RNA–Protein interactions for RNA: ENST00000467173.1

USP9X-206, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-206ENST00000467173 MS4A3Q96HJ5 214 aa14.89□□□□□ -0.03
USP9X-206ENST00000467173 RASEFQ8IZ41 740 aa14.83□□□□□ -0.04
USP9X-206ENST00000467173 ASTLQ6HA08 431 aaPredicted RBP14.82□□□□□ -0.04
USP9X-206ENST00000467173 KIF12Q96FN5 646 aa14.82□□□□□ -0.04
USP9X-206ENST00000467173 FBXO3Q9UK99 471 aa14.81□□□□□ -0.04
USP9X-206ENST00000467173 PLSCR2Q9NRY7 297 aa14.78□□□□□ -0.04
USP9X-206ENST00000467173 ATMINO43313 823 aaPredicted RBP14.77□□□□□ -0.05
USP9X-206ENST00000467173 PELP1Q8IZL8 1130 aaKnown RBP14.76□□□□□ -0.05
USP9X-206ENST00000467173 SLC39A7Q92504 469 aa14.75□□□□□ -0.05
USP9X-206ENST00000467173 C7P10643 843 aa14.73□□□□□ -0.05
USP9X-206ENST00000467173 MAP3K13O43283 966 aa14.72□□□□□ -0.05
USP9X-206ENST00000467173 NUBP1P53384 320 aa14.72□□□□□ -0.05
USP9X-206ENST00000467173 FAM212AQ96EL1 285 aa14.7□□□□□ -0.06
USP9X-206ENST00000467173 METRNQ9UJH8 293 aa14.7□□□□□ -0.06
USP9X-206ENST00000467173 SGIP1Q9BQI5 828 aa14.69□□□□□ -0.06
USP9X-206ENST00000467173 TIE1P35590 1138 aa14.67□□□□□ -0.06
USP9X-206ENST00000467173 ATN1P54259 1190 aaPredicted RBP14.65□□□□□ -0.06
USP9X-206ENST00000467173 POTEB2H3BUK9 544 aa14.64□□□□□ -0.07
USP9X-206ENST00000467173 BMP2KQ9NSY1 1161 aaPredicted RBP14.64□□□□□ -0.07
USP9X-206ENST00000467173 OTUD5Q96G74 571 aa14.63□□□□□ -0.07
USP9X-206ENST00000467173 PCDHB13Q9Y5F0 798 aa14.62□□□□□ -0.07
USP9X-206ENST00000467173 TRPC6Q9Y210 931 aa14.59□□□□□ -0.07
USP9X-206ENST00000467173 MAMSTRQ6ZN01 415 aa14.56□□□□□ -0.08
USP9X-206ENST00000467173 TTLL13PA6NNM8 815 aa14.54□□□□□ -0.08
USP9X-206ENST00000467173 VASPP50552 380 aaPredicted RBP14.54□□□□□ -0.08
USP9X-206ENST00000467173 DCAF8Q5TAQ9 597 aa14.53□□□□□ -0.08
USP9X-206ENST00000467173 IFNL1Q8IU54 200 aa14.5□□□□□ -0.09
USP9X-206ENST00000467173 KLHL34Q8N239 644 aa14.5□□□□□ -0.09
USP9X-206ENST00000467173 IER5LQ5T953 404 aa14.47□□□□□ -0.09
USP9X-206ENST00000467173 SCUBE2Q9NQ36 999 aa14.46□□□□□ -0.09
USP9X-206ENST00000467173 SEC24BO95487 1268 aa14.45□□□□□ -0.1
USP9X-206ENST00000467173 POTEJP0CG39 1038 aa14.45□□□□□ -0.1
USP9X-206ENST00000467173 TRIM35Q9UPQ4 493 aa14.45□□□□□ -0.1
USP9X-206ENST00000467173 GSE1Q14687 1217 aa14.43□□□□□ -0.1
USP9X-206ENST00000467173 TMEM106CQ9BVX2 250 aa14.42□□□□□ -0.1
USP9X-206ENST00000467173 POTEFA5A3E0 1075 aa14.41□□□□□ -0.1
USP9X-206ENST00000467173 PYGBP11216 843 aa14.41□□□□□ -0.1
USP9X-206ENST00000467173 COLQQ9Y215 455 aaPredicted RBP14.36□□□□□ -0.11
USP9X-206ENST00000467173 ZNF467Q7Z7K2 595 aaPredicted RBP14.3□□□□□ -0.12
USP9X-206ENST00000467173 PCDHB8Q9UN66 801 aa14.3□□□□□ -0.12
USP9X-206ENST00000467173 CHRM1P11229 460 aaPredicted RBP14.29□□□□□ -0.12
USP9X-206ENST00000467173 PLCG2P16885 1265 aa14.29□□□□□ -0.12
USP9X-206ENST00000467173 SPOCK2Q92563 424 aa14.27□□□□□ -0.13
USP9X-206ENST00000467173 POTEMA6NI47 508 aa14.24□□□□□ -0.13
USP9X-206ENST00000467173 IFNLR1Q8IU57 520 aaPredicted RBP14.24□□□□□ -0.13
USP9X-206ENST00000467173 IRX5P78411 483 aaPredicted RBP14.23□□□□□ -0.13
USP9X-206ENST00000467173 POTEGQ6S5H5 508 aa14.21□□□□□ -0.13
USP9X-206ENST00000467173 OCEL1Q9H607 264 aa14.21□□□□□ -0.13
USP9X-206ENST00000467173 FAM163AQ96GL9 167 aaPredicted RBP14.17□□□□□ -0.14
USP9X-206ENST00000467173 GOLGA2Q08379 1002 aa14.16□□□□□ -0.14
USP9X-206ENST00000467173 CIZ1Q9ULV3 898 aaPredicted RBP14.16□□□□□ -0.14
USP9X-206ENST00000467173 PSEN1P49768 467 aa14.12□□□□□ -0.15
USP9X-206ENST00000467173 MKRN3Q13064 507 aaKnown RBP14.12□□□□□ -0.15
USP9X-206ENST00000467173 PCDH10Q9P2E7 1040 aa14.12□□□□□ -0.15
USP9X-206ENST00000467173 SLAIN1Q8ND83 568 aa14.11□□□□□ -0.15
USP9X-206ENST00000467173 PDAP1Q13442 181 aaKnown RBP14.1□□□□□ -0.15
USP9X-206ENST00000467173 LCE2DQ5TA82 110 aaPredicted RBP14.07□□□□□ -0.16
USP9X-206ENST00000467173 TRIM41Q8WV44 630 aa14.07□□□□□ -0.16
USP9X-206ENST00000467173 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.04□□□□□ -0.16
USP9X-206ENST00000467173 PDCD7Q8N8D1 485 aaKnown RBP14.02□□□□□ -0.17
USP9X-206ENST00000467173 L3MBTL3Q96JM7 780 aaPredicted RBP14.02□□□□□ -0.17
USP9X-206ENST00000467173 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.01□□□□□ -0.171e-10■■■□□ 17.1
USP9X-206ENST00000467173 SNPHO15079 494 aa13.96□□□□□ -0.17
USP9X-206ENST00000467173 C3orf67Q6ZVT6 689 aa13.95□□□□□ -0.18
USP9X-206ENST00000467173 ILDR1Q86SU0 546 aaPredicted RBP13.93□□□□□ -0.18
USP9X-206ENST00000467173 CABP2Q9NPB3 220 aa13.93□□□□□ -0.18
USP9X-206ENST00000467173 ST18O60284 1047 aa13.9□□□□□ -0.18
USP9X-206ENST00000467173 TMEM121BQ9BXQ6 578 aaPredicted RBP13.87□□□□□ -0.19
USP9X-206ENST00000467173 G3V3G9 751 aa13.86□□□□□ -0.19
USP9X-206ENST00000467173 RIOK3O14730 519 aaKnown RBP13.81□□□□□ -0.2
USP9X-206ENST00000467173 CDAN1Q8IWY9 1227 aa13.8□□□□□ -0.2
USP9X-206ENST00000467173 BOLA1Q9Y3E2 137 aa13.8□□□□□ -0.2
USP9X-206ENST00000467173 DPY19L2Q6NUT2 758 aa13.79□□□□□ -0.2
USP9X-206ENST00000467173 VGFO15240 615 aaPredicted RBP13.76□□□□□ -0.21
USP9X-206ENST00000467173 EFCAB3Q8N7B9 438 aa13.76□□□□□ -0.21
USP9X-206ENST00000467173 RNF25Q96BH1 459 aaPredicted RBP13.72□□□□□ -0.21
USP9X-206ENST00000467173 TAOK2Q9UL54 1235 aa13.72□□□□□ -0.21
USP9X-206ENST00000467173 SOX12O15370 315 aa13.71□□□□□ -0.21
USP9X-206ENST00000467173 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.69□□□□□ -0.22
USP9X-206ENST00000467173 ZFP91Q96JP5 570 aaPredicted RBP13.69□□□□□ -0.22
USP9X-206ENST00000467173 MARVELD3Q96A59 401 aa13.66□□□□□ -0.22
USP9X-206ENST00000467173 EMP3P54852 163 aa13.63□□□□□ -0.23
USP9X-206ENST00000467173 MICALL2Q8IY33 904 aa13.58□□□□□ -0.24
USP9X-206ENST00000467173 DOK7Q18PE1 504 aa13.57□□□□□ -0.24
USP9X-206ENST00000467173 ECM2O94769 699 aaPredicted RBP13.56□□□□□ -0.24
USP9X-206ENST00000467173 ZNF710Q8N1W2 664 aa13.56□□□□□ -0.24
USP9X-206ENST00000467173 PHF8Q9UPP1 1060 aa13.56□□□□□ -0.24
USP9X-206ENST00000467173 HOXB3P14651 431 aaPredicted RBP13.55□□□□□ -0.24
USP9X-206ENST00000467173 NLRP6P59044 892 aa13.55□□□□□ -0.24
USP9X-206ENST00000467173 BCL11BQ9C0K0 894 aaPredicted RBP13.55□□□□□ -0.24
USP9X-206ENST00000467173 MS4A4AQ96JQ5 239 aa13.54□□□□□ -0.24
USP9X-206ENST00000467173 RIMBP2O15034 1052 aa13.52□□□□□ -0.25
USP9X-206ENST00000467173 STK24Q9Y6E0 443 aa13.52□□□□□ -0.25
USP9X-206ENST00000467173 FAM205CA6NFA0 338 aa13.5□□□□□ -0.25
USP9X-206ENST00000467173 HOXB1P14653 301 aaPredicted RBP13.5□□□□□ -0.25
USP9X-206ENST00000467173 HS3ST6Q96QI5 342 aa13.5□□□□□ -0.25
USP9X-206ENST00000467173 STK25O00506 426 aa13.49□□□□□ -0.25
USP9X-206ENST00000467173 SPNS2Q8IVW8 549 aa13.45□□□□□ -0.26
USP9X-206ENST00000467173 FBXO22Q8NEZ5 403 aa13.45□□□□□ -0.26
USP9X-206ENST00000467173 ZSWIM6Q9HCJ5 1215 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms