RNA–Protein interactions for RNA: ENST00000485194.1

ATP13A3-208, Transcript of ATPase 13A3, humanhuman

TSL 5

Gene ATP13A3, Length 586 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-208ENST00000485194 NUBP1P53384 320 aa12.73□□□□□ -0.37
ATP13A3-208ENST00000485194 FAM212AQ96EL1 285 aa12.72□□□□□ -0.37
ATP13A3-208ENST00000485194 MNX1P50219 401 aaPredicted RBP12.71□□□□□ -0.37
ATP13A3-208ENST00000485194 TRIM41Q8WV44 630 aa12.7□□□□□ -0.38
ATP13A3-208ENST00000485194 FARP1Q9Y4F1 1045 aaPredicted RBP12.65□□□□□ -0.38
ATP13A3-208ENST00000485194 SLC24A1O60721 1099 aa12.64□□□□□ -0.39
ATP13A3-208ENST00000485194 RGL2O15211 777 aa12.63□□□□□ -0.39
ATP13A3-208ENST00000485194 RASEFQ8IZ41 740 aa12.63□□□□□ -0.39
ATP13A3-208ENST00000485194 TSPYL2Q9H2G4 693 aaPredicted RBP12.57□□□□□ -0.4
ATP13A3-208ENST00000485194 POTEIP0CG38 1075 aa12.53□□□□□ -0.4
ATP13A3-208ENST00000485194 PAK3O75914 559 aaPredicted RBP12.51□□□□□ -0.41
ATP13A3-208ENST00000485194 PYGBP11216 843 aa12.51□□□□□ -0.41
ATP13A3-208ENST00000485194 TAOK2Q9UL54 1235 aa12.51□□□□□ -0.41
ATP13A3-208ENST00000485194 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.5□□□□□ -0.41
ATP13A3-208ENST00000485194 CHGAP10645 457 aaKnown RBP12.49□□□□□ -0.41
ATP13A3-208ENST00000485194 RIOK3O14730 519 aaKnown RBP12.47□□□□□ -0.41
ATP13A3-208ENST00000485194 CHRM1P11229 460 aaPredicted RBP12.47□□□□□ -0.41
ATP13A3-208ENST00000485194 BBXQ8WY36 941 aaPredicted RBP12.46□□□□□ -0.41
ATP13A3-208ENST00000485194 PLSCR2Q9NRY7 297 aa12.46□□□□□ -0.41
ATP13A3-208ENST00000485194 CD44P16070 742 aaKnown RBP12.45□□□□□ -0.42
ATP13A3-208ENST00000485194 PLCB2Q00722 1185 aa12.45□□□□□ -0.42
ATP13A3-208ENST00000485194 RNF25Q96BH1 459 aaPredicted RBP12.43□□□□□ -0.42
ATP13A3-208ENST00000485194 VGFO15240 615 aaPredicted RBP12.39□□□□□ -0.43
ATP13A3-208ENST00000485194 CLCN6P51797 869 aa12.37□□□□□ -0.43
ATP13A3-208ENST00000485194 CFAP44Q96MT7 982 aa12.37□□□□□ -0.43
ATP13A3-208ENST00000485194 HAP1P54257 671 aaPredicted RBP12.36□□□□□ -0.43
ATP13A3-208ENST00000485194 PAXIP1Q6ZW49 1069 aaPredicted RBP12.36□□□□□ -0.43
ATP13A3-208ENST00000485194 STK25O00506 426 aa12.35□□□□□ -0.43
ATP13A3-208ENST00000485194 ZNF467Q7Z7K2 595 aaPredicted RBP12.35□□□□□ -0.43
ATP13A3-208ENST00000485194 HS6ST3Q8IZP7 471 aa12.35□□□□□ -0.43
ATP13A3-208ENST00000485194 ZRANB1Q9UGI0 708 aa12.35□□□□□ -0.43
ATP13A3-208ENST00000485194 CCDC61Q9Y6R9 512 aa12.35□□□□□ -0.43
ATP13A3-208ENST00000485194 DCBLD2Q96PD2 775 aa12.34□□□□□ -0.43
ATP13A3-208ENST00000485194 SPRYD3Q8NCJ5 442 aa12.31□□□□□ -0.44
ATP13A3-208ENST00000485194 STK24Q9Y6E0 443 aa12.3□□□□□ -0.44
ATP13A3-208ENST00000485194 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.29□□□□□ -0.44
ATP13A3-208ENST00000485194 ZFP91Q96JP5 570 aaPredicted RBP12.29□□□□□ -0.44
ATP13A3-208ENST00000485194 PCDHB13Q9Y5F0 798 aa12.29□□□□□ -0.44
ATP13A3-208ENST00000485194 BCL11BQ9C0K0 894 aaPredicted RBP12.28□□□□□ -0.44
ATP13A3-208ENST00000485194 PCDHB8Q9UN66 801 aa12.28□□□□□ -0.44
ATP13A3-208ENST00000485194 PDAP1Q13442 181 aaKnown RBP12.26□□□□□ -0.45
ATP13A3-208ENST00000485194 SGIP1Q9BQI5 828 aa12.26□□□□□ -0.45
ATP13A3-208ENST00000485194 ZNF579Q8NAF0 562 aaKnown RBP12.25□□□□□ -0.45
ATP13A3-208ENST00000485194 MAP3K13O43283 966 aa12.24□□□□□ -0.45
ATP13A3-208ENST00000485194 KIF12Q96FN5 646 aa12.23□□□□□ -0.45
ATP13A3-208ENST00000485194 PHF12Q96QT6 1004 aa12.22□□□□□ -0.45
ATP13A3-208ENST00000485194 PSEN1P49768 467 aa12.2□□□□□ -0.46
ATP13A3-208ENST00000485194 IFNL1Q8IU54 200 aa12.2□□□□□ -0.46
ATP13A3-208ENST00000485194 DNAJC5Q9H3Z4 198 aa12.18□□□□□ -0.46
ATP13A3-208ENST00000485194 OTUD5Q96G74 571 aa12.17□□□□□ -0.46
ATP13A3-208ENST00000485194 NKX1-1Q15270 411 aaPredicted RBP12.14□□□□□ -0.47
ATP13A3-208ENST00000485194 RYDENQ9NUL5 291 aaKnown RBP12.14□□□□□ -0.47
ATP13A3-208ENST00000485194 GALR2O43603 387 aaPredicted RBP12.13□□□□□ -0.47
ATP13A3-208ENST00000485194 POTEB2H3BUK9 544 aa12.12□□□□□ -0.47
ATP13A3-208ENST00000485194 VSIG10Q8N0Z9 540 aa12.1□□□□□ -0.47
ATP13A3-208ENST00000485194 TSHZ2Q9NRE2 1034 aa12.08□□□□□ -0.48
ATP13A3-208ENST00000485194 POTEMA6NI47 508 aa12.07□□□□□ -0.48
ATP13A3-208ENST00000485194 GTPBP6O43824 516 aaPredicted RBP12.07□□□□□ -0.48
ATP13A3-208ENST00000485194 MS4A3Q96HJ5 214 aa12.07□□□□□ -0.48
ATP13A3-208ENST00000485194 CABP2Q9NPB3 220 aa12.07□□□□□ -0.48
ATP13A3-208ENST00000485194 GOLGA2Q08379 1002 aa12.06□□□□□ -0.48
ATP13A3-208ENST00000485194 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
ATP13A3-208ENST00000485194 POTEGQ6S5H5 508 aa12.02□□□□□ -0.49
ATP13A3-208ENST00000485194 EFCAB3Q8N7B9 438 aa12.01□□□□□ -0.49
ATP13A3-208ENST00000485194 SOX12O15370 315 aa11.97□□□□□ -0.49
ATP13A3-208ENST00000485194 PELP1Q8IZL8 1130 aaKnown RBP11.97□□□□□ -0.49
ATP13A3-208ENST00000485194 TRPC6Q9Y210 931 aa11.97□□□□□ -0.49
ATP13A3-208ENST00000485194 NLRP6P59044 892 aa11.96□□□□□ -0.49
ATP13A3-208ENST00000485194 MKRN3Q13064 507 aaKnown RBP11.96□□□□□ -0.49
ATP13A3-208ENST00000485194 KDM2AQ9Y2K7 1162 aa11.95□□□□□ -0.5
ATP13A3-208ENST00000485194 TIE1P35590 1138 aa11.94□□□□□ -0.5
ATP13A3-208ENST00000485194 MFRPQ9BY79 579 aa11.94□□□□□ -0.5
ATP13A3-208ENST00000485194 PHF8Q9UPP1 1060 aa11.93□□□□□ -0.5
ATP13A3-208ENST00000485194 TTLL13PA6NNM8 815 aa11.9□□□□□ -0.5
ATP13A3-208ENST00000485194 BMP2KQ9NSY1 1161 aaPredicted RBP11.89□□□□□ -0.51
ATP13A3-208ENST00000485194 PCDH10Q9P2E7 1040 aa11.89□□□□□ -0.51
ATP13A3-208ENST00000485194 FBXO22Q8NEZ5 403 aa11.85□□□□□ -0.51
ATP13A3-208ENST00000485194 TRIM35Q9UPQ4 493 aa11.85□□□□□ -0.51
ATP13A3-208ENST00000485194 POTEJP0CG39 1038 aa11.84□□□□□ -0.51
ATP13A3-208ENST00000485194 METRNQ9UJH8 293 aa11.84□□□□□ -0.51
ATP13A3-208ENST00000485194 ASTLQ6HA08 431 aaPredicted RBP11.82□□□□□ -0.52
ATP13A3-208ENST00000485194 BCANQ96GW7 911 aa11.82□□□□□ -0.52
ATP13A3-208ENST00000485194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.82□□□□□ -0.522e-10■■■□□ 17.7
ATP13A3-208ENST00000485194 PPP1R37O75864 691 aa11.81□□□□□ -0.52
ATP13A3-208ENST00000485194 C7P10643 843 aa11.81□□□□□ -0.52
ATP13A3-208ENST00000485194 SLC39A7Q92504 469 aa11.81□□□□□ -0.52
ATP13A3-208ENST00000485194 ATMINO43313 823 aaPredicted RBP11.8□□□□□ -0.52
ATP13A3-208ENST00000485194 WDR70Q9NW82 654 aa11.79□□□□□ -0.52
ATP13A3-208ENST00000485194 ATN1P54259 1190 aaPredicted RBP11.78□□□□□ -0.52
ATP13A3-208ENST00000485194 MAMSTRQ6ZN01 415 aa11.77□□□□□ -0.53
ATP13A3-208ENST00000485194 FAM163AQ96GL9 167 aaPredicted RBP11.77□□□□□ -0.53
ATP13A3-208ENST00000485194 MS4A4AQ96JQ5 239 aa11.76□□□□□ -0.53
ATP13A3-208ENST00000485194 LCE2DQ5TA82 110 aaPredicted RBP11.75□□□□□ -0.53
ATP13A3-208ENST00000485194 CADPS2Q86UW7 1296 aa11.74□□□□□ -0.53
ATP13A3-208ENST00000485194 G3V3G9 751 aa11.7□□□□□ -0.54
ATP13A3-208ENST00000485194 NBR1Q14596 966 aa11.7□□□□□ -0.54
ATP13A3-208ENST00000485194 PLCG2P16885 1265 aa11.69□□□□□ -0.54
ATP13A3-208ENST00000485194 IER5LQ5T953 404 aa11.69□□□□□ -0.54
ATP13A3-208ENST00000485194 SCUBE2Q9NQ36 999 aa11.68□□□□□ -0.54
ATP13A3-208ENST00000485194 SEC24BO95487 1268 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms