RNA–Protein interactions for RNA: ENST00000487846.1

TNIK-213, Transcript of TRAF2 and NCK interacting kinase, humanhuman

TSL 4

Gene TNIK, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-213ENST00000487846 PRKAR2AP13861 404 aaKnown RBP12.27□□□□□ -0.45
TNIK-213ENST00000487846 PAXIP1Q6ZW49 1069 aaPredicted RBP12.26□□□□□ -0.45
TNIK-213ENST00000487846 CLEC11AQ9Y240 323 aa12.26□□□□□ -0.45
TNIK-213ENST00000487846 GTF3C3Q9Y5Q9 886 aa12.26□□□□□ -0.45
TNIK-213ENST00000487846 IFNLR1Q8IU57 520 aaPredicted RBP12.25□□□□□ -0.45
TNIK-213ENST00000487846 PABPN1Q86U42 306 aaKnown RBP eCLIP12.23□□□□□ -0.45
TNIK-213ENST00000487846 CFAP44Q96MT7 982 aa12.22□□□□□ -0.45
TNIK-213ENST00000487846 POTEIP0CG38 1075 aa12.2□□□□□ -0.46
TNIK-213ENST00000487846 C19orf67A6NJJ6 358 aa12.17□□□□□ -0.46
TNIK-213ENST00000487846 NBR1Q14596 966 aa12.17□□□□□ -0.46
TNIK-213ENST00000487846 HOMEZQ8IX15 550 aa12.17□□□□□ -0.46
TNIK-213ENST00000487846 SPRYD3Q8NCJ5 442 aa12.12□□□□□ -0.47
TNIK-213ENST00000487846 NPM1P06748 294 aaKnown RBP eCLIP12.08□□□□□ -0.48
TNIK-213ENST00000487846 CHADLQ6NUI6 762 aa12.08□□□□□ -0.48
TNIK-213ENST00000487846 ECM2O94769 699 aaPredicted RBP12.06□□□□□ -0.48
TNIK-213ENST00000487846 TSHZ2Q9NRE2 1034 aa12.06□□□□□ -0.48
TNIK-213ENST00000487846 OTUD5Q96G74 571 aa12.04□□□□□ -0.48
TNIK-213ENST00000487846 PRR29P0C7W0 189 aa12.03□□□□□ -0.48
TNIK-213ENST00000487846 TMEM132AQ24JP5 1023 aa12.01□□□□□ -0.49
TNIK-213ENST00000487846 STAG3Q9UJ98 1225 aa11.99□□□□□ -0.49
TNIK-213ENST00000487846 SPOCK2Q92563 424 aa11.98□□□□□ -0.49
TNIK-213ENST00000487846 DNAJC5Q9H3Z4 198 aa11.98□□□□□ -0.49
TNIK-213ENST00000487846 C14orf37Q86TY3 774 aa11.94□□□□□ -0.5
TNIK-213ENST00000487846 KLHL34Q8N239 644 aa11.91□□□□□ -0.5
TNIK-213ENST00000487846 FARP1Q9Y4F1 1045 aaPredicted RBP11.89□□□□□ -0.51
TNIK-213ENST00000487846 CD44P16070 742 aaKnown RBP11.87□□□□□ -0.51
TNIK-213ENST00000487846 RGL2O15211 777 aa11.86□□□□□ -0.51
TNIK-213ENST00000487846 CREBZFQ9NS37 354 aa11.84□□□□□ -0.51
TNIK-213ENST00000487846 CHGAP10645 457 aaKnown RBP11.8□□□□□ -0.52
TNIK-213ENST00000487846 RANGAP1P46060 587 aaPredicted RBP11.77□□□□□ -0.53
TNIK-213ENST00000487846 CLCN6P51797 869 aa11.77□□□□□ -0.53
TNIK-213ENST00000487846 POTEB2H3BUK9 544 aa11.76□□□□□ -0.53
TNIK-213ENST00000487846 MNX1P50219 401 aaPredicted RBP11.75□□□□□ -0.53
TNIK-213ENST00000487846 LCE2DQ5TA82 110 aaPredicted RBP11.74□□□□□ -0.53
TNIK-213ENST00000487846 ZNF579Q8NAF0 562 aaKnown RBP11.7□□□□□ -0.54
TNIK-213ENST00000487846 MIER1Q8N108 512 aa11.69□□□□□ -0.54
TNIK-213ENST00000487846 ZRANB1Q9UGI0 708 aa11.66□□□□□ -0.54
TNIK-213ENST00000487846 HS6ST3Q8IZP7 471 aa11.65□□□□□ -0.54
TNIK-213ENST00000487846 PLCD3Q8N3E9 789 aa11.65□□□□□ -0.54
TNIK-213ENST00000487846 DCBLD2Q96PD2 775 aa11.63□□□□□ -0.55
TNIK-213ENST00000487846 PODXL2Q9NZ53 605 aa11.62□□□□□ -0.55
TNIK-213ENST00000487846 TRIM41Q8WV44 630 aa11.61□□□□□ -0.55
TNIK-213ENST00000487846 PLEKHG5O94827 1062 aa11.58□□□□□ -0.56
TNIK-213ENST00000487846 GALR2O43603 387 aaPredicted RBP11.56□□□□□ -0.56
TNIK-213ENST00000487846 CIZ1Q9ULV3 898 aaPredicted RBP11.56□□□□□ -0.56
TNIK-213ENST00000487846 ZBTB47Q9UFB7 747 aaPredicted RBP11.53□□□□□ -0.56
TNIK-213ENST00000487846 NUBP1P53384 320 aa11.52□□□□□ -0.57
TNIK-213ENST00000487846 SUPT5HO00267 1087 aaKnown RBP11.5□□□□□ -0.57
TNIK-213ENST00000487846 P3H3Q8IVL6 736 aa11.49□□□□□ -0.57
TNIK-213ENST00000487846 PAK3O75914 559 aaPredicted RBP11.48□□□□□ -0.57
TNIK-213ENST00000487846 CDAN1Q8IWY9 1227 aa11.48□□□□□ -0.57
TNIK-213ENST00000487846 FAM163AQ96GL9 167 aaPredicted RBP11.48□□□□□ -0.57
TNIK-213ENST00000487846 PHF12Q96QT6 1004 aa11.48□□□□□ -0.57
TNIK-213ENST00000487846 RASEFQ8IZ41 740 aa11.47□□□□□ -0.57
TNIK-213ENST00000487846 GTPBP6O43824 516 aaPredicted RBP11.43□□□□□ -0.58
TNIK-213ENST00000487846 BRPF1P55201 1214 aaPredicted RBP11.43□□□□□ -0.58
TNIK-213ENST00000487846 MMRN1Q13201 1228 aa11.42□□□□□ -0.58
TNIK-213ENST00000487846 LMOD2Q6P5Q4 547 aa11.4□□□□□ -0.58
TNIK-213ENST00000487846 NKX1-1Q15270 411 aaPredicted RBP11.39□□□□□ -0.59
TNIK-213ENST00000487846 PELP1Q8IZL8 1130 aaKnown RBP11.38□□□□□ -0.59
TNIK-213ENST00000487846 RYDENQ9NUL5 291 aaKnown RBP11.37□□□□□ -0.59
TNIK-213ENST00000487846 CCDC61Q9Y6R9 512 aa11.37□□□□□ -0.59
TNIK-213ENST00000487846 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.36□□□□□ -0.59
TNIK-213ENST00000487846 TSPYL2Q9H2G4 693 aaPredicted RBP11.35□□□□□ -0.59
TNIK-213ENST00000487846 MS4A3Q96HJ5 214 aa11.33□□□□□ -0.6
TNIK-213ENST00000487846 ASTLQ6HA08 431 aaPredicted RBP11.32□□□□□ -0.6
TNIK-213ENST00000487846 RNF25Q96BH1 459 aaPredicted RBP11.32□□□□□ -0.6
TNIK-213ENST00000487846 FAM212AQ96EL1 285 aa11.32□□□□□ -0.6
TNIK-213ENST00000487846 GSE1Q14687 1217 aa11.31□□□□□ -0.6
TNIK-213ENST00000487846 NEUROD2Q15784 382 aa11.31□□□□□ -0.6
TNIK-213ENST00000487846 POTEJP0CG39 1038 aa11.3□□□□□ -0.6
TNIK-213ENST00000487846 RIOK3O14730 519 aaKnown RBP11.29□□□□□ -0.6
TNIK-213ENST00000487846 NPM2Q86SE8 214 aaKnown RBP11.29□□□□□ -0.6
TNIK-213ENST00000487846 ATMINO43313 823 aaPredicted RBP11.28□□□□□ -0.6
TNIK-213ENST00000487846 UBTFP17480 764 aaKnown RBP11.28□□□□□ -0.6
TNIK-213ENST00000487846 DCAF8Q5TAQ9 597 aa11.28□□□□□ -0.6
TNIK-213ENST00000487846 SPNS2Q8IVW8 549 aa11.26□□□□□ -0.61
TNIK-213ENST00000487846 METRNQ9UJH8 293 aa11.26□□□□□ -0.61
TNIK-213ENST00000487846 STK25O00506 426 aa11.25□□□□□ -0.61
TNIK-213ENST00000487846 TRIM26Q12899 539 aaPredicted RBP11.25□□□□□ -0.61
TNIK-213ENST00000487846 KIF12Q96FN5 646 aa11.25□□□□□ -0.61
TNIK-213ENST00000487846 C7P10643 843 aa11.24□□□□□ -0.61
TNIK-213ENST00000487846 SLC39A7Q92504 469 aa11.24□□□□□ -0.61
TNIK-213ENST00000487846 WDR70Q9NW82 654 aa11.23□□□□□ -0.61
TNIK-213ENST00000487846 VGFO15240 615 aaPredicted RBP11.22□□□□□ -0.61
TNIK-213ENST00000487846 CHRM1P11229 460 aaPredicted RBP11.21□□□□□ -0.61
TNIK-213ENST00000487846 KCNV2Q8TDN2 545 aa11.2□□□□□ -0.62
TNIK-213ENST00000487846 MAP3K13O43283 966 aa11.19□□□□□ -0.62
TNIK-213ENST00000487846 PYGBP11216 843 aa11.18□□□□□ -0.62
TNIK-213ENST00000487846 ZC3H15Q8WU90 426 aaKnown RBP11.17□□□□□ -0.62
TNIK-213ENST00000487846 RSPH6AQ9H0K4 717 aa11.17□□□□□ -0.62
TNIK-213ENST00000487846 ATN1P54259 1190 aaPredicted RBP11.16□□□□□ -0.62
TNIK-213ENST00000487846 SGIP1Q9BQI5 828 aa11.16□□□□□ -0.62
TNIK-213ENST00000487846 ZMYND15Q9H091 742 aa11.16□□□□□ -0.62
TNIK-213ENST00000487846 MAMSTRQ6ZN01 415 aa11.14□□□□□ -0.63
TNIK-213ENST00000487846 SLC24A3Q9HC58 644 aa11.12□□□□□ -0.63
TNIK-213ENST00000487846 BMP2KQ9NSY1 1161 aaPredicted RBP11.12□□□□□ -0.63
TNIK-213ENST00000487846 TRPC6Q9Y210 931 aa11.12□□□□□ -0.63
TNIK-213ENST00000487846 IFNL1Q8IU54 200 aa11.11□□□□□ -0.63
TNIK-213ENST00000487846 PCDHB13Q9Y5F0 798 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms