RNA–Protein interactions for RNA: ENST00000477047.6

SPATA9-204, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-204ENST00000477047 CLCN6P51797 869 aa10.29□□□□□ -0.76
SPATA9-204ENST00000477047 CLSPNQ9HAW4 1339 aa10.25□□□□□ -0.77
SPATA9-204ENST00000477047 KLHL34Q8N239 644 aa10.25□□□□□ -0.77
SPATA9-204ENST00000477047 LCE2DQ5TA82 110 aaPredicted RBP10.24□□□□□ -0.77
SPATA9-204ENST00000477047 NEUROD1Q13562 356 aa10.22□□□□□ -0.77
SPATA9-204ENST00000477047 AMER1Q5JTC6 1135 aaPredicted RBP10.22□□□□□ -0.77
SPATA9-204ENST00000477047 TIMELESSQ9UNS1 1208 aa10.22□□□□□ -0.77
SPATA9-204ENST00000477047 ANO8Q9HCE9 1232 aaPredicted RBP10.22□□□□□ -0.77
SPATA9-204ENST00000477047 PDIA4P13667 645 aaKnown RBP10.21□□□□□ -0.78
SPATA9-204ENST00000477047 ATXN8OSP0DMR3 200 aa10.2□□□□□ -0.78
SPATA9-204ENST00000477047 PDE4CQ08493 712 aa10.13□□□□□ -0.79
SPATA9-204ENST00000477047 FKBP8Q14318 412 aa10.1□□□□□ -0.79
SPATA9-204ENST00000477047 FAM163AQ96GL9 167 aaPredicted RBP10.1□□□□□ -0.79
SPATA9-204ENST00000477047 CLEC11AQ9Y240 323 aa10.1□□□□□ -0.79
SPATA9-204ENST00000477047 CCDC180Q9P1Z9 1646 aa10.09□□□□□ -0.79
SPATA9-204ENST00000477047 CDAN1Q8IWY9 1227 aa10.09□□□□□ -0.79
SPATA9-204ENST00000477047 CD44P16070 742 aaKnown RBP10.08□□□□□ -0.8
SPATA9-204ENST00000477047 SPDYE1Q8NFV5 336 aaPredicted RBP10.08□□□□□ -0.8
SPATA9-204ENST00000477047 TAF7LQ5H9L4 462 aa10.07□□□□□ -0.8
SPATA9-204ENST00000477047 CHADLQ6NUI6 762 aa10.07□□□□□ -0.8
SPATA9-204ENST00000477047 TULP1O00294 542 aaPredicted RBP10.03□□□□□ -0.8
SPATA9-204ENST00000477047 FGD1P98174 961 aa10.02□□□□□ -0.81
SPATA9-204ENST00000477047 PCGF6Q9BYE7 350 aa10.02□□□□□ -0.81
SPATA9-204ENST00000477047 MMRN1Q13201 1228 aa10.01□□□□□ -0.81
SPATA9-204ENST00000477047 GLIPR1L2Q4G1C9 344 aa10.01□□□□□ -0.81
SPATA9-204ENST00000477047 DCAF1Q9Y4B6 1507 aa10.01□□□□□ -0.81
SPATA9-204ENST00000477047 FBLN2P98095 1184 aa9.98□□□□□ -0.81
SPATA9-204ENST00000477047 FBXO3Q9UK99 471 aa9.98□□□□□ -0.81
SPATA9-204ENST00000477047 SALL2Q9Y467 1007 aaPredicted RBP9.97□□□□□ -0.81
SPATA9-204ENST00000477047 ZNF326Q5BKZ1 582 aaKnown RBP9.96□□□□□ -0.82
SPATA9-204ENST00000477047 MKRN4PQ13434 485 aaPredicted RBP9.95□□□□□ -0.82
SPATA9-204ENST00000477047 NPM2Q86SE8 214 aaKnown RBP9.95□□□□□ -0.82
SPATA9-204ENST00000477047 BRD2P25440 801 aaKnown RBP9.92□□□□□ -0.82
SPATA9-204ENST00000477047 MAMSTRQ6ZN01 415 aa9.92□□□□□ -0.82
SPATA9-204ENST00000477047 SPDYE2BA6NHP3 402 aa9.91□□□□□ -0.82
SPATA9-204ENST00000477047 SPDYE6P0CI01 402 aa9.91□□□□□ -0.82
SPATA9-204ENST00000477047 SPDYE2Q495Y8 402 aa9.91□□□□□ -0.82
SPATA9-204ENST00000477047 TSHZ2Q9NRE2 1034 aa9.91□□□□□ -0.82
SPATA9-204ENST00000477047 POTEJP0CG39 1038 aa9.9□□□□□ -0.82
SPATA9-204ENST00000477047 CDK11AQ9UQ88 783 aaPredicted RBP9.9□□□□□ -0.82
SPATA9-204ENST00000477047 ZNF579Q8NAF0 562 aaKnown RBP9.89□□□□□ -0.83
SPATA9-204ENST00000477047 DCAF8L2P0C7V8 631 aa9.88□□□□□ -0.83
SPATA9-204ENST00000477047 AAMPQ13685 434 aa9.88□□□□□ -0.83
SPATA9-204ENST00000477047 SPNS2Q8IVW8 549 aa9.88□□□□□ -0.83
SPATA9-204ENST00000477047 RSPH6AQ9H0K4 717 aa9.87□□□□□ -0.83
SPATA9-204ENST00000477047 TAOK2Q9UL54 1235 aa9.87□□□□□ -0.83
SPATA9-204ENST00000477047 RSPH4AQ5TD94 716 aa9.85□□□□□ -0.83
SPATA9-204ENST00000477047 GALR2O43603 387 aaPredicted RBP9.84□□□□□ -0.83
SPATA9-204ENST00000477047 BCL11BQ9C0K0 894 aaPredicted RBP9.81□□□□□ -0.84
SPATA9-204ENST00000477047 ZNF692Q9BU19 519 aaPredicted RBP9.8□□□□□ -0.84
SPATA9-204ENST00000477047 SSUH2Q9Y2M2 353 aa9.8□□□□□ -0.84
SPATA9-204ENST00000477047 TRIM26Q12899 539 aaPredicted RBP9.8□□□□□ -0.84
SPATA9-204ENST00000477047 FARP1Q9Y4F1 1045 aaPredicted RBP9.79□□□□□ -0.84
SPATA9-204ENST00000477047 MYO15BQ96JP2 1530 aa9.79□□□□□ -0.84
SPATA9-204ENST00000477047 CCDC136Q96JN2 1154 aa9.77□□□□□ -0.85
SPATA9-204ENST00000477047 C14orf37Q86TY3 774 aa9.76□□□□□ -0.85
SPATA9-204ENST00000477047 SCUBE2Q9NQ36 999 aa9.76□□□□□ -0.85
SPATA9-204ENST00000477047 DEKP35659 375 aaKnown RBP9.75□□□□□ -0.85
SPATA9-204ENST00000477047 BCANQ96GW7 911 aa9.75□□□□□ -0.85
SPATA9-204ENST00000477047 CHMP4AQ9BY43 222 aa9.75□□□□□ -0.85
SPATA9-204ENST00000477047 ZMYND15Q9H091 742 aa9.75□□□□□ -0.85
SPATA9-204ENST00000477047 PRR29P0C7W0 189 aa9.75□□□□□ -0.85
SPATA9-204ENST00000477047 BCCIPQ9P287 314 aaKnown RBP eCLIP9.74□□□□□ -0.85
SPATA9-204ENST00000477047 METRNQ9UJH8 293 aa9.74□□□□□ -0.85
SPATA9-204ENST00000477047 HSP90B1P14625 803 aaKnown RBP9.73□□□□□ -0.85
SPATA9-204ENST00000477047 RBM10P98175 930 aaKnown RBP9.72□□□□□ -0.85
SPATA9-204ENST00000477047 ZRANB1Q9UGI0 708 aa9.72□□□□□ -0.85
SPATA9-204ENST00000477047 FANCIQ9NVI1 1328 aa9.71□□□□□ -0.86
SPATA9-204ENST00000477047 C7P10643 843 aa9.67□□□□□ -0.86
SPATA9-204ENST00000477047 CDK11BP21127 795 aaKnown RBP9.67□□□□□ -0.86
SPATA9-204ENST00000477047 PABPN1Q86U42 306 aaKnown RBP eCLIP9.67□□□□□ -0.86
SPATA9-204ENST00000477047 DIEXFQ68CQ4 756 aaKnown RBP9.66□□□□□ -0.86
SPATA9-204ENST00000477047 SLC39A7Q92504 469 aa9.66□□□□□ -0.86
SPATA9-204ENST00000477047 SUPT16HQ9Y5B9 1047 aaKnown RBP9.66□□□□□ -0.86
SPATA9-204ENST00000477047 HMGB1P09429 215 aaKnown RBP9.65□□□□□ -0.86
SPATA9-204ENST00000477047 NAP1L5Q96NT1 182 aaPredicted RBP9.65□□□□□ -0.86
SPATA9-204ENST00000477047 LOC105371045A0A1W2PR82 267 aa9.64□□□□□ -0.87
SPATA9-204ENST00000477047 YTHDC1Q96MU7 727 aaKnown RBP9.64□□□□□ -0.87
SPATA9-204ENST00000477047 C11orf95C9JLR9 678 aaPredicted RBP9.62□□□□□ -0.87
SPATA9-204ENST00000477047 TPRNQ4KMQ1 711 aa9.62□□□□□ -0.87
SPATA9-204ENST00000477047 A0A0U1RQG5 324 aaPredicted RBP9.61□□□□□ -0.87
SPATA9-204ENST00000477047 DHX37Q8IY37 1157 aaKnown RBP9.58□□□□□ -0.88
SPATA9-204ENST00000477047 VSIG10Q8N0Z9 540 aa9.58□□□□□ -0.88
SPATA9-204ENST00000477047 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.58□□□□□ -0.88
SPATA9-204ENST00000477047 ASTLQ6HA08 431 aaPredicted RBP9.57□□□□□ -0.88
SPATA9-204ENST00000477047 CCER1Q8TC90 406 aaPredicted RBP9.57□□□□□ -0.88
SPATA9-204ENST00000477047 ARID3AQ99856 593 aa9.57□□□□□ -0.88
SPATA9-204ENST00000477047 RBM19Q9Y4C8 960 aaKnown RBP9.57□□□□□ -0.88
SPATA9-204ENST00000477047 SPDYE4A6NLX3 237 aa9.54□□□□□ -0.88
SPATA9-204ENST00000477047 HAP1P54257 671 aaPredicted RBP9.54□□□□□ -0.88
SPATA9-204ENST00000477047 ST18O60284 1047 aa9.53□□□□□ -0.88
SPATA9-204ENST00000477047 IPO4Q8TEX9 1081 aaKnown RBP9.53□□□□□ -0.88
SPATA9-204ENST00000477047 CHRM1P11229 460 aaPredicted RBP9.51□□□□□ -0.89
SPATA9-204ENST00000477047 TRIM41Q8WV44 630 aa9.51□□□□□ -0.89
SPATA9-204ENST00000477047 SHROOM4Q9ULL8 1493 aa9.51□□□□□ -0.89
SPATA9-204ENST00000477047 ATMINO43313 823 aaPredicted RBP9.5□□□□□ -0.89
SPATA9-204ENST00000477047 RRP9O43818 475 aaKnown RBP9.5□□□□□ -0.89
SPATA9-204ENST00000477047 TEX2Q8IWB9 1127 aa9.5□□□□□ -0.89
SPATA9-204ENST00000477047 NAP1L2Q9ULW6 460 aaPredicted RBP9.5□□□□□ -0.89
SPATA9-204ENST00000477047 PAXIP1Q6ZW49 1069 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms