RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 WWC1Q8IX03 1113 aa8.55□□□□□ -1.04
CLCN3-204ENST00000504131 PSMD1Q99460 953 aa8.55□□□□□ -1.04
CLCN3-204ENST00000504131 DCAF1Q9Y4B6 1507 aa8.55□□□□□ -1.04
CLCN3-204ENST00000504131 PTMAP06454 111 aaKnown RBP8.54□□□□□ -1.04
CLCN3-204ENST00000504131 RSPH6AQ9H0K4 717 aa8.54□□□□□ -1.04
CLCN3-204ENST00000504131 ZMYND15Q9H091 742 aa8.54□□□□□ -1.04
CLCN3-204ENST00000504131 SHROOM4Q9ULL8 1493 aa8.53□□□□□ -1.04
CLCN3-204ENST00000504131 HSP90AA1P07900 732 aaKnown RBP8.53□□□□□ -1.04
CLCN3-204ENST00000504131 MYO15BQ96JP2 1530 aa8.53□□□□□ -1.04
CLCN3-204ENST00000504131 HSP90AA2PQ14568 343 aaPredicted RBP8.53□□□□□ -1.04
CLCN3-204ENST00000504131 ZBTB7CA1YPR0 619 aa8.53□□□□□ -1.04
CLCN3-204ENST00000504131 ANP32BQ92688 251 aaKnown RBP8.51□□□□□ -1.05
CLCN3-204ENST00000504131 BCCIPQ9P287 314 aaKnown RBP eCLIP8.51□□□□□ -1.05
CLCN3-204ENST00000504131 PPM1GO15355 546 aaPredicted RBP8.51□□□□□ -1.05
CLCN3-204ENST00000504131 TRIM44Q96DX7 344 aaPredicted RBP8.51□□□□□ -1.05
CLCN3-204ENST00000504131 TMEM132AQ24JP5 1023 aa8.5□□□□□ -1.05
CLCN3-204ENST00000504131 PLCB2Q00722 1185 aa8.5□□□□□ -1.05
CLCN3-204ENST00000504131 OS9Q13438 667 aaPredicted RBP8.5□□□□□ -1.05
CLCN3-204ENST00000504131 SLC4A1APQ9BWU0 796 aaKnown RBP8.49□□□□□ -1.05
CLCN3-204ENST00000504131 NAP1L2Q9ULW6 460 aaPredicted RBP8.49□□□□□ -1.05
CLCN3-204ENST00000504131 LAS1LQ9Y4W2 734 aaKnown RBP8.48□□□□□ -1.05
CLCN3-204ENST00000504131 UBTFP17480 764 aaKnown RBP8.48□□□□□ -1.05
CLCN3-204ENST00000504131 BBXQ8WY36 941 aaPredicted RBP8.48□□□□□ -1.05
CLCN3-204ENST00000504131 PLCD4Q9BRC7 762 aa8.47□□□□□ -1.05
CLCN3-204ENST00000504131 DIEXFQ68CQ4 756 aaKnown RBP8.46□□□□□ -1.05
CLCN3-204ENST00000504131 CLSTN1O94985 981 aa8.45□□□□□ -1.06
CLCN3-204ENST00000504131 PRDM10Q9NQV6 1147 aa8.44□□□□□ -1.06
CLCN3-204ENST00000504131 SAMD1Q6SPF0 538 aaPredicted RBP8.43□□□□□ -1.06
CLCN3-204ENST00000504131 ABCC9O60706 1549 aa8.43□□□□□ -1.06
CLCN3-204ENST00000504131 LOC105371045A0A1W2PR82 267 aa8.43□□□□□ -1.06
CLCN3-204ENST00000504131 DNTTIP2Q5QJE6 756 aaKnown RBP8.42□□□□□ -1.06
CLCN3-204ENST00000504131 ZNF592Q92610 1267 aa8.42□□□□□ -1.06
CLCN3-204ENST00000504131 CALRP27797 417 aaKnown RBP8.41□□□□□ -1.06
CLCN3-204ENST00000504131 AAMPQ13685 434 aa8.4□□□□□ -1.06
CLCN3-204ENST00000504131 CNPY4Q8N129 248 aa8.4□□□□□ -1.06
CLCN3-204ENST00000504131 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.4□□□□□ -1.06
CLCN3-204ENST00000504131 CHMP4BQ9H444 224 aaKnown RBP8.4□□□□□ -1.07
CLCN3-204ENST00000504131 NEFMP07197 916 aa8.39□□□□□ -1.07
CLCN3-204ENST00000504131 CNKSR2Q8WXI2 1034 aa8.39□□□□□ -1.07
CLCN3-204ENST00000504131 ANP32AP39687 249 aaKnown RBP8.38□□□□□ -1.07
CLCN3-204ENST00000504131 ZCCHC6Q5VYS8 1495 aaKnown RBP8.37□□□□□ -1.07
CLCN3-204ENST00000504131 RBM25P49756 843 aaKnown RBP8.35□□□□□ -1.07
CLCN3-204ENST00000504131 FAM193AP78312 1265 aa8.35□□□□□ -1.07
CLCN3-204ENST00000504131 TNNT3P45378 269 aaPredicted RBP8.32□□□□□ -1.08
CLCN3-204ENST00000504131 MAPK8IP2Q13387 824 aaPredicted RBP8.32□□□□□ -1.08
CLCN3-204ENST00000504131 FAM9BQ8IZU0 186 aa8.31□□□□□ -1.08
CLCN3-204ENST00000504131 FKBP8Q14318 412 aa8.3□□□□□ -1.08
CLCN3-204ENST00000504131 FTSJ3Q8IY81 847 aaKnown RBP8.3□□□□□ -1.08
CLCN3-204ENST00000504131 PLCD3Q8N3E9 789 aa8.3□□□□□ -1.08
CLCN3-204ENST00000504131 TICAM2Q86XR7 235 aa8.29□□□□□ -1.08
CLCN3-204ENST00000504131 IRX3P78415 501 aaPredicted RBP8.28□□□□□ -1.08
CLCN3-204ENST00000504131 ZFP91Q96JP5 570 aaPredicted RBP8.28□□□□□ -1.08
CLCN3-204ENST00000504131 IPO4Q8TEX9 1081 aaKnown RBP8.28□□□□□ -1.08
CLCN3-204ENST00000504131 ZBTB47Q9UFB7 747 aaPredicted RBP8.28□□□□□ -1.08
CLCN3-204ENST00000504131 CC2D1BQ5T0F9 858 aaKnown RBP8.27□□□□□ -1.09
CLCN3-204ENST00000504131 TSHZ2Q9NRE2 1034 aa8.26□□□□□ -1.09
CLCN3-204ENST00000504131 FAM50AQ14320 339 aaKnown RBP8.26□□□□□ -1.09
CLCN3-204ENST00000504131 CLGNO14967 610 aa8.25□□□□□ -1.09
CLCN3-204ENST00000504131 RRP9O43818 475 aaKnown RBP8.25□□□□□ -1.09
CLCN3-204ENST00000504131 AEBP1Q8IUX7 1158 aa8.25□□□□□ -1.09
CLCN3-204ENST00000504131 RSPH4AQ5TD94 716 aa8.24□□□□□ -1.09
CLCN3-204ENST00000504131 GPATCH11Q8N954 259 aa8.23□□□□□ -1.09
CLCN3-204ENST00000504131 IL27Q8NEV9 243 aa8.23□□□□□ -1.09
CLCN3-204ENST00000504131 RAD21O60216 631 aa8.22□□□□□ -1.09
CLCN3-204ENST00000504131 PNNQ9H307 717 aaKnown RBP8.22□□□□□ -1.09
CLCN3-204ENST00000504131 BRPF3Q9ULD4 1205 aa8.21□□□□□ -1.09
CLCN3-204ENST00000504131 CWC22Q9HCG8 908 aaKnown RBP8.2□□□□□ -1.1
CLCN3-204ENST00000504131 NOP58Q9Y2X3 529 aaKnown RBP8.2□□□□□ -1.1
CLCN3-204ENST00000504131 IGSF3O75054 1194 aa8.2□□□□□ -1.1
CLCN3-204ENST00000504131 RBM19Q9Y4C8 960 aaKnown RBP8.2□□□□□ -1.1
CLCN3-204ENST00000504131 AXDND1Q5T1B0 1012 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-204ENST00000504131 ATP1B4Q9UN42 357 aaPredicted RBP8.18□□□□□ -1.1
CLCN3-204ENST00000504131 TMX4Q9H1E5 349 aaPredicted RBP8.18□□□□□ -1.1
CLCN3-204ENST00000504131 ANAPC15P60006 121 aa8.17□□□□□ -1.1
CLCN3-204ENST00000504131 LMOD2Q6P5Q4 547 aa8.17□□□□□ -1.1
CLCN3-204ENST00000504131 TEX2Q8IWB9 1127 aa8.17□□□□□ -1.1
CLCN3-204ENST00000504131 SECISBP2LQ93073 1101 aaKnown RBP8.16□□□□□ -1.1
CLCN3-204ENST00000504131 E9PSI1 815 aa8.16□□□□□ -1.1
CLCN3-204ENST00000504131 PPP1R1BQ9UD71 204 aaPredicted RBP8.15□□□□□ -1.1
CLCN3-204ENST00000504131 TAF3Q5VWG9 929 aa8.15□□□□□ -1.1
CLCN3-204ENST00000504131 HDAC5Q9UQL6 1122 aa8.14□□□□□ -1.11
CLCN3-204ENST00000504131 ZNF622Q969S3 477 aaKnown RBP eCLIP8.14□□□□□ -1.11
CLCN3-204ENST00000504131 KCTD17Q8N5Z5 321 aa8.13□□□□□ -1.11
CLCN3-204ENST00000504131 ANP32CO43423 234 aa8.13□□□□□ -1.11
CLCN3-204ENST00000504131 PABPN1Q86U42 306 aaKnown RBP eCLIP8.13□□□□□ -1.11
CLCN3-204ENST00000504131 SUPT16HQ9Y5B9 1047 aaKnown RBP8.13□□□□□ -1.11
CLCN3-204ENST00000504131 SSR1P43307 286 aaKnown RBP8.13□□□□□ -1.11
CLCN3-204ENST00000504131 UNC13AQ9UPW8 1703 aa8.12□□□□□ -1.11
CLCN3-204ENST00000504131 MCCP23508 829 aa8.12□□□□□ -1.11
CLCN3-204ENST00000504131 SETQ01105 290 aaPredicted RBP8.12□□□□□ -1.11
CLCN3-204ENST00000504131 ARID4AP29374 1257 aaPredicted RBP8.11□□□□□ -1.11
CLCN3-204ENST00000504131 SOX12O15370 315 aa8.11□□□□□ -1.11
CLCN3-204ENST00000504131 FBLN2P98095 1184 aa8.11□□□□□ -1.11
CLCN3-204ENST00000504131 NACADO15069 1562 aa8.11□□□□□ -1.11
CLCN3-204ENST00000504131 MEX3CQ5U5Q3 659 aaKnown RBP8.11□□□□□ -1.11
CLCN3-204ENST00000504131 STK11IPQ8N1F8 1099 aa8.09□□□□□ -1.11
CLCN3-204ENST00000504131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.09□□□□□ -1.11
CLCN3-204ENST00000504131 NOL8Q76FK4 1167 aaKnown RBP8.09□□□□□ -1.11
CLCN3-204ENST00000504131 CERS3Q8IU89 383 aa8.09□□□□□ -1.11
CLCN3-204ENST00000504131 RGS3P49796 1198 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms