RNA–Protein interactions for RNA: ENST00000496489.5

NCK1-212, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-212ENST00000496489 PLCD3Q8N3E9 789 aa7.41□□□□□ -1.22
NCK1-212ENST00000496489 PHF12Q96QT6 1004 aa7.41□□□□□ -1.22
NCK1-212ENST00000496489 KLHL34Q8N239 644 aa7.4□□□□□ -1.22
NCK1-212ENST00000496489 TSPYL2Q9H2G4 693 aaPredicted RBP7.39□□□□□ -1.23
NCK1-212ENST00000496489 SPOCK2Q92563 424 aa7.34□□□□□ -1.23
NCK1-212ENST00000496489 CCDC61Q9Y6R9 512 aa7.33□□□□□ -1.24
NCK1-212ENST00000496489 MS4A3Q96HJ5 214 aa7.31□□□□□ -1.24
NCK1-212ENST00000496489 ZBTB47Q9UFB7 747 aaPredicted RBP7.31□□□□□ -1.24
NCK1-212ENST00000496489 RASEFQ8IZ41 740 aa7.29□□□□□ -1.24
NCK1-212ENST00000496489 KIF12Q96FN5 646 aa7.29□□□□□ -1.24
NCK1-212ENST00000496489 PELP1Q8IZL8 1130 aaKnown RBP7.28□□□□□ -1.24
NCK1-212ENST00000496489 ATMINO43313 823 aaPredicted RBP7.27□□□□□ -1.25
NCK1-212ENST00000496489 ASTLQ6HA08 431 aaPredicted RBP7.27□□□□□ -1.25
NCK1-212ENST00000496489 PKD2Q13563 968 aa7.26□□□□□ -1.25
NCK1-212ENST00000496489 MAP3K13O43283 966 aa7.25□□□□□ -1.25
NCK1-212ENST00000496489 DCAF8L2P0C7V8 631 aa7.25□□□□□ -1.25
NCK1-212ENST00000496489 C7P10643 843 aa7.24□□□□□ -1.25
NCK1-212ENST00000496489 NUBP1P53384 320 aa7.24□□□□□ -1.25
NCK1-212ENST00000496489 POTEB2H3BUK9 544 aa7.23□□□□□ -1.25
NCK1-212ENST00000496489 SLC39A7Q92504 469 aa7.23□□□□□ -1.25
NCK1-212ENST00000496489 CIZ1Q9ULV3 898 aaPredicted RBP7.22□□□□□ -1.25
NCK1-212ENST00000496489 ECM2O94769 699 aaPredicted RBP7.21□□□□□ -1.26
NCK1-212ENST00000496489 ATN1P54259 1190 aaPredicted RBP7.21□□□□□ -1.26
NCK1-212ENST00000496489 METRNQ9UJH8 293 aa7.21□□□□□ -1.26
NCK1-212ENST00000496489 FAM212AQ96EL1 285 aa7.2□□□□□ -1.26
NCK1-212ENST00000496489 OTUD5Q96G74 571 aa7.2□□□□□ -1.26
NCK1-212ENST00000496489 SGIP1Q9BQI5 828 aa7.2□□□□□ -1.26
NCK1-212ENST00000496489 TIE1P35590 1138 aa7.19□□□□□ -1.26
NCK1-212ENST00000496489 BMP2KQ9NSY1 1161 aaPredicted RBP7.19□□□□□ -1.26
NCK1-212ENST00000496489 TRPC6Q9Y210 931 aa7.19□□□□□ -1.26
NCK1-212ENST00000496489 DCAF8Q5TAQ9 597 aa7.18□□□□□ -1.26
NCK1-212ENST00000496489 PCDHB13Q9Y5F0 798 aa7.18□□□□□ -1.26
NCK1-212ENST00000496489 SLC24A1O60721 1099 aa7.16□□□□□ -1.26
NCK1-212ENST00000496489 TTLL13PA6NNM8 815 aa7.14□□□□□ -1.27
NCK1-212ENST00000496489 MAMSTRQ6ZN01 415 aa7.14□□□□□ -1.27
NCK1-212ENST00000496489 RGL2O15211 777 aa7.13□□□□□ -1.27
NCK1-212ENST00000496489 GSE1Q14687 1217 aa7.13□□□□□ -1.27
NCK1-212ENST00000496489 IFNL1Q8IU54 200 aa7.13□□□□□ -1.27
NCK1-212ENST00000496489 POTEJP0CG39 1038 aa7.12□□□□□ -1.27
NCK1-212ENST00000496489 SEC24BO95487 1268 aa7.11□□□□□ -1.27
NCK1-212ENST00000496489 PYGBP11216 843 aa7.11□□□□□ -1.27
NCK1-212ENST00000496489 TRIM41Q8WV44 630 aa7.11□□□□□ -1.27
NCK1-212ENST00000496489 POTEFA5A3E0 1075 aa7.1□□□□□ -1.27
NCK1-212ENST00000496489 TRIM35Q9UPQ4 493 aa7.1□□□□□ -1.27
NCK1-212ENST00000496489 IER5LQ5T953 404 aa7.08□□□□□ -1.28
NCK1-212ENST00000496489 TMEM106CQ9BVX2 250 aa7.08□□□□□ -1.28
NCK1-212ENST00000496489 SCUBE2Q9NQ36 999 aa7.08□□□□□ -1.28
NCK1-212ENST00000496489 COLQQ9Y215 455 aaPredicted RBP7.07□□□□□ -1.28
NCK1-212ENST00000496489 PCDHB8Q9UN66 801 aa7.05□□□□□ -1.28
NCK1-212ENST00000496489 RNF25Q96BH1 459 aaPredicted RBP7.04□□□□□ -1.28
NCK1-212ENST00000496489 CHGAP10645 457 aaKnown RBP7.02□□□□□ -1.29
NCK1-212ENST00000496489 CHRM1P11229 460 aaPredicted RBP7.02□□□□□ -1.29
NCK1-212ENST00000496489 PLCB2Q00722 1185 aa7.02□□□□□ -1.29
NCK1-212ENST00000496489 RIOK3O14730 519 aaKnown RBP7.01□□□□□ -1.29
NCK1-212ENST00000496489 ZNF467Q7Z7K2 595 aaPredicted RBP7.01□□□□□ -1.29
NCK1-212ENST00000496489 FAM163AQ96GL9 167 aaPredicted RBP7.01□□□□□ -1.29
NCK1-212ENST00000496489 POTEMA6NI47 508 aa7□□□□□ -1.29
NCK1-212ENST00000496489 PLCG2P16885 1265 aa7□□□□□ -1.29
NCK1-212ENST00000496489 IRX5P78411 483 aaPredicted RBP6.99□□□□□ -1.29
NCK1-212ENST00000496489 BBXQ8WY36 941 aaPredicted RBP6.99□□□□□ -1.29
NCK1-212ENST00000496489 OCEL1Q9H607 264 aa6.99□□□□□ -1.29
NCK1-212ENST00000496489 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.99□□□□□ -1.29
NCK1-212ENST00000496489 POTEGQ6S5H5 508 aa6.98□□□□□ -1.29
NCK1-212ENST00000496489 TAOK2Q9UL54 1235 aa6.98□□□□□ -1.29
NCK1-212ENST00000496489 HS6ST3Q8IZP7 471 aa6.97□□□□□ -1.29
NCK1-212ENST00000496489 HAP1P54257 671 aaPredicted RBP6.96□□□□□ -1.3
NCK1-212ENST00000496489 GOLGA2Q08379 1002 aa6.96□□□□□ -1.3
NCK1-212ENST00000496489 VGFO15240 615 aaPredicted RBP6.95□□□□□ -1.3
NCK1-212ENST00000496489 CFAP44Q96MT7 982 aa6.95□□□□□ -1.3
NCK1-212ENST00000496489 PLSCR2Q9NRY7 297 aa6.95□□□□□ -1.3
NCK1-212ENST00000496489 STK25O00506 426 aa6.94□□□□□ -1.3
NCK1-212ENST00000496489 PSEN1P49768 467 aa6.94□□□□□ -1.3
NCK1-212ENST00000496489 MKRN3Q13064 507 aaKnown RBP6.94□□□□□ -1.3
NCK1-212ENST00000496489 PAXIP1Q6ZW49 1069 aaPredicted RBP6.94□□□□□ -1.3
NCK1-212ENST00000496489 SLAIN1Q8ND83 568 aa6.94□□□□□ -1.3
NCK1-212ENST00000496489 PCDH10Q9P2E7 1040 aa6.93□□□□□ -1.3
NCK1-212ENST00000496489 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.92□□□□□ -1.3
NCK1-212ENST00000496489 ZFP91Q96JP5 570 aaPredicted RBP6.92□□□□□ -1.3
NCK1-212ENST00000496489 PDAP1Q13442 181 aaKnown RBP6.91□□□□□ -1.3
NCK1-212ENST00000496489 LCE2DQ5TA82 110 aaPredicted RBP6.91□□□□□ -1.3
NCK1-212ENST00000496489 SPRYD3Q8NCJ5 442 aa6.9□□□□□ -1.3
NCK1-212ENST00000496489 BCL11BQ9C0K0 894 aaPredicted RBP6.9□□□□□ -1.3
NCK1-212ENST00000496489 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.9□□□□□ -1.3
NCK1-212ENST00000496489 STK24Q9Y6E0 443 aa6.9□□□□□ -1.3
NCK1-212ENST00000496489 L3MBTL3Q96JM7 780 aaPredicted RBP6.89□□□□□ -1.31
NCK1-212ENST00000496489 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.89□□□□□ -1.317e-7■■■■□ 26.2
NCK1-212ENST00000496489 PDCD7Q8N8D1 485 aaKnown RBP6.87□□□□□ -1.31
NCK1-212ENST00000496489 NKX1-1Q15270 411 aaPredicted RBP6.86□□□□□ -1.31
NCK1-212ENST00000496489 CABP2Q9NPB3 220 aa6.86□□□□□ -1.31
NCK1-212ENST00000496489 SNPHO15079 494 aa6.85□□□□□ -1.31
NCK1-212ENST00000496489 ST18O60284 1047 aa6.85□□□□□ -1.31
NCK1-212ENST00000496489 DNAJC5Q9H3Z4 198 aa6.85□□□□□ -1.31
NCK1-212ENST00000496489 C3orf67Q6ZVT6 689 aa6.83□□□□□ -1.32
NCK1-212ENST00000496489 ILDR1Q86SU0 546 aaPredicted RBP6.82□□□□□ -1.32
NCK1-212ENST00000496489 DPY19L2Q6NUT2 758 aa6.81□□□□□ -1.32
NCK1-212ENST00000496489 TSHZ2Q9NRE2 1034 aa6.81□□□□□ -1.32
NCK1-212ENST00000496489 G3V3G9 751 aa6.8□□□□□ -1.32
NCK1-212ENST00000496489 GTPBP6O43824 516 aaPredicted RBP6.8□□□□□ -1.32
NCK1-212ENST00000496489 CDAN1Q8IWY9 1227 aa6.8□□□□□ -1.32
NCK1-212ENST00000496489 VSIG10Q8N0Z9 540 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms