RNA–Protein interactions for RNA: ENST00000504842.5

PROM1-205, Transcript of prominin 1, humanhuman

TSL 5

Gene PROM1, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-205ENST00000504842 LHX8Q68G74 356 aa11.49□□□□□ -0.57
PROM1-205ENST00000504842 ZNF579Q8NAF0 562 aaKnown RBP11.48□□□□□ -0.57
PROM1-205ENST00000504842 PLCD3Q8N3E9 789 aa11.45□□□□□ -0.58
PROM1-205ENST00000504842 ECM2O94769 699 aaPredicted RBP11.44□□□□□ -0.58
PROM1-205ENST00000504842 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.42□□□□□ -0.58
PROM1-205ENST00000504842 PLEKHG5O94827 1062 aa11.4□□□□□ -0.58
PROM1-205ENST00000504842 POTEIP0CG38 1075 aa11.4□□□□□ -0.58
PROM1-205ENST00000504842 VSIG10Q8N0Z9 540 aa11.39□□□□□ -0.59
PROM1-205ENST00000504842 MIER1Q8N108 512 aa11.39□□□□□ -0.59
PROM1-205ENST00000504842 PHF12Q96QT6 1004 aa11.39□□□□□ -0.59
PROM1-205ENST00000504842 GALR2O43603 387 aaPredicted RBP11.38□□□□□ -0.59
PROM1-205ENST00000504842 BBXQ8WY36 941 aaPredicted RBP11.38□□□□□ -0.59
PROM1-205ENST00000504842 BCANQ96GW7 911 aa11.36□□□□□ -0.59
PROM1-205ENST00000504842 MNX1P50219 401 aaPredicted RBP11.33□□□□□ -0.6
PROM1-205ENST00000504842 TSPYL2Q9H2G4 693 aaPredicted RBP11.32□□□□□ -0.6
PROM1-205ENST00000504842 ZBTB47Q9UFB7 747 aaPredicted RBP11.31□□□□□ -0.6
PROM1-205ENST00000504842 PAXIP1Q6ZW49 1069 aaPredicted RBP11.28□□□□□ -0.6
PROM1-205ENST00000504842 CFAP44Q96MT7 982 aa11.27□□□□□ -0.61
PROM1-205ENST00000504842 RGL2O15211 777 aa11.25□□□□□ -0.61
PROM1-205ENST00000504842 CIZ1Q9ULV3 898 aaPredicted RBP11.25□□□□□ -0.61
PROM1-205ENST00000504842 MS4A3Q96HJ5 214 aa11.22□□□□□ -0.61
PROM1-205ENST00000504842 SPRYD3Q8NCJ5 442 aa11.2□□□□□ -0.62
PROM1-205ENST00000504842 TRIM41Q8WV44 630 aa11.19□□□□□ -0.62
PROM1-205ENST00000504842 CHGAP10645 457 aaKnown RBP11.15□□□□□ -0.62
PROM1-205ENST00000504842 KDM2AQ9Y2K7 1162 aa11.14□□□□□ -0.63
PROM1-205ENST00000504842 CCDC61Q9Y6R9 512 aa11.14□□□□□ -0.63
PROM1-205ENST00000504842 TAOK2Q9UL54 1235 aa11.13□□□□□ -0.63
PROM1-205ENST00000504842 RASEFQ8IZ41 740 aa11.11□□□□□ -0.63
PROM1-205ENST00000504842 PELP1Q8IZL8 1130 aaKnown RBP11.11□□□□□ -0.63
PROM1-205ENST00000504842 METRNQ9UJH8 293 aa11.11□□□□□ -0.63
PROM1-205ENST00000504842 ATMINO43313 823 aaPredicted RBP11.1□□□□□ -0.63
PROM1-205ENST00000504842 SLC39A7Q92504 469 aa11.1□□□□□ -0.63
PROM1-205ENST00000504842 GSE1Q14687 1217 aa11.09□□□□□ -0.63
PROM1-205ENST00000504842 ASTLQ6HA08 431 aaPredicted RBP11.09□□□□□ -0.63
PROM1-205ENST00000504842 KIF12Q96FN5 646 aa11.09□□□□□ -0.63
PROM1-205ENST00000504842 MAP3K13O43283 966 aa11.06□□□□□ -0.64
PROM1-205ENST00000504842 C7P10643 843 aa11.06□□□□□ -0.64
PROM1-205ENST00000504842 TSHZ2Q9NRE2 1034 aa11.06□□□□□ -0.64
PROM1-205ENST00000504842 PRKCSHP14314 528 aaPredicted RBP11.05□□□□□ -0.64
PROM1-205ENST00000504842 POTEB2H3BUK9 544 aa11.04□□□□□ -0.64
PROM1-205ENST00000504842 ATN1P54259 1190 aaPredicted RBP11.03□□□□□ -0.64
PROM1-205ENST00000504842 HS6ST3Q8IZP7 471 aa11.03□□□□□ -0.64
PROM1-205ENST00000504842 OTUD5Q96G74 571 aa11.03□□□□□ -0.64
PROM1-205ENST00000504842 FAM212AQ96EL1 285 aa11.02□□□□□ -0.65
PROM1-205ENST00000504842 PCDHB13Q9Y5F0 798 aa11□□□□□ -0.65
PROM1-205ENST00000504842 DCAF8Q5TAQ9 597 aa10.99□□□□□ -0.65
PROM1-205ENST00000504842 BMP2KQ9NSY1 1161 aaPredicted RBP10.99□□□□□ -0.65
PROM1-205ENST00000504842 TPRNQ4KMQ1 711 aa10.98□□□□□ -0.65
PROM1-205ENST00000504842 TIE1P35590 1138 aa10.97□□□□□ -0.65
PROM1-205ENST00000504842 MAMSTRQ6ZN01 415 aa10.97□□□□□ -0.65
PROM1-205ENST00000504842 TRPC6Q9Y210 931 aa10.97□□□□□ -0.65
PROM1-205ENST00000504842 SEC24BO95487 1268 aa10.96□□□□□ -0.65
PROM1-205ENST00000504842 NUBP1P53384 320 aa10.96□□□□□ -0.65
PROM1-205ENST00000504842 RIOK3O14730 519 aaKnown RBP10.94□□□□□ -0.66
PROM1-205ENST00000504842 DNAJC5Q9H3Z4 198 aa10.94□□□□□ -0.66
PROM1-205ENST00000504842 SCUBE2Q9NQ36 999 aa10.94□□□□□ -0.66
PROM1-205ENST00000504842 RNF25Q96BH1 459 aaPredicted RBP10.93□□□□□ -0.66
PROM1-205ENST00000504842 TTLL13PA6NNM8 815 aa10.91□□□□□ -0.66
PROM1-205ENST00000504842 NBR1Q14596 966 aa10.91□□□□□ -0.66
PROM1-205ENST00000504842 SGIP1Q9BQI5 828 aa10.91□□□□□ -0.66
PROM1-205ENST00000504842 PLSCR2Q9NRY7 297 aa10.89□□□□□ -0.67
PROM1-205ENST00000504842 TRIM35Q9UPQ4 493 aa10.88□□□□□ -0.67
PROM1-205ENST00000504842 VGFO15240 615 aaPredicted RBP10.87□□□□□ -0.67
PROM1-205ENST00000504842 IFNL1Q8IU54 200 aa10.87□□□□□ -0.67
PROM1-205ENST00000504842 TMEM106CQ9BVX2 250 aa10.86□□□□□ -0.67
PROM1-205ENST00000504842 STK25O00506 426 aa10.85□□□□□ -0.67
PROM1-205ENST00000504842 POTEJP0CG39 1038 aa10.85□□□□□ -0.67
PROM1-205ENST00000504842 PYGBP11216 843 aa10.85□□□□□ -0.67
PROM1-205ENST00000504842 POTEMA6NI47 508 aa10.83□□□□□ -0.68
PROM1-205ENST00000504842 CHRM1P11229 460 aaPredicted RBP10.83□□□□□ -0.68
PROM1-205ENST00000504842 NKX1-1Q15270 411 aaPredicted RBP10.81□□□□□ -0.68
PROM1-205ENST00000504842 IER5LQ5T953 404 aa10.81□□□□□ -0.68
PROM1-205ENST00000504842 COLQQ9Y215 455 aaPredicted RBP10.81□□□□□ -0.68
PROM1-205ENST00000504842 POTEFA5A3E0 1075 aa10.8□□□□□ -0.68
PROM1-205ENST00000504842 GTPBP6O43824 516 aaPredicted RBP10.8□□□□□ -0.68
PROM1-205ENST00000504842 POTEGQ6S5H5 508 aa10.8□□□□□ -0.68
PROM1-205ENST00000504842 FAM163AQ96GL9 167 aaPredicted RBP10.8□□□□□ -0.68
PROM1-205ENST00000504842 RYDENQ9NUL5 291 aaKnown RBP10.8□□□□□ -0.68
PROM1-205ENST00000504842 PLCG2P16885 1265 aa10.79□□□□□ -0.68
PROM1-205ENST00000504842 STK24Q9Y6E0 443 aa10.76□□□□□ -0.69
PROM1-205ENST00000504842 PCDHB8Q9UN66 801 aa10.75□□□□□ -0.69
PROM1-205ENST00000504842 BCL11BQ9C0K0 894 aaPredicted RBP10.74□□□□□ -0.69
PROM1-205ENST00000504842 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.73□□□□□ -0.69
PROM1-205ENST00000504842 ZFP91Q96JP5 570 aaPredicted RBP10.73□□□□□ -0.69
PROM1-205ENST00000504842 GOLGA2Q08379 1002 aa10.72□□□□□ -0.69
PROM1-205ENST00000504842 ZNF467Q7Z7K2 595 aaPredicted RBP10.69□□□□□ -0.7
PROM1-205ENST00000504842 SLAIN1Q8ND83 568 aa10.69□□□□□ -0.7
PROM1-205ENST00000504842 OCEL1Q9H607 264 aa10.65□□□□□ -0.7
PROM1-205ENST00000504842 IRX5P78411 483 aaPredicted RBP10.63□□□□□ -0.71
PROM1-205ENST00000504842 MKRN3Q13064 507 aaKnown RBP10.63□□□□□ -0.71
PROM1-205ENST00000504842 PCDH10Q9P2E7 1040 aa10.62□□□□□ -0.71
PROM1-205ENST00000504842 P3H3Q8IVL6 736 aa10.61□□□□□ -0.71
PROM1-205ENST00000504842 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.59□□□□□ -0.71
PROM1-205ENST00000504842 PSEN1P49768 467 aa10.58□□□□□ -0.72
PROM1-205ENST00000504842 LCE2DQ5TA82 110 aaPredicted RBP10.58□□□□□ -0.72
PROM1-205ENST00000504842 WDR70Q9NW82 654 aa10.58□□□□□ -0.72
PROM1-205ENST00000504842 PDAP1Q13442 181 aaKnown RBP10.55□□□□□ -0.72
PROM1-205ENST00000504842 C3orf67Q6ZVT6 689 aa10.55□□□□□ -0.72
PROM1-205ENST00000504842 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.54□□□□□ -0.72
PROM1-205ENST00000504842 G3V3G9 751 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms