RNA–Protein interactions for RNA: ENST00000451903.2

CPS1-204, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 4,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-204ENST00000451903 FGD1P98174 961 aa8.62□□□□□ -1.03
CPS1-204ENST00000451903 LAS1LQ9Y4W2 734 aaKnown RBP8.62□□□□□ -1.03
CPS1-204ENST00000451903 RBM10P98175 930 aaKnown RBP8.61□□□□□ -1.03
CPS1-204ENST00000451903 TSHZ2Q9NRE2 1034 aa8.61□□□□□ -1.03
CPS1-204ENST00000451903 NOP58Q9Y2X3 529 aaKnown RBP8.61□□□□□ -1.03
CPS1-204ENST00000451903 FKBP8Q14318 412 aa8.61□□□□□ -1.03
CPS1-204ENST00000451903 CHMP4AQ9BY43 222 aa8.61□□□□□ -1.03
CPS1-204ENST00000451903 PNNQ9H307 717 aaKnown RBP8.6□□□□□ -1.03
CPS1-204ENST00000451903 CALRP27797 417 aaKnown RBP8.59□□□□□ -1.03
CPS1-204ENST00000451903 TNNT3P45378 269 aaPredicted RBP8.59□□□□□ -1.03
CPS1-204ENST00000451903 BCCIPQ9P287 314 aaKnown RBP eCLIP8.59□□□□□ -1.03
CPS1-204ENST00000451903 ZNF526Q8TF50 670 aaPredicted RBP8.58□□□□□ -1.04
CPS1-204ENST00000451903 RBM19Q9Y4C8 960 aaKnown RBP8.58□□□□□ -1.04
CPS1-204ENST00000451903 DHX37Q8IY37 1157 aaKnown RBP8.57□□□□□ -1.04
CPS1-204ENST00000451903 RRP9O43818 475 aaKnown RBP8.55□□□□□ -1.04
CPS1-204ENST00000451903 BBXQ8WY36 941 aaPredicted RBP8.55□□□□□ -1.04
CPS1-204ENST00000451903 SUPT16HQ9Y5B9 1047 aaKnown RBP8.54□□□□□ -1.04
CPS1-204ENST00000451903 PSMD1Q99460 953 aa8.53□□□□□ -1.04
CPS1-204ENST00000451903 NAP1L2Q9ULW6 460 aaPredicted RBP8.53□□□□□ -1.04
CPS1-204ENST00000451903 L1TD1Q5T7N2 865 aaKnown RBP8.51□□□□□ -1.05
CPS1-204ENST00000451903 PLCD4Q9BRC7 762 aa8.5□□□□□ -1.05
CPS1-204ENST00000451903 CLSTN1O94985 981 aa8.49□□□□□ -1.05
CPS1-204ENST00000451903 TAF3Q5VWG9 929 aa8.48□□□□□ -1.05
CPS1-204ENST00000451903 DDRGK1Q96HY6 314 aa8.48□□□□□ -1.05
CPS1-204ENST00000451903 MAP7D2Q96T17 732 aa8.48□□□□□ -1.05
CPS1-204ENST00000451903 USP35Q9P2H5 1018 aa8.48□□□□□ -1.05
CPS1-204ENST00000451903 WWC1Q8IX03 1113 aa8.47□□□□□ -1.05
CPS1-204ENST00000451903 AAMPQ13685 434 aa8.45□□□□□ -1.06
CPS1-204ENST00000451903 CLGNO14967 610 aa8.45□□□□□ -1.06
CPS1-204ENST00000451903 SHROOM4Q9ULL8 1493 aa8.45□□□□□ -1.06
CPS1-204ENST00000451903 FANCIQ9NVI1 1328 aa8.44□□□□□ -1.06
CPS1-204ENST00000451903 CC2D1BQ5T0F9 858 aaKnown RBP8.44□□□□□ -1.06
CPS1-204ENST00000451903 IRX3P78415 501 aaPredicted RBP8.43□□□□□ -1.06
CPS1-204ENST00000451903 MTERF4Q7Z6M4 381 aaKnown RBP8.42□□□□□ -1.06
CPS1-204ENST00000451903 AXDND1Q5T1B0 1012 aaPredicted RBP8.42□□□□□ -1.06
CPS1-204ENST00000451903 ARID3AQ99856 593 aa8.42□□□□□ -1.06
CPS1-204ENST00000451903 OS9Q13438 667 aaPredicted RBP8.41□□□□□ -1.06
CPS1-204ENST00000451903 FTSJ3Q8IY81 847 aaKnown RBP8.4□□□□□ -1.06
CPS1-204ENST00000451903 FAM193AP78312 1265 aa8.4□□□□□ -1.07
CPS1-204ENST00000451903 IPO4Q8TEX9 1081 aaKnown RBP8.4□□□□□ -1.07
CPS1-204ENST00000451903 GOLGA6L3A6NEY3 463 aa8.39□□□□□ -1.07
CPS1-204ENST00000451903 ZBTB7CA1YPR0 619 aa8.39□□□□□ -1.07
CPS1-204ENST00000451903 FAM43AQ8N2R8 423 aa8.39□□□□□ -1.07
CPS1-204ENST00000451903 IL27Q8NEV9 243 aa8.38□□□□□ -1.07
CPS1-204ENST00000451903 IRX6P78412 446 aaPredicted RBP8.37□□□□□ -1.07
CPS1-204ENST00000451903 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.37□□□□□ -1.07
CPS1-204ENST00000451903 CHMP4BQ9H444 224 aaKnown RBP8.37□□□□□ -1.07
CPS1-204ENST00000451903 TPM2P07951 284 aa8.36□□□□□ -1.07
CPS1-204ENST00000451903 SSR1P43307 286 aaKnown RBP8.36□□□□□ -1.07
CPS1-204ENST00000451903 GOLGA6L6A8MZA4 724 aa8.35□□□□□ -1.07
CPS1-204ENST00000451903 GOLGA6L22H0YM25 854 aa8.35□□□□□ -1.07
CPS1-204ENST00000451903 ITGAEP38570 1179 aa8.35□□□□□ -1.07
CPS1-204ENST00000451903 CFAP44Q96MT7 982 aa8.35□□□□□ -1.07
CPS1-204ENST00000451903 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.35□□□□□ -1.07
CPS1-204ENST00000451903 MSNP26038 577 aaKnown RBP8.34□□□□□ -1.07
CPS1-204ENST00000451903 CCDC66A2RUB6 948 aa8.32□□□□□ -1.08
CPS1-204ENST00000451903 ATP1B4Q9UN42 357 aaPredicted RBP8.32□□□□□ -1.08
CPS1-204ENST00000451903 KCNA4P22459 653 aa8.32□□□□□ -1.08
CPS1-204ENST00000451903 CNKSR2Q8WXI2 1034 aa8.32□□□□□ -1.08
CPS1-204ENST00000451903 GSE1Q14687 1217 aa8.31□□□□□ -1.08
CPS1-204ENST00000451903 ZNF622Q969S3 477 aaKnown RBP eCLIP8.31□□□□□ -1.08
CPS1-204ENST00000451903 GOLGA6L1Q8N7Z2 621 aa8.31□□□□□ -1.08
CPS1-204ENST00000451903 TSPYL1Q9H0U9 437 aa8.31□□□□□ -1.08
CPS1-204ENST00000451903 ZNF771Q7L3S4 317 aaPredicted RBP8.3□□□□□ -1.08
CPS1-204ENST00000451903 CNPY4Q8N129 248 aa8.3□□□□□ -1.08
CPS1-204ENST00000451903 RSPH4AQ5TD94 716 aa8.3□□□□□ -1.08
CPS1-204ENST00000451903 UPF2Q9HAU5 1272 aaKnown RBP8.29□□□□□ -1.08
CPS1-204ENST00000451903 MIER1Q8N108 512 aa8.29□□□□□ -1.08
CPS1-204ENST00000451903 ANP32CO43423 234 aa8.29□□□□□ -1.08
CPS1-204ENST00000451903 DCAF1Q9Y4B6 1507 aa8.28□□□□□ -1.08
CPS1-204ENST00000451903 PDCL3Q9H2J4 239 aa8.28□□□□□ -1.08
CPS1-204ENST00000451903 TICAM2Q86XR7 235 aa8.28□□□□□ -1.08
CPS1-204ENST00000451903 ZNF592Q92610 1267 aa8.28□□□□□ -1.08
CPS1-204ENST00000451903 CALD1Q05682 793 aaKnown RBP8.27□□□□□ -1.08
CPS1-204ENST00000451903 SETQ01105 290 aaPredicted RBP8.27□□□□□ -1.09
CPS1-204ENST00000451903 CHAF1AQ13111 956 aaPredicted RBP8.27□□□□□ -1.09
CPS1-204ENST00000451903 IPO9Q96P70 1041 aaKnown RBP8.27□□□□□ -1.09
CPS1-204ENST00000451903 NEFHP12036 1026 aa8.26□□□□□ -1.09
CPS1-204ENST00000451903 BECN1Q14457 450 aa8.26□□□□□ -1.09
CPS1-204ENST00000451903 TEX2Q8IWB9 1127 aa8.26□□□□□ -1.09
CPS1-204ENST00000451903 PLCD3Q8N3E9 789 aa8.26□□□□□ -1.09
CPS1-204ENST00000451903 PRDM10Q9NQV6 1147 aa8.26□□□□□ -1.09
CPS1-204ENST00000451903 AEBP1Q8IUX7 1158 aa8.25□□□□□ -1.09
CPS1-204ENST00000451903 PAIP2Q9BPZ3 127 aaKnown RBP8.25□□□□□ -1.09
CPS1-204ENST00000451903 ZFP91Q96JP5 570 aaPredicted RBP8.25□□□□□ -1.09
CPS1-204ENST00000451903 GPATCH11Q8N954 259 aa8.24□□□□□ -1.09
CPS1-204ENST00000451903 MCCP23508 829 aa8.24□□□□□ -1.09
CPS1-204ENST00000451903 RBM28Q9NW13 759 aaKnown RBP8.23□□□□□ -1.09
CPS1-204ENST00000451903 PPP4R2Q9NY27 417 aa8.23□□□□□ -1.09
CPS1-204ENST00000451903 HDAC5Q9UQL6 1122 aa8.23□□□□□ -1.09
CPS1-204ENST00000451903 MAPK8IP2Q13387 824 aaPredicted RBP8.23□□□□□ -1.09
CPS1-204ENST00000451903 STK11IPQ8N1F8 1099 aa8.23□□□□□ -1.09
CPS1-204ENST00000451903 DNAJC2Q99543 621 aaKnown RBP8.22□□□□□ -1.09
CPS1-204ENST00000451903 TMEM132AQ24JP5 1023 aa8.22□□□□□ -1.09
CPS1-204ENST00000451903 FAM13BQ9NYF5 915 aa8.22□□□□□ -1.09
CPS1-204ENST00000451903 SAMD1Q6SPF0 538 aaPredicted RBP8.21□□□□□ -1.09
CPS1-204ENST00000451903 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.21□□□□□ -1.09
CPS1-204ENST00000451903 NOM1Q5C9Z4 860 aaKnown RBP8.21□□□□□ -1.1
CPS1-204ENST00000451903 AEBP2Q6ZN18 517 aaPredicted RBP8.19□□□□□ -1.1
CPS1-204ENST00000451903 RGS3P49796 1198 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms