RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 BCANQ96GW7 911 aa8.04□□□□□ -1.12
HMGB1P25-201ENST00000468402 GALR2O43603 387 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P25-201ENST00000468402 KLHL34Q8N239 644 aa8.01□□□□□ -1.13
HMGB1P25-201ENST00000468402 CREBZFQ9NS37 354 aa8.01□□□□□ -1.13
HMGB1P25-201ENST00000468402 PHF12Q96QT6 1004 aa8□□□□□ -1.13
HMGB1P25-201ENST00000468402 PKD2Q13563 968 aa7.98□□□□□ -1.13
HMGB1P25-201ENST00000468402 VSIG10Q8N0Z9 540 aa7.98□□□□□ -1.13
HMGB1P25-201ENST00000468402 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P25-201ENST00000468402 PRKCSHP14314 528 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P25-201ENST00000468402 POTEMA6NI47 508 aa7.94□□□□□ -1.14
HMGB1P25-201ENST00000468402 ECM2O94769 699 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P25-201ENST00000468402 PLEKHG5O94827 1062 aa7.93□□□□□ -1.14
HMGB1P25-201ENST00000468402 SPOCK2Q92563 424 aa7.93□□□□□ -1.14
HMGB1P25-201ENST00000468402 PAXIP1Q6ZW49 1069 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P25-201ENST00000468402 CFAP44Q96MT7 982 aa7.92□□□□□ -1.14
HMGB1P25-201ENST00000468402 TSPYL2Q9H2G4 693 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P25-201ENST00000468402 OTUD5Q96G74 571 aa7.91□□□□□ -1.14
HMGB1P25-201ENST00000468402 POTEGQ6S5H5 508 aa7.9□□□□□ -1.14
HMGB1P25-201ENST00000468402 BBXQ8WY36 941 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P25-201ENST00000468402 METRNQ9UJH8 293 aa7.9□□□□□ -1.14
HMGB1P25-201ENST00000468402 TAOK2Q9UL54 1235 aa7.9□□□□□ -1.14
HMGB1P25-201ENST00000468402 PLCD3Q8N3E9 789 aa7.89□□□□□ -1.15
HMGB1P25-201ENST00000468402 SCUBE2Q9NQ36 999 aa7.88□□□□□ -1.15
HMGB1P25-201ENST00000468402 MAMSTRQ6ZN01 415 aa7.87□□□□□ -1.15
HMGB1P25-201ENST00000468402 SLC39A7Q92504 469 aa7.87□□□□□ -1.15
HMGB1P25-201ENST00000468402 FAM163AQ96GL9 167 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P25-201ENST00000468402 MS4A3Q96HJ5 214 aa7.86□□□□□ -1.15
HMGB1P25-201ENST00000468402 C7P10643 843 aa7.84□□□□□ -1.15
HMGB1P25-201ENST00000468402 TPRNQ4KMQ1 711 aa7.84□□□□□ -1.15
HMGB1P25-201ENST00000468402 POTEB2H3BUK9 544 aa7.83□□□□□ -1.16
HMGB1P25-201ENST00000468402 MIER1Q8N108 512 aa7.83□□□□□ -1.16
HMGB1P25-201ENST00000468402 KDM2AQ9Y2K7 1162 aa7.82□□□□□ -1.16
HMGB1P25-201ENST00000468402 SEC24BO95487 1268 aa7.81□□□□□ -1.16
HMGB1P25-201ENST00000468402 PELP1Q8IZL8 1130 aaKnown RBP7.81□□□□□ -1.16
HMGB1P25-201ENST00000468402 SPRYD3Q8NCJ5 442 aa7.81□□□□□ -1.16
HMGB1P25-201ENST00000468402 CIZ1Q9ULV3 898 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P25-201ENST00000468402 RGL2O15211 777 aa7.78□□□□□ -1.16
HMGB1P25-201ENST00000468402 ATMINO43313 823 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P25-201ENST00000468402 ASTLQ6HA08 431 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P25-201ENST00000468402 CHGAP10645 457 aaKnown RBP7.76□□□□□ -1.17
HMGB1P25-201ENST00000468402 PCDH10Q9P2E7 1040 aa7.76□□□□□ -1.17
HMGB1P25-201ENST00000468402 TSHZ2Q9NRE2 1034 aa7.75□□□□□ -1.17
HMGB1P25-201ENST00000468402 ATN1P54259 1190 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P25-201ENST00000468402 MNX1P50219 401 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P25-201ENST00000468402 ZBTB47Q9UFB7 747 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P25-201ENST00000468402 NBR1Q14596 966 aa7.69□□□□□ -1.18
HMGB1P25-201ENST00000468402 MAP3K13O43283 966 aa7.67□□□□□ -1.18
HMGB1P25-201ENST00000468402 KIF12Q96FN5 646 aa7.67□□□□□ -1.18
HMGB1P25-201ENST00000468402 BMP2KQ9NSY1 1161 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P25-201ENST00000468402 CCDC61Q9Y6R9 512 aa7.67□□□□□ -1.18
HMGB1P25-201ENST00000468402 PCDHB13Q9Y5F0 798 aa7.65□□□□□ -1.18
HMGB1P25-201ENST00000468402 TIE1P35590 1138 aa7.64□□□□□ -1.19
HMGB1P25-201ENST00000468402 POTEJP0CG39 1038 aa7.63□□□□□ -1.19
HMGB1P25-201ENST00000468402 SLAIN1Q8ND83 568 aa7.63□□□□□ -1.19
HMGB1P25-201ENST00000468402 TRIM41Q8WV44 630 aa7.63□□□□□ -1.19
HMGB1P25-201ENST00000468402 PLCG2P16885 1265 aa7.62□□□□□ -1.19
HMGB1P25-201ENST00000468402 TRIM35Q9UPQ4 493 aa7.62□□□□□ -1.19
HMGB1P25-201ENST00000468402 TRPC6Q9Y210 931 aa7.62□□□□□ -1.19
HMGB1P25-201ENST00000468402 CDAN1Q8IWY9 1227 aa7.61□□□□□ -1.19
HMGB1P25-201ENST00000468402 RASEFQ8IZ41 740 aa7.61□□□□□ -1.19
HMGB1P25-201ENST00000468402 TTLL13PA6NNM8 815 aa7.6□□□□□ -1.19
HMGB1P25-201ENST00000468402 GSE1Q14687 1217 aa7.58□□□□□ -1.2
HMGB1P25-201ENST00000468402 HS6ST3Q8IZP7 471 aa7.58□□□□□ -1.2
HMGB1P25-201ENST00000468402 FAM212AQ96EL1 285 aa7.58□□□□□ -1.2
HMGB1P25-201ENST00000468402 DCAF8Q5TAQ9 597 aa7.57□□□□□ -1.2
HMGB1P25-201ENST00000468402 TMEM106CQ9BVX2 250 aa7.57□□□□□ -1.2
HMGB1P25-201ENST00000468402 COLQQ9Y215 455 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P25-201ENST00000468402 GOLGA2Q08379 1002 aa7.54□□□□□ -1.2
HMGB1P25-201ENST00000468402 IER5LQ5T953 404 aa7.53□□□□□ -1.2
HMGB1P25-201ENST00000468402 POTEFA5A3E0 1075 aa7.52□□□□□ -1.21
HMGB1P25-201ENST00000468402 RIOK3O14730 519 aaKnown RBP7.51□□□□□ -1.21
HMGB1P25-201ENST00000468402 LCE2DQ5TA82 110 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P25-201ENST00000468402 STK25O00506 426 aa7.5□□□□□ -1.21
HMGB1P25-201ENST00000468402 SNPHO15079 494 aa7.5□□□□□ -1.21
HMGB1P25-201ENST00000468402 IFNL1Q8IU54 200 aa7.5□□□□□ -1.21
HMGB1P25-201ENST00000468402 SGIP1Q9BQI5 828 aa7.5□□□□□ -1.21
HMGB1P25-201ENST00000468402 DNAJC5Q9H3Z4 198 aa7.5□□□□□ -1.21
HMGB1P25-201ENST00000468402 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.5□□□□□ -1.21
HMGB1P25-201ENST00000468402 ST18O60284 1047 aa7.49□□□□□ -1.21
HMGB1P25-201ENST00000468402 RNF25Q96BH1 459 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P25-201ENST00000468402 C3orf67Q6ZVT6 689 aa7.47□□□□□ -1.21
HMGB1P25-201ENST00000468402 PYGBP11216 843 aa7.46□□□□□ -1.22
HMGB1P25-201ENST00000468402 NKX1-1Q15270 411 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P25-201ENST00000468402 GTPBP6O43824 516 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P25-201ENST00000468402 NUBP1P53384 320 aa7.45□□□□□ -1.22
HMGB1P25-201ENST00000468402 MARVELD3Q96A59 401 aa7.45□□□□□ -1.22
HMGB1P25-201ENST00000468402 G3V3G9 751 aa7.44□□□□□ -1.22
HMGB1P25-201ENST00000468402 VGFO15240 615 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P25-201ENST00000468402 TULP1O00294 542 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P25-201ENST00000468402 MKRN3Q13064 507 aaKnown RBP7.43□□□□□ -1.22
HMGB1P25-201ENST00000468402 OCEL1Q9H607 264 aa7.43□□□□□ -1.22
HMGB1P25-201ENST00000468402 STK24Q9Y6E0 443 aa7.43□□□□□ -1.22
HMGB1P25-201ENST00000468402 EMP3P54852 163 aa7.41□□□□□ -1.22
HMGB1P25-201ENST00000468402 RYDENQ9NUL5 291 aaKnown RBP7.41□□□□□ -1.22
HMGB1P25-201ENST00000468402 GTF3C3Q9Y5Q9 886 aa7.41□□□□□ -1.22
HMGB1P25-201ENST00000468402 TMEM121BQ9BXQ6 578 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P25-201ENST00000468402 BCL11BQ9C0K0 894 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P25-201ENST00000468402 PCDHB8Q9UN66 801 aa7.39□□□□□ -1.23
HMGB1P25-201ENST00000468402 MMRN1Q13201 1228 aa7.38□□□□□ -1.23
HMGB1P25-201ENST00000468402 TIMELESSQ9UNS1 1208 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms