RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 PLCD3Q8N3E9 789 aa10□□□□□ -0.81
XPA-203ENST00000485042 ZNF579Q8NAF0 562 aaKnown RBP9.97□□□□□ -0.81
XPA-203ENST00000485042 ECM2O94769 699 aaPredicted RBP9.96□□□□□ -0.82
XPA-203ENST00000485042 POTEGQ6S5H5 508 aa9.95□□□□□ -0.82
XPA-203ENST00000485042 MIER1Q8N108 512 aa9.95□□□□□ -0.82
XPA-203ENST00000485042 ZRANB1Q9UGI0 708 aa9.94□□□□□ -0.82
XPA-203ENST00000485042 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.9□□□□□ -0.82
XPA-203ENST00000485042 GALR2O43603 387 aaPredicted RBP9.88□□□□□ -0.83
XPA-203ENST00000485042 OTUD5Q96G74 571 aa9.88□□□□□ -0.83
XPA-203ENST00000485042 PLEKHG5O94827 1062 aa9.87□□□□□ -0.83
XPA-203ENST00000485042 BBXQ8WY36 941 aaPredicted RBP9.87□□□□□ -0.83
XPA-203ENST00000485042 CREBZFQ9NS37 354 aa9.87□□□□□ -0.83
XPA-203ENST00000485042 VSIG10Q8N0Z9 540 aa9.85□□□□□ -0.83
XPA-203ENST00000485042 POTEB2H3BUK9 544 aa9.83□□□□□ -0.84
XPA-203ENST00000485042 PAXIP1Q6ZW49 1069 aaPredicted RBP9.83□□□□□ -0.84
XPA-203ENST00000485042 ZBTB47Q9UFB7 747 aaPredicted RBP9.83□□□□□ -0.84
XPA-203ENST00000485042 RGL2O15211 777 aa9.82□□□□□ -0.84
XPA-203ENST00000485042 NPM1P06748 294 aaKnown RBP eCLIP9.82□□□□□ -0.84
XPA-203ENST00000485042 CIZ1Q9ULV3 898 aaPredicted RBP9.82□□□□□ -0.84
XPA-203ENST00000485042 BCANQ96GW7 911 aa9.81□□□□□ -0.84
XPA-203ENST00000485042 CFAP44Q96MT7 982 aa9.81□□□□□ -0.84
XPA-203ENST00000485042 PCDH10Q9P2E7 1040 aa9.78□□□□□ -0.84
XPA-203ENST00000485042 PAK3O75914 559 aaPredicted RBP9.77□□□□□ -0.85
XPA-203ENST00000485042 PHF12Q96QT6 1004 aa9.76□□□□□ -0.85
XPA-203ENST00000485042 CHGAP10645 457 aaKnown RBP9.73□□□□□ -0.85
XPA-203ENST00000485042 PELP1Q8IZL8 1130 aaKnown RBP9.73□□□□□ -0.85
XPA-203ENST00000485042 SPRYD3Q8NCJ5 442 aa9.73□□□□□ -0.85
XPA-203ENST00000485042 TRIM41Q8WV44 630 aa9.7□□□□□ -0.86
XPA-203ENST00000485042 KDM2AQ9Y2K7 1162 aa9.7□□□□□ -0.86
XPA-203ENST00000485042 METRNQ9UJH8 293 aa9.66□□□□□ -0.86
XPA-203ENST00000485042 GSE1Q14687 1217 aa9.65□□□□□ -0.86
XPA-203ENST00000485042 ASTLQ6HA08 431 aaPredicted RBP9.65□□□□□ -0.86
XPA-203ENST00000485042 TSHZ2Q9NRE2 1034 aa9.65□□□□□ -0.86
XPA-203ENST00000485042 MNX1P50219 401 aaPredicted RBP9.64□□□□□ -0.87
XPA-203ENST00000485042 C7P10643 843 aa9.63□□□□□ -0.87
XPA-203ENST00000485042 SLC39A7Q92504 469 aa9.63□□□□□ -0.87
XPA-203ENST00000485042 TAOK2Q9UL54 1235 aa9.63□□□□□ -0.87
XPA-203ENST00000485042 ATMINO43313 823 aaPredicted RBP9.62□□□□□ -0.87
XPA-203ENST00000485042 POTEJP0CG39 1038 aa9.62□□□□□ -0.87
XPA-203ENST00000485042 MS4A3Q96HJ5 214 aa9.62□□□□□ -0.87
XPA-203ENST00000485042 PRKCSHP14314 528 aaPredicted RBP9.61□□□□□ -0.87
XPA-203ENST00000485042 DCAF8Q5TAQ9 597 aa9.6□□□□□ -0.87
XPA-203ENST00000485042 MAMSTRQ6ZN01 415 aa9.6□□□□□ -0.87
XPA-203ENST00000485042 HS6ST3Q8IZP7 471 aa9.59□□□□□ -0.87
XPA-203ENST00000485042 NUBP1P53384 320 aa9.58□□□□□ -0.88
XPA-203ENST00000485042 LCE2DQ5TA82 110 aaPredicted RBP9.56□□□□□ -0.88
XPA-203ENST00000485042 RNF25Q96BH1 459 aaPredicted RBP9.56□□□□□ -0.88
XPA-203ENST00000485042 RIOK3O14730 519 aaKnown RBP9.53□□□□□ -0.88
XPA-203ENST00000485042 FAM212AQ96EL1 285 aa9.53□□□□□ -0.88
XPA-203ENST00000485042 TPRNQ4KMQ1 711 aa9.52□□□□□ -0.89
XPA-203ENST00000485042 FAM163AQ96GL9 167 aaPredicted RBP9.52□□□□□ -0.89
XPA-203ENST00000485042 SCUBE2Q9NQ36 999 aa9.52□□□□□ -0.89
XPA-203ENST00000485042 ATN1P54259 1190 aaPredicted RBP9.51□□□□□ -0.89
XPA-203ENST00000485042 DNAJC5Q9H3Z4 198 aa9.49□□□□□ -0.89
XPA-203ENST00000485042 TSPYL2Q9H2G4 693 aaPredicted RBP9.48□□□□□ -0.89
XPA-203ENST00000485042 STK25O00506 426 aa9.47□□□□□ -0.89
XPA-203ENST00000485042 VGFO15240 615 aaPredicted RBP9.46□□□□□ -0.9
XPA-203ENST00000485042 CCDC61Q9Y6R9 512 aa9.46□□□□□ -0.9
XPA-203ENST00000485042 NBR1Q14596 966 aa9.45□□□□□ -0.9
XPA-203ENST00000485042 NKX1-1Q15270 411 aaPredicted RBP9.45□□□□□ -0.9
XPA-203ENST00000485042 POTEFA5A3E0 1075 aa9.44□□□□□ -0.9
XPA-203ENST00000485042 KIF12Q96FN5 646 aa9.44□□□□□ -0.9
XPA-203ENST00000485042 CHRM1P11229 460 aaPredicted RBP9.43□□□□□ -0.9
XPA-203ENST00000485042 RASEFQ8IZ41 740 aa9.43□□□□□ -0.9
XPA-203ENST00000485042 BMP2KQ9NSY1 1161 aaPredicted RBP9.43□□□□□ -0.9
XPA-203ENST00000485042 GTPBP6O43824 516 aaPredicted RBP9.42□□□□□ -0.9
XPA-203ENST00000485042 PYGBP11216 843 aa9.39□□□□□ -0.91
XPA-203ENST00000485042 TRPC6Q9Y210 931 aa9.39□□□□□ -0.91
XPA-203ENST00000485042 STK24Q9Y6E0 443 aa9.39□□□□□ -0.91
XPA-203ENST00000485042 TIE1P35590 1138 aa9.38□□□□□ -0.91
XPA-203ENST00000485042 BCL11BQ9C0K0 894 aaPredicted RBP9.38□□□□□ -0.91
XPA-203ENST00000485042 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.37□□□□□ -0.91
XPA-203ENST00000485042 ZFP91Q96JP5 570 aaPredicted RBP9.37□□□□□ -0.91
XPA-203ENST00000485042 SGIP1Q9BQI5 828 aa9.36□□□□□ -0.91
XPA-203ENST00000485042 MAP3K13O43283 966 aa9.35□□□□□ -0.91
XPA-203ENST00000485042 RYDENQ9NUL5 291 aaKnown RBP9.35□□□□□ -0.91
XPA-203ENST00000485042 CDAN1Q8IWY9 1227 aa9.34□□□□□ -0.91
XPA-203ENST00000485042 COLQQ9Y215 455 aaPredicted RBP9.34□□□□□ -0.91
XPA-203ENST00000485042 SEC24BO95487 1268 aa9.32□□□□□ -0.92
XPA-203ENST00000485042 TTLL13PA6NNM8 815 aa9.31□□□□□ -0.92
XPA-203ENST00000485042 IER5LQ5T953 404 aa9.27□□□□□ -0.93
XPA-203ENST00000485042 ZNF467Q7Z7K2 595 aaPredicted RBP9.26□□□□□ -0.93
XPA-203ENST00000485042 TRIM35Q9UPQ4 493 aa9.25□□□□□ -0.93
XPA-203ENST00000485042 SLAIN1Q8ND83 568 aa9.24□□□□□ -0.93
XPA-203ENST00000485042 ST18O60284 1047 aa9.23□□□□□ -0.93
XPA-203ENST00000485042 MMRN1Q13201 1228 aa9.21□□□□□ -0.94
XPA-203ENST00000485042 PDAP1Q13442 181 aaKnown RBP9.21□□□□□ -0.94
XPA-203ENST00000485042 PCDHB13Q9Y5F0 798 aa9.2□□□□□ -0.94
XPA-203ENST00000485042 P3H3Q8IVL6 736 aa9.19□□□□□ -0.94
XPA-203ENST00000485042 PCDHB8Q9UN66 801 aa9.19□□□□□ -0.94
XPA-203ENST00000485042 WDR70Q9NW82 654 aa9.18□□□□□ -0.94
XPA-203ENST00000485042 PSEN1P49768 467 aa9.15□□□□□ -0.94
XPA-203ENST00000485042 PLCG2P16885 1265 aa9.14□□□□□ -0.95
XPA-203ENST00000485042 IFNL1Q8IU54 200 aa9.13□□□□□ -0.95
XPA-203ENST00000485042 SPNS2Q8IVW8 549 aa9.13□□□□□ -0.95
XPA-203ENST00000485042 CADPS2Q86UW7 1296 aa9.12□□□□□ -0.95
XPA-203ENST00000485042 TMEM106CQ9BVX2 250 aa9.12□□□□□ -0.95
XPA-203ENST00000485042 TMEM121BQ9BXQ6 578 aaPredicted RBP9.11□□□□□ -0.95
XPA-203ENST00000485042 IRX5P78411 483 aaPredicted RBP9.1□□□□□ -0.95
XPA-203ENST00000485042 MFRPQ9BY79 579 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms