RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 ZNF579Q8NAF0 562 aaKnown RBP12.61□□□□□ -0.39
PDCD4-211ENST00000498367 POTEIP0CG38 1075 aa12.59□□□□□ -0.39
PDCD4-211ENST00000498367 MNX1P50219 401 aaPredicted RBP12.59□□□□□ -0.39
PDCD4-211ENST00000498367 ZRANB1Q9UGI0 708 aa12.55□□□□□ -0.4
PDCD4-211ENST00000498367 PLCB2Q00722 1185 aa12.52□□□□□ -0.41
PDCD4-211ENST00000498367 TPRNQ4KMQ1 711 aa12.52□□□□□ -0.41
PDCD4-211ENST00000498367 NPM1P06748 294 aaKnown RBP eCLIP12.46□□□□□ -0.41
PDCD4-211ENST00000498367 GALR2O43603 387 aaPredicted RBP12.43□□□□□ -0.42
PDCD4-211ENST00000498367 PAK3O75914 559 aaPredicted RBP12.41□□□□□ -0.42
PDCD4-211ENST00000498367 PHF12Q96QT6 1004 aa12.41□□□□□ -0.42
PDCD4-211ENST00000498367 GTF3C3Q9Y5Q9 886 aa12.41□□□□□ -0.42
PDCD4-211ENST00000498367 DCBLD2Q96PD2 775 aa12.4□□□□□ -0.42
PDCD4-211ENST00000498367 HAP1P54257 671 aaPredicted RBP12.37□□□□□ -0.43
PDCD4-211ENST00000498367 PLSCR2Q9NRY7 297 aa12.3□□□□□ -0.44
PDCD4-211ENST00000498367 PODXL2Q9NZ53 605 aa12.3□□□□□ -0.44
PDCD4-211ENST00000498367 VSIG10Q8N0Z9 540 aa12.28□□□□□ -0.44
PDCD4-211ENST00000498367 CCDC61Q9Y6R9 512 aa12.26□□□□□ -0.45
PDCD4-211ENST00000498367 MS4A3Q96HJ5 214 aa12.25□□□□□ -0.45
PDCD4-211ENST00000498367 TSPYL2Q9H2G4 693 aaPredicted RBP12.22□□□□□ -0.45
PDCD4-211ENST00000498367 ASTLQ6HA08 431 aaPredicted RBP12.2□□□□□ -0.46
PDCD4-211ENST00000498367 MIER1Q8N108 512 aa12.2□□□□□ -0.46
PDCD4-211ENST00000498367 POTEB2H3BUK9 544 aa12.17□□□□□ -0.46
PDCD4-211ENST00000498367 PLEKHG5O94827 1062 aa12.17□□□□□ -0.46
PDCD4-211ENST00000498367 RASEFQ8IZ41 740 aa12.17□□□□□ -0.46
PDCD4-211ENST00000498367 KIF12Q96FN5 646 aa12.17□□□□□ -0.46
PDCD4-211ENST00000498367 FBXO3Q9UK99 471 aa12.17□□□□□ -0.46
PDCD4-211ENST00000498367 ATMINO43313 823 aaPredicted RBP12.16□□□□□ -0.46
PDCD4-211ENST00000498367 FKBP8Q14318 412 aa12.16□□□□□ -0.46
PDCD4-211ENST00000498367 EIF5BO60841 1220 aaKnown RBP12.11□□□□□ -0.47
PDCD4-211ENST00000498367 NPM2Q86SE8 214 aaKnown RBP12.11□□□□□ -0.47
PDCD4-211ENST00000498367 OTUD5Q96G74 571 aa12.11□□□□□ -0.47
PDCD4-211ENST00000498367 PLCD3Q8N3E9 789 aa12.1□□□□□ -0.47
PDCD4-211ENST00000498367 TMEM132AQ24JP5 1023 aa12.09□□□□□ -0.47
PDCD4-211ENST00000498367 NUBP1P53384 320 aa12.08□□□□□ -0.48
PDCD4-211ENST00000498367 C14orf37Q86TY3 774 aa12.08□□□□□ -0.48
PDCD4-211ENST00000498367 METRNQ9UJH8 293 aa12.08□□□□□ -0.48
PDCD4-211ENST00000498367 MAP3K13O43283 966 aa12.07□□□□□ -0.48
PDCD4-211ENST00000498367 SLC39A7Q92504 469 aa12.07□□□□□ -0.48
PDCD4-211ENST00000498367 C7P10643 843 aa12.06□□□□□ -0.48
PDCD4-211ENST00000498367 ATN1P54259 1190 aaPredicted RBP12.06□□□□□ -0.48
PDCD4-211ENST00000498367 KLHL34Q8N239 644 aa12.06□□□□□ -0.48
PDCD4-211ENST00000498367 TRPC6Q9Y210 931 aa12.06□□□□□ -0.48
PDCD4-211ENST00000498367 BMP2KQ9NSY1 1161 aaPredicted RBP12.04□□□□□ -0.48
PDCD4-211ENST00000498367 ZBTB47Q9UFB7 747 aaPredicted RBP12.04□□□□□ -0.48
PDCD4-211ENST00000498367 POTEJP0CG39 1038 aa12.02□□□□□ -0.49
PDCD4-211ENST00000498367 DCAF8L2P0C7V8 631 aa12.01□□□□□ -0.49
PDCD4-211ENST00000498367 TIE1P35590 1138 aa12.01□□□□□ -0.49
PDCD4-211ENST00000498367 SGIP1Q9BQI5 828 aa11.99□□□□□ -0.49
PDCD4-211ENST00000498367 POTEMA6NI47 508 aa11.97□□□□□ -0.49
PDCD4-211ENST00000498367 POTEFA5A3E0 1075 aa11.96□□□□□ -0.49
PDCD4-211ENST00000498367 TTLL13PA6NNM8 815 aa11.94□□□□□ -0.5
PDCD4-211ENST00000498367 POTEGQ6S5H5 508 aa11.92□□□□□ -0.5
PDCD4-211ENST00000498367 FAM212AQ96EL1 285 aa11.92□□□□□ -0.5
PDCD4-211ENST00000498367 PCDHB13Q9Y5F0 798 aa11.92□□□□□ -0.5
PDCD4-211ENST00000498367 IFNL1Q8IU54 200 aa11.89□□□□□ -0.51
PDCD4-211ENST00000498367 MAMSTRQ6ZN01 415 aa11.87□□□□□ -0.51
PDCD4-211ENST00000498367 PCDH10Q9P2E7 1040 aa11.85□□□□□ -0.51
PDCD4-211ENST00000498367 COLQQ9Y215 455 aaPredicted RBP11.85□□□□□ -0.51
PDCD4-211ENST00000498367 TRIM35Q9UPQ4 493 aa11.84□□□□□ -0.51
PDCD4-211ENST00000498367 IER5LQ5T953 404 aa11.83□□□□□ -0.52
PDCD4-211ENST00000498367 VASPP50552 380 aaPredicted RBP11.82□□□□□ -0.52
PDCD4-211ENST00000498367 SCUBE2Q9NQ36 999 aa11.79□□□□□ -0.52
PDCD4-211ENST00000498367 DCAF8Q5TAQ9 597 aa11.77□□□□□ -0.53
PDCD4-211ENST00000498367 TMEM106CQ9BVX2 250 aa11.77□□□□□ -0.53
PDCD4-211ENST00000498367 PYGBP11216 843 aa11.76□□□□□ -0.53
PDCD4-211ENST00000498367 SEC24BO95487 1268 aa11.75□□□□□ -0.53
PDCD4-211ENST00000498367 LCE2DQ5TA82 110 aaPredicted RBP11.75□□□□□ -0.53
PDCD4-211ENST00000498367 KDM2AQ9Y2K7 1162 aa11.72□□□□□ -0.53
PDCD4-211ENST00000498367 IRX5P78411 483 aaPredicted RBP11.7□□□□□ -0.54
PDCD4-211ENST00000498367 PCDHB8Q9UN66 801 aa11.7□□□□□ -0.54
PDCD4-211ENST00000498367 FAM163AQ96GL9 167 aaPredicted RBP11.69□□□□□ -0.54
PDCD4-211ENST00000498367 GSE1Q14687 1217 aa11.68□□□□□ -0.54
PDCD4-211ENST00000498367 CHRM1P11229 460 aaPredicted RBP11.66□□□□□ -0.54
PDCD4-211ENST00000498367 TRIM26Q12899 539 aaPredicted RBP11.66□□□□□ -0.54
PDCD4-211ENST00000498367 NBR1Q14596 966 aa11.65□□□□□ -0.54
PDCD4-211ENST00000498367 PLCG2P16885 1265 aa11.63□□□□□ -0.55
PDCD4-211ENST00000498367 IFNLR1Q8IU57 520 aaPredicted RBP11.63□□□□□ -0.55
PDCD4-211ENST00000498367 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.62□□□□□ -0.55
PDCD4-211ENST00000498367 SUPT5HO00267 1087 aaKnown RBP11.61□□□□□ -0.55
PDCD4-211ENST00000498367 HMGB1P09429 215 aaKnown RBP11.61□□□□□ -0.55
PDCD4-211ENST00000498367 ZNF467Q7Z7K2 595 aaPredicted RBP11.61□□□□□ -0.55
PDCD4-211ENST00000498367 OCEL1Q9H607 264 aa11.6□□□□□ -0.55
PDCD4-211ENST00000498367 SPOCK2Q92563 424 aa11.56□□□□□ -0.56
PDCD4-211ENST00000498367 PDCD7Q8N8D1 485 aaKnown RBP11.54□□□□□ -0.56
PDCD4-211ENST00000498367 SLAIN1Q8ND83 568 aa11.54□□□□□ -0.56
PDCD4-211ENST00000498367 CDK11AQ9UQ88 783 aaPredicted RBP11.53□□□□□ -0.56
PDCD4-211ENST00000498367 PSEN1P49768 467 aa11.51□□□□□ -0.57
PDCD4-211ENST00000498367 ILDR1Q86SU0 546 aaPredicted RBP11.49□□□□□ -0.57
PDCD4-211ENST00000498367 UBTFP17480 764 aaKnown RBP11.47□□□□□ -0.57
PDCD4-211ENST00000498367 CCDC9Q9Y3X0 531 aaKnown RBP11.47□□□□□ -0.57
PDCD4-211ENST00000498367 PDAP1Q13442 181 aaKnown RBP11.46□□□□□ -0.57
PDCD4-211ENST00000498367 ST18O60284 1047 aa11.45□□□□□ -0.58
PDCD4-211ENST00000498367 HRCP23327 699 aa11.45□□□□□ -0.58
PDCD4-211ENST00000498367 MKRN3Q13064 507 aaKnown RBP11.45□□□□□ -0.58
PDCD4-211ENST00000498367 SHROOM4Q9ULL8 1493 aa11.44□□□□□ -0.58
PDCD4-211ENST00000498367 CDAN1Q8IWY9 1227 aa11.44□□□□□ -0.58
PDCD4-211ENST00000498367 BBXQ8WY36 941 aaPredicted RBP11.44□□□□□ -0.58
PDCD4-211ENST00000498367 CIZ1Q9ULV3 898 aaPredicted RBP11.44□□□□□ -0.58
PDCD4-211ENST00000498367 CDK11BP21127 795 aaKnown RBP11.43□□□□□ -0.58
PDCD4-211ENST00000498367 GOLGA2Q08379 1002 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms