RNA–Protein interactions for RNA: ENST00000394689.2

BRD7-202, Transcript of bromodomain containing 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene BRD7, Length 2,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD7-202ENST00000394689 CACNB1Q02641 598 aaPredicted RBP11.77□□□□□ -0.52
BRD7-202ENST00000394689 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.52
BRD7-202ENST00000394689 RBM19Q9Y4C8 960 aaKnown RBP11.75□□□□□ -0.53
BRD7-202ENST00000394689 KCNA4P22459 653 aa11.73□□□□□ -0.53
BRD7-202ENST00000394689 NAP1L2Q9ULW6 460 aaPredicted RBP11.68□□□□□ -0.54
BRD7-202ENST00000394689 IL27Q8NEV9 243 aa11.67□□□□□ -0.54
BRD7-202ENST00000394689 C11orf95C9JLR9 678 aaPredicted RBP11.64□□□□□ -0.55
BRD7-202ENST00000394689 IPO4Q8TEX9 1081 aaKnown RBP11.64□□□□□ -0.55
BRD7-202ENST00000394689 CCER1Q8TC90 406 aaPredicted RBP11.63□□□□□ -0.55
BRD7-202ENST00000394689 YTHDC1Q96MU7 727 aaKnown RBP11.63□□□□□ -0.55
BRD7-202ENST00000394689 SHROOM4Q9ULL8 1493 aa11.59□□□□□ -0.55
BRD7-202ENST00000394689 TEX2Q8IWB9 1127 aa11.58□□□□□ -0.56
BRD7-202ENST00000394689 HMGB1P09429 215 aaKnown RBP11.57□□□□□ -0.56
BRD7-202ENST00000394689 TRIM41Q8WV44 630 aa11.57□□□□□ -0.56
BRD7-202ENST00000394689 CHRM1P11229 460 aaPredicted RBP11.57□□□□□ -0.56
BRD7-202ENST00000394689 RRP9O43818 475 aaKnown RBP11.56□□□□□ -0.56
BRD7-202ENST00000394689 TMEM132AQ24JP5 1023 aa11.55□□□□□ -0.56
BRD7-202ENST00000394689 DCAF8L1A6NGE4 600 aa11.54□□□□□ -0.56
BRD7-202ENST00000394689 ZCCHC6Q5VYS8 1495 aaKnown RBP11.5□□□□□ -0.57
BRD7-202ENST00000394689 BBXQ8WY36 941 aaPredicted RBP11.5□□□□□ -0.57
BRD7-202ENST00000394689 ZFP91Q96JP5 570 aaPredicted RBP11.5□□□□□ -0.57
BRD7-202ENST00000394689 HOXD11P31277 338 aaPredicted RBP11.48□□□□□ -0.57
BRD7-202ENST00000394689 FTSJ3Q8IY81 847 aaKnown RBP11.48□□□□□ -0.57
BRD7-202ENST00000394689 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.48□□□□□ -0.57
BRD7-202ENST00000394689 CHMP4BQ9H444 224 aaKnown RBP11.47□□□□□ -0.57
BRD7-202ENST00000394689 SUPT5HO00267 1087 aaKnown RBP11.45□□□□□ -0.58
BRD7-202ENST00000394689 NCLP19338 710 aaKnown RBP11.45□□□□□ -0.58
BRD7-202ENST00000394689 CANXP27824 592 aaKnown RBP11.45□□□□□ -0.58
BRD7-202ENST00000394689 RNF39Q9H2S5 420 aa11.45□□□□□ -0.58
BRD7-202ENST00000394689 GTF2E1P29083 439 aaPredicted RBP11.45□□□□□ -0.58
BRD7-202ENST00000394689 RTL5Q5HYW3 569 aaPredicted RBP11.45□□□□□ -0.58
BRD7-202ENST00000394689 CALD1Q05682 793 aaKnown RBP11.44□□□□□ -0.58
BRD7-202ENST00000394689 HSP90AA2PQ14568 343 aaPredicted RBP11.44□□□□□ -0.58
BRD7-202ENST00000394689 ARID4BQ4LE39 1312 aaPredicted RBP11.44□□□□□ -0.58
BRD7-202ENST00000394689 CCDC9Q9Y3X0 531 aaKnown RBP11.44□□□□□ -0.58
BRD7-202ENST00000394689 CNGB1Q14028 1251 aaPredicted RBP11.43□□□□□ -0.58
BRD7-202ENST00000394689 ARID3AQ99856 593 aa11.43□□□□□ -0.58
BRD7-202ENST00000394689 PPP4R3CPQ6ZMV5 832 aa11.42□□□□□ -0.58
BRD7-202ENST00000394689 POLR3GLQ9BT43 218 aa11.42□□□□□ -0.58
BRD7-202ENST00000394689 WASHC2CQ9Y4E1 1318 aa11.41□□□□□ -0.58
BRD7-202ENST00000394689 TICAM2Q86XR7 235 aa11.41□□□□□ -0.58
BRD7-202ENST00000394689 SECISBP2LQ93073 1101 aaKnown RBP11.41□□□□□ -0.58
BRD7-202ENST00000394689 PRDM4Q9UKN5 801 aa11.4□□□□□ -0.58
BRD7-202ENST00000394689 CENPJQ9HC77 1338 aaPredicted RBP11.4□□□□□ -0.58
BRD7-202ENST00000394689 IRX6P78412 446 aaPredicted RBP11.39□□□□□ -0.59
BRD7-202ENST00000394689 FAM43AQ8N2R8 423 aa11.39□□□□□ -0.59
BRD7-202ENST00000394689 STAC3Q96MF2 364 aa11.39□□□□□ -0.59
BRD7-202ENST00000394689 RNF216Q9NWF9 866 aaPredicted RBP11.39□□□□□ -0.59
BRD7-202ENST00000394689 ZNF316A6NFI3 1004 aaPredicted RBP11.37□□□□□ -0.59
BRD7-202ENST00000394689 VGFO15240 615 aaPredicted RBP11.35□□□□□ -0.59
BRD7-202ENST00000394689 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.35□□□□□ -0.59
BRD7-202ENST00000394689 WASHC2AQ641Q2 1341 aa11.35□□□□□ -0.59
BRD7-202ENST00000394689 C1QBPQ07021 282 aaKnown RBP11.34□□□□□ -0.59
BRD7-202ENST00000394689 CNPY4Q8N129 248 aa11.33□□□□□ -0.6
BRD7-202ENST00000394689 PPM1GO15355 546 aaPredicted RBP11.33□□□□□ -0.6
BRD7-202ENST00000394689 CLSTN1O94985 981 aa11.33□□□□□ -0.6
BRD7-202ENST00000394689 NOP58Q9Y2X3 529 aaKnown RBP11.32□□□□□ -0.6
BRD7-202ENST00000394689 USP35Q9P2H5 1018 aa11.32□□□□□ -0.6
BRD7-202ENST00000394689 IGSF3O75054 1194 aa11.31□□□□□ -0.6
BRD7-202ENST00000394689 PLCB2Q00722 1185 aa11.31□□□□□ -0.6
BRD7-202ENST00000394689 PUS7Q96PZ0 661 aaKnown RBP11.31□□□□□ -0.6
BRD7-202ENST00000394689 MIER1Q8N108 512 aa11.3□□□□□ -0.6
BRD7-202ENST00000394689 UBTFP17480 764 aaKnown RBP11.29□□□□□ -0.6
BRD7-202ENST00000394689 HSP90AA1P07900 732 aaKnown RBP11.29□□□□□ -0.6
BRD7-202ENST00000394689 GRIPAP1Q4V328 841 aa11.27□□□□□ -0.6
BRD7-202ENST00000394689 NBR1Q14596 966 aa11.27□□□□□ -0.61
BRD7-202ENST00000394689 DNAJC5BQ9UF47 199 aa11.27□□□□□ -0.61
BRD7-202ENST00000394689 PTMAP06454 111 aaKnown RBP11.26□□□□□ -0.61
BRD7-202ENST00000394689 NEFMP07197 916 aa11.24□□□□□ -0.61
BRD7-202ENST00000394689 WWC1Q8IX03 1113 aa11.23□□□□□ -0.61
BRD7-202ENST00000394689 CLGNO14967 610 aa11.22□□□□□ -0.61
BRD7-202ENST00000394689 MCCP23508 829 aa11.22□□□□□ -0.61
BRD7-202ENST00000394689 BRPF3Q9ULD4 1205 aa11.22□□□□□ -0.61
BRD7-202ENST00000394689 ZNF592Q92610 1267 aa11.2□□□□□ -0.62
BRD7-202ENST00000394689 PLCD4Q9BRC7 762 aa11.2□□□□□ -0.62
BRD7-202ENST00000394689 RGS3P49796 1198 aa11.2□□□□□ -0.62
BRD7-202ENST00000394689 ANP32BQ92688 251 aaKnown RBP11.2□□□□□ -0.62
BRD7-202ENST00000394689 PRDM10Q9NQV6 1147 aa11.19□□□□□ -0.62
BRD7-202ENST00000394689 KCNG1Q9UIX4 513 aa11.19□□□□□ -0.62
BRD7-202ENST00000394689 PTMSP20962 102 aa11.18□□□□□ -0.62
BRD7-202ENST00000394689 PDCL3Q9H2J4 239 aa11.18□□□□□ -0.62
BRD7-202ENST00000394689 RGS22Q8NE09 1264 aa11.18□□□□□ -0.62
BRD7-202ENST00000394689 MMP14P50281 582 aa11.17□□□□□ -0.62
BRD7-202ENST00000394689 NPM1P06748 294 aaKnown RBP eCLIP11.15□□□□□ -0.62
BRD7-202ENST00000394689 FAM193AP78312 1265 aa11.15□□□□□ -0.62
BRD7-202ENST00000394689 ZNF622Q969S3 477 aaKnown RBP eCLIP11.15□□□□□ -0.628e-7■■□□□ 13.5
BRD7-202ENST00000394689 PSMD1Q99460 953 aa11.15□□□□□ -0.62
BRD7-202ENST00000394689 FKBP8Q14318 412 aa11.14□□□□□ -0.63
BRD7-202ENST00000394689 SETQ01105 290 aaPredicted RBP11.14□□□□□ -0.63
BRD7-202ENST00000394689 AXDND1Q5T1B0 1012 aaPredicted RBP11.14□□□□□ -0.63
BRD7-202ENST00000394689 ZNF830Q96NB3 372 aaPredicted RBP11.13□□□□□ -0.63
BRD7-202ENST00000394689 CFAP44Q96MT7 982 aa11.11□□□□□ -0.63
BRD7-202ENST00000394689 TMEM51Q9NW97 253 aa11.11□□□□□ -0.63
BRD7-202ENST00000394689 PHF14O94880 888 aa11.11□□□□□ -0.63
BRD7-202ENST00000394689 SMAP1Q8IYB5 467 aaPredicted RBP11.11□□□□□ -0.63
BRD7-202ENST00000394689 IRX3P78415 501 aaPredicted RBP11.1□□□□□ -0.63
BRD7-202ENST00000394689 UTP14CQ5TAP6 766 aaKnown RBP11.08□□□□□ -0.64
BRD7-202ENST00000394689 TMED8Q6PL24 325 aaPredicted RBP11.08□□□□□ -0.64
BRD7-202ENST00000394689 GSE1Q14687 1217 aa11.06□□□□□ -0.64
BRD7-202ENST00000394689 PAK3O75914 559 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms