RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 CREBZFQ9NS37 354 aa6.7□□□□□ -1.34
R3HDM1-209ENST00000441871 EIF5BO60841 1220 aaKnown RBP6.69□□□□□ -1.34
R3HDM1-209ENST00000441871 PLCB2Q00722 1185 aa6.69□□□□□ -1.34
R3HDM1-209ENST00000441871 KLHL34Q8N239 644 aa6.69□□□□□ -1.34
R3HDM1-209ENST00000441871 PODXL2Q9NZ53 605 aa6.69□□□□□ -1.34
R3HDM1-209ENST00000441871 PAK3O75914 559 aaPredicted RBP6.68□□□□□ -1.34
R3HDM1-209ENST00000441871 CD44P16070 742 aaKnown RBP6.66□□□□□ -1.34
R3HDM1-209ENST00000441871 SP7Q8TDD2 431 aaPredicted RBP6.66□□□□□ -1.34
R3HDM1-209ENST00000441871 ZBTB47Q9UFB7 747 aaPredicted RBP6.66□□□□□ -1.34
R3HDM1-209ENST00000441871 C19orf67A6NJJ6 358 aa6.64□□□□□ -1.35
R3HDM1-209ENST00000441871 HAP1P54257 671 aaPredicted RBP6.64□□□□□ -1.35
R3HDM1-209ENST00000441871 ZRANB1Q9UGI0 708 aa6.6□□□□□ -1.35
R3HDM1-209ENST00000441871 NPM2Q86SE8 214 aaKnown RBP6.58□□□□□ -1.36
R3HDM1-209ENST00000441871 EVX2Q03828 476 aa6.57□□□□□ -1.36
R3HDM1-209ENST00000441871 VASPP50552 380 aaPredicted RBP6.56□□□□□ -1.36
R3HDM1-209ENST00000441871 CLCN6P51797 869 aa6.56□□□□□ -1.36
R3HDM1-209ENST00000441871 TSPYL2Q9H2G4 693 aaPredicted RBP6.55□□□□□ -1.36
R3HDM1-209ENST00000441871 MNX1P50219 401 aaPredicted RBP6.54□□□□□ -1.36
R3HDM1-209ENST00000441871 TMEM132AQ24JP5 1023 aa6.54□□□□□ -1.36
R3HDM1-209ENST00000441871 VSIG10Q8N0Z9 540 aa6.53□□□□□ -1.36
R3HDM1-209ENST00000441871 ZNF579Q8NAF0 562 aaKnown RBP6.52□□□□□ -1.37
R3HDM1-209ENST00000441871 GABBR2O75899 941 aa6.51□□□□□ -1.37
R3HDM1-209ENST00000441871 FAM212AQ96EL1 285 aa6.51□□□□□ -1.37
R3HDM1-209ENST00000441871 C14orf37Q86TY3 774 aa6.5□□□□□ -1.37
R3HDM1-209ENST00000441871 DCAF8Q5TAQ9 597 aa6.48□□□□□ -1.37
R3HDM1-209ENST00000441871 DCBLD2Q96PD2 775 aa6.48□□□□□ -1.37
R3HDM1-209ENST00000441871 PHF12Q96QT6 1004 aa6.48□□□□□ -1.37
R3HDM1-209ENST00000441871 RASEFQ8IZ41 740 aa6.47□□□□□ -1.37
R3HDM1-209ENST00000441871 NUBP1P53384 320 aa6.44□□□□□ -1.38
R3HDM1-209ENST00000441871 GSE1Q14687 1217 aa6.44□□□□□ -1.38
R3HDM1-209ENST00000441871 SPOCK2Q92563 424 aa6.44□□□□□ -1.38
R3HDM1-209ENST00000441871 CCDC61Q9Y6R9 512 aa6.44□□□□□ -1.38
R3HDM1-209ENST00000441871 GALR2O43603 387 aaPredicted RBP6.41□□□□□ -1.38
R3HDM1-209ENST00000441871 CIZ1Q9ULV3 898 aaPredicted RBP6.41□□□□□ -1.38
R3HDM1-209ENST00000441871 IFNLR1Q8IU57 520 aaPredicted RBP6.4□□□□□ -1.38
R3HDM1-209ENST00000441871 MS4A3Q96HJ5 214 aa6.4□□□□□ -1.38
R3HDM1-209ENST00000441871 TRIM26Q12899 539 aaPredicted RBP6.39□□□□□ -1.39
R3HDM1-209ENST00000441871 KIF12Q96FN5 646 aa6.39□□□□□ -1.39
R3HDM1-209ENST00000441871 PCDHB13Q9Y5F0 798 aa6.39□□□□□ -1.39
R3HDM1-209ENST00000441871 MAP3K13O43283 966 aa6.38□□□□□ -1.39
R3HDM1-209ENST00000441871 DCAF8L2P0C7V8 631 aa6.38□□□□□ -1.39
R3HDM1-209ENST00000441871 PYGBP11216 843 aa6.37□□□□□ -1.39
R3HDM1-209ENST00000441871 SGIP1Q9BQI5 828 aa6.37□□□□□ -1.39
R3HDM1-209ENST00000441871 KDM2AQ9Y2K7 1162 aa6.36□□□□□ -1.39
R3HDM1-209ENST00000441871 SUPT5HO00267 1087 aaKnown RBP6.35□□□□□ -1.39
R3HDM1-209ENST00000441871 ZNF467Q7Z7K2 595 aaPredicted RBP6.32□□□□□ -1.4
R3HDM1-209ENST00000441871 TRIM41Q8WV44 630 aa6.32□□□□□ -1.4
R3HDM1-209ENST00000441871 TIE1P35590 1138 aa6.31□□□□□ -1.4
R3HDM1-209ENST00000441871 LOC105371045A0A1W2PR82 267 aa6.3□□□□□ -1.4
R3HDM1-209ENST00000441871 POTEIP0CG38 1075 aa6.3□□□□□ -1.4
R3HDM1-209ENST00000441871 HRCP23327 699 aa6.3□□□□□ -1.4
R3HDM1-209ENST00000441871 IFNL1Q8IU54 200 aa6.3□□□□□ -1.4
R3HDM1-209ENST00000441871 SLC39A7Q92504 469 aa6.3□□□□□ -1.4
R3HDM1-209ENST00000441871 ATMINO43313 823 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-209ENST00000441871 CHRM1P11229 460 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-209ENST00000441871 ASTLQ6HA08 431 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-209ENST00000441871 UBTFP17480 764 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-209ENST00000441871 GOLGA2Q08379 1002 aa6.28□□□□□ -1.4
R3HDM1-209ENST00000441871 TMEM106CQ9BVX2 250 aa6.28□□□□□ -1.4
R3HDM1-209ENST00000441871 C7P10643 843 aa6.27□□□□□ -1.41
R3HDM1-209ENST00000441871 BMP2KQ9NSY1 1161 aaPredicted RBP6.27□□□□□ -1.41
R3HDM1-209ENST00000441871 PCDHB8Q9UN66 801 aa6.27□□□□□ -1.41
R3HDM1-209ENST00000441871 TTLL13PA6NNM8 815 aa6.26□□□□□ -1.41
R3HDM1-209ENST00000441871 SEC24BO95487 1268 aa6.26□□□□□ -1.41
R3HDM1-209ENST00000441871 ATN1P54259 1190 aaPredicted RBP6.26□□□□□ -1.41
R3HDM1-209ENST00000441871 LHX8Q68G74 356 aa6.26□□□□□ -1.41
R3HDM1-209ENST00000441871 METRNQ9UJH8 293 aa6.26□□□□□ -1.41
R3HDM1-209ENST00000441871 TRIM35Q9UPQ4 493 aa6.25□□□□□ -1.41
R3HDM1-209ENST00000441871 TRPC6Q9Y210 931 aa6.25□□□□□ -1.41
R3HDM1-209ENST00000441871 SHROOM4Q9ULL8 1493 aa6.23□□□□□ -1.41
R3HDM1-209ENST00000441871 PSEN1P49768 467 aa6.23□□□□□ -1.41
R3HDM1-209ENST00000441871 PDAP1Q13442 181 aaKnown RBP6.23□□□□□ -1.41
R3HDM1-209ENST00000441871 MKRN3Q13064 507 aaKnown RBP6.22□□□□□ -1.41
R3HDM1-209ENST00000441871 ECM2O94769 699 aaPredicted RBP6.21□□□□□ -1.42
R3HDM1-209ENST00000441871 PLCG2P16885 1265 aa6.21□□□□□ -1.42
R3HDM1-209ENST00000441871 IER5LQ5T953 404 aa6.21□□□□□ -1.42
R3HDM1-209ENST00000441871 PDIA4P13667 645 aaKnown RBP6.2□□□□□ -1.42
R3HDM1-209ENST00000441871 RIOK3O14730 519 aaKnown RBP6.19□□□□□ -1.42
R3HDM1-209ENST00000441871 CDK11BP21127 795 aaKnown RBP6.18□□□□□ -1.42
R3HDM1-209ENST00000441871 MAMSTRQ6ZN01 415 aa6.18□□□□□ -1.42
R3HDM1-209ENST00000441871 BCL11AQ9H165 835 aa6.18□□□□□ -1.42
R3HDM1-209ENST00000441871 CDK11AQ9UQ88 783 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-209ENST00000441871 VGFO15240 615 aaPredicted RBP6.17□□□□□ -1.42
R3HDM1-209ENST00000441871 HMGB1P09429 215 aaKnown RBP6.17□□□□□ -1.42
R3HDM1-209ENST00000441871 SCUBE2Q9NQ36 999 aa6.17□□□□□ -1.42
R3HDM1-209ENST00000441871 NBR1Q14596 966 aa6.16□□□□□ -1.42
R3HDM1-209ENST00000441871 CABP2Q9NPB3 220 aa6.16□□□□□ -1.42
R3HDM1-209ENST00000441871 G3V3G9 751 aa6.15□□□□□ -1.42
R3HDM1-209ENST00000441871 CHMP4AQ9BY43 222 aa6.15□□□□□ -1.42
R3HDM1-209ENST00000441871 OCEL1Q9H607 264 aa6.15□□□□□ -1.42
R3HDM1-209ENST00000441871 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.14□□□□□ -1.433e-6■■■□□ 15.8
R3HDM1-209ENST00000441871 UBE2Q2Q8WVN8 375 aa6.13□□□□□ -1.43
R3HDM1-209ENST00000441871 COLQQ9Y215 455 aaPredicted RBP6.12□□□□□ -1.43
R3HDM1-209ENST00000441871 CCDC9Q9Y3X0 531 aaKnown RBP6.12□□□□□ -1.43
R3HDM1-209ENST00000441871 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.11□□□□□ -1.43
R3HDM1-209ENST00000441871 PKD2Q13563 968 aa6.11□□□□□ -1.43
R3HDM1-209ENST00000441871 ZFP91Q96JP5 570 aaPredicted RBP6.11□□□□□ -1.43
R3HDM1-209ENST00000441871 POTEB2H3BUK9 544 aa6.1□□□□□ -1.43
R3HDM1-209ENST00000441871 STK25O00506 426 aa6.1□□□□□ -1.43
R3HDM1-209ENST00000441871 HSP90B1P14625 803 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms