RNA–Protein interactions for RNA: ENST00000495640.1

COPS3-211, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 333 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-211ENST00000495640 RGL2O15211 777 aa7.31□□□□□ -1.24
COPS3-211ENST00000495640 FARP1Q9Y4F1 1045 aaPredicted RBP7.31□□□□□ -1.24
COPS3-211ENST00000495640 CD44P16070 742 aaKnown RBP7.3□□□□□ -1.24
COPS3-211ENST00000495640 PRKCSHP14314 528 aaPredicted RBP7.28□□□□□ -1.24
COPS3-211ENST00000495640 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.27□□□□□ -1.25
COPS3-211ENST00000495640 TAOK2Q9UL54 1235 aa7.27□□□□□ -1.25
COPS3-211ENST00000495640 PAXIP1Q6ZW49 1069 aaPredicted RBP7.26□□□□□ -1.25
COPS3-211ENST00000495640 PLCD3Q8N3E9 789 aa7.26□□□□□ -1.25
COPS3-211ENST00000495640 CREBZFQ9NS37 354 aa7.24□□□□□ -1.25
COPS3-211ENST00000495640 MIER1Q8N108 512 aa7.22□□□□□ -1.25
COPS3-211ENST00000495640 ZNF579Q8NAF0 562 aaKnown RBP7.22□□□□□ -1.25
COPS3-211ENST00000495640 CFAP44Q96MT7 982 aa7.22□□□□□ -1.25
COPS3-211ENST00000495640 CLCN6P51797 869 aa7.19□□□□□ -1.26
COPS3-211ENST00000495640 SPRYD3Q8NCJ5 442 aa7.19□□□□□ -1.26
COPS3-211ENST00000495640 TSHZ2Q9NRE2 1034 aa7.19□□□□□ -1.26
COPS3-211ENST00000495640 DNAJC5Q9H3Z4 198 aa7.17□□□□□ -1.26
COPS3-211ENST00000495640 GALR2O43603 387 aaPredicted RBP7.16□□□□□ -1.26
COPS3-211ENST00000495640 CHGAP10645 457 aaKnown RBP7.16□□□□□ -1.26
COPS3-211ENST00000495640 RNF25Q96BH1 459 aaPredicted RBP7.15□□□□□ -1.26
COPS3-211ENST00000495640 ZBTB47Q9UFB7 747 aaPredicted RBP7.15□□□□□ -1.26
COPS3-211ENST00000495640 ZRANB1Q9UGI0 708 aa7.15□□□□□ -1.26
COPS3-211ENST00000495640 CIZ1Q9ULV3 898 aaPredicted RBP7.15□□□□□ -1.26
COPS3-211ENST00000495640 MNX1P50219 401 aaPredicted RBP7.14□□□□□ -1.27
COPS3-211ENST00000495640 TPRNQ4KMQ1 711 aa7.14□□□□□ -1.27
COPS3-211ENST00000495640 HS6ST3Q8IZP7 471 aa7.13□□□□□ -1.27
COPS3-211ENST00000495640 TRIM41Q8WV44 630 aa7.13□□□□□ -1.27
COPS3-211ENST00000495640 DCBLD2Q96PD2 775 aa7.12□□□□□ -1.27
COPS3-211ENST00000495640 POTEB2H3BUK9 544 aa7.1□□□□□ -1.27
COPS3-211ENST00000495640 PLEKHG5O94827 1062 aa7.1□□□□□ -1.27
COPS3-211ENST00000495640 NUBP1P53384 320 aa7.09□□□□□ -1.27
COPS3-211ENST00000495640 PHF12Q96QT6 1004 aa7.09□□□□□ -1.27
COPS3-211ENST00000495640 OTUD5Q96G74 571 aa7.08□□□□□ -1.28
COPS3-211ENST00000495640 NKX1-1Q15270 411 aaPredicted RBP7.07□□□□□ -1.28
COPS3-211ENST00000495640 PELP1Q8IZL8 1130 aaKnown RBP7.06□□□□□ -1.28
COPS3-211ENST00000495640 GSE1Q14687 1217 aa7.05□□□□□ -1.28
COPS3-211ENST00000495640 GTPBP6O43824 516 aaPredicted RBP7.03□□□□□ -1.28
COPS3-211ENST00000495640 RIOK3O14730 519 aaKnown RBP7.01□□□□□ -1.29
COPS3-211ENST00000495640 POTEJP0CG39 1038 aa7□□□□□ -1.29
COPS3-211ENST00000495640 MS4A3Q96HJ5 214 aa7□□□□□ -1.29
COPS3-211ENST00000495640 PAK3O75914 559 aaPredicted RBP6.99□□□□□ -1.29
COPS3-211ENST00000495640 ASTLQ6HA08 431 aaPredicted RBP6.99□□□□□ -1.29
COPS3-211ENST00000495640 ATMINO43313 823 aaPredicted RBP6.97□□□□□ -1.29
COPS3-211ENST00000495640 CHRM1P11229 460 aaPredicted RBP6.97□□□□□ -1.29
COPS3-211ENST00000495640 NBR1Q14596 966 aa6.97□□□□□ -1.29
COPS3-211ENST00000495640 DCAF8Q5TAQ9 597 aa6.97□□□□□ -1.29
COPS3-211ENST00000495640 VGFO15240 615 aaPredicted RBP6.96□□□□□ -1.3
COPS3-211ENST00000495640 SGIP1Q9BQI5 828 aa6.96□□□□□ -1.3
COPS3-211ENST00000495640 STK25O00506 426 aa6.95□□□□□ -1.3
COPS3-211ENST00000495640 RASEFQ8IZ41 740 aa6.94□□□□□ -1.3
COPS3-211ENST00000495640 FAM212AQ96EL1 285 aa6.94□□□□□ -1.3
COPS3-211ENST00000495640 PLSCR2Q9NRY7 297 aa6.94□□□□□ -1.3
COPS3-211ENST00000495640 METRNQ9UJH8 293 aa6.94□□□□□ -1.3
COPS3-211ENST00000495640 CCDC61Q9Y6R9 512 aa6.94□□□□□ -1.3
COPS3-211ENST00000495640 LCE2DQ5TA82 110 aaPredicted RBP6.92□□□□□ -1.3
COPS3-211ENST00000495640 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.91□□□□□ -1.3
COPS3-211ENST00000495640 POTEFA5A3E0 1075 aa6.91□□□□□ -1.3
COPS3-211ENST00000495640 POTEMA6NI47 508 aa6.91□□□□□ -1.3
COPS3-211ENST00000495640 ZFP91Q96JP5 570 aaPredicted RBP6.91□□□□□ -1.3
COPS3-211ENST00000495640 ATN1P54259 1190 aaPredicted RBP6.9□□□□□ -1.3
COPS3-211ENST00000495640 SLC39A7Q92504 469 aa6.9□□□□□ -1.3
COPS3-211ENST00000495640 KIF12Q96FN5 646 aa6.9□□□□□ -1.3
COPS3-211ENST00000495640 BCL11BQ9C0K0 894 aaPredicted RBP6.9□□□□□ -1.3
COPS3-211ENST00000495640 TRPC6Q9Y210 931 aa6.9□□□□□ -1.3
COPS3-211ENST00000495640 C7P10643 843 aa6.89□□□□□ -1.31
COPS3-211ENST00000495640 POTEGQ6S5H5 508 aa6.89□□□□□ -1.31
COPS3-211ENST00000495640 TSPYL2Q9H2G4 693 aaPredicted RBP6.89□□□□□ -1.31
COPS3-211ENST00000495640 BMP2KQ9NSY1 1161 aaPredicted RBP6.87□□□□□ -1.31
COPS3-211ENST00000495640 STK24Q9Y6E0 443 aa6.87□□□□□ -1.31
COPS3-211ENST00000495640 PYGBP11216 843 aa6.86□□□□□ -1.31
COPS3-211ENST00000495640 RYDENQ9NUL5 291 aaKnown RBP6.85□□□□□ -1.31
COPS3-211ENST00000495640 MAP3K13O43283 966 aa6.83□□□□□ -1.32
COPS3-211ENST00000495640 TIE1P35590 1138 aa6.81□□□□□ -1.32
COPS3-211ENST00000495640 CADPS2Q86UW7 1296 aa6.81□□□□□ -1.32
COPS3-211ENST00000495640 MAMSTRQ6ZN01 415 aa6.8□□□□□ -1.32
COPS3-211ENST00000495640 COLQQ9Y215 455 aaPredicted RBP6.8□□□□□ -1.32
COPS3-211ENST00000495640 TTLL13PA6NNM8 815 aa6.79□□□□□ -1.32
COPS3-211ENST00000495640 P3H3Q8IVL6 736 aa6.79□□□□□ -1.32
COPS3-211ENST00000495640 TIMELESSQ9UNS1 1208 aa6.79□□□□□ -1.32
COPS3-211ENST00000495640 KCNV2Q8TDN2 545 aa6.78□□□□□ -1.32
COPS3-211ENST00000495640 ZNF467Q7Z7K2 595 aaPredicted RBP6.76□□□□□ -1.33
COPS3-211ENST00000495640 SCUBE2Q9NQ36 999 aa6.76□□□□□ -1.33
COPS3-211ENST00000495640 PCDH10Q9P2E7 1040 aa6.76□□□□□ -1.33
COPS3-211ENST00000495640 MFRPQ9BY79 579 aa6.75□□□□□ -1.33
COPS3-211ENST00000495640 PDAP1Q13442 181 aaKnown RBP6.74□□□□□ -1.33
COPS3-211ENST00000495640 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.74□□□□□ -1.33
COPS3-211ENST00000495640 GTF3C3Q9Y5Q9 886 aa6.74□□□□□ -1.33
COPS3-211ENST00000495640 TULP1O00294 542 aaPredicted RBP6.73□□□□□ -1.33
COPS3-211ENST00000495640 FAM163AQ96GL9 167 aaPredicted RBP6.73□□□□□ -1.33
COPS3-211ENST00000495640 TMEM132AQ24JP5 1023 aa6.72□□□□□ -1.33
COPS3-211ENST00000495640 PCDHB8Q9UN66 801 aa6.72□□□□□ -1.33
COPS3-211ENST00000495640 TRIM35Q9UPQ4 493 aa6.72□□□□□ -1.33
COPS3-211ENST00000495640 PCDHB13Q9Y5F0 798 aa6.72□□□□□ -1.33
COPS3-211ENST00000495640 IER5LQ5T953 404 aa6.71□□□□□ -1.34
COPS3-211ENST00000495640 LMOD2Q6P5Q4 547 aa6.71□□□□□ -1.34
COPS3-211ENST00000495640 PSEN1P49768 467 aa6.7□□□□□ -1.34
COPS3-211ENST00000495640 IFNL1Q8IU54 200 aa6.7□□□□□ -1.34
COPS3-211ENST00000495640 PPP1R37O75864 691 aa6.69□□□□□ -1.34
COPS3-211ENST00000495640 FBXO22Q8NEZ5 403 aa6.69□□□□□ -1.34
COPS3-211ENST00000495640 WDR70Q9NW82 654 aa6.69□□□□□ -1.34
COPS3-211ENST00000495640 SEC24BO95487 1268 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms