5-202ENST00000508573 RNF25Q96BH1 459 aaPredicted RBP10.45□□□□□ -0.74
SMARCA5-202ENST00000508573 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.44□□□□□ -0.74
SMARCA5-202ENST00000508573 ZFP91Q96JP5 570 aaPredicted RBP10.44□□□□□ -0.74
SMARCA5-202ENST00000508573 VGFO15240 615 aaPredicted RBP10.42□□□□□ -0.74
SMARCA5-202ENST00000508573 SOX12O15370 315 aa10.4□□□□□ -0.74
SMARCA5-202ENST00000508573 EMP3P54852 163 aa10.4□□□□□ -0.74
SMARCA5-202ENST00000508573 PHF8Q9UPP1 1060 aa10.37□□□□□ -0.75
SMARCA5-202ENST00000508573 FAM205CA6NFA0 338 aa10.36□□□□□ -0.75
SMARCA5-202ENST00000508573 HOXB3P14651 431 aaPredicted RBP10.34□□□□□ -0.75
SMARCA5-202ENST00000508573 ZNF710Q8N1W2 664 aa10.34□□□□□ -0.75
SMARCA5-202ENST00000508573 TAOK2Q9UL54 1235 aa10.34□□□□□ -0.75
SMARCA5-202ENST00000508573 ECM2O94769 699 aaPredicted RBP10.33□□□□□ -0.76
SMARCA5-202ENST00000508573 MICALL2Q8IY33 904 aa10.33□□□□□ -0.76
SMARCA5-202ENST00000508573 MS4A4AQ96JQ5 239 aa10.33□□□□□ -0.76
SMARCA5-202ENST00000508573 POTEB3A0JP26 581 aa10.32□□□□□ -0.76
SMARCA5-202ENST00000508573 POTEBQ6S5H4 581 aa10.32□□□□□ -0.76
SMARCA5-202ENST00000508573 HS3ST6Q96QI5 342 aa10.32□□□□□ -0.76
SMARCA5-202ENST00000508573 BCL11BQ9C0K0 894 aaPredicted RBP10.32□□□□□ -0.76
SMARCA5-202ENST00000508573 STK24Q9Y6E0 443 aa10.32□□□□□ -0.76
SMARCA5-202ENST00000508573 DOK7Q18PE1 504 aa10.3□□□□□ -0.76
SMARCA5-202ENST00000508573 SPNS2Q8IVW8 549 aa10.3□□□□□ -0.76
SMARCA5-202ENST00000508573 NLRP6P59044 892 aa10.29□□□□□ -0.76
SMARCA5-202ENST00000508573 TMEM92Q6UXU6 159 aa10.29□□□□□ -0.76
SMARCA5-202ENST00000508573 HOXB1P14653 301 aaPredicted RBP10.27□□□□□ -0.77
SMARCA5-202ENST00000508573 STK25O00506 426 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 209.8 ms