RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 MYH16Q9H6N6 1097 aa21.83■■□□□ 1.08
RGP1-201ENST00000378078 PPP1R15AO75807 674 aaPredicted RBP21.82■■□□□ 1.08
RGP1-201ENST00000378078 CCDC136Q96JN2 1154 aa21.82■■□□□ 1.08
RGP1-201ENST00000378078 TONSLQ96HA7 1378 aa21.82■■□□□ 1.08
RGP1-201ENST00000378078 AMER1Q5JTC6 1135 aaPredicted RBP21.81■■□□□ 1.08
RGP1-201ENST00000378078 LAS1LQ9Y4W2 734 aaKnown RBP21.79■■□□□ 1.08
RGP1-201ENST00000378078 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.79■■□□□ 1.08
RGP1-201ENST00000378078 CLSTN1O94985 981 aa21.77■■□□□ 1.08
RGP1-201ENST00000378078 KCNH8Q96L42 1107 aa21.76■■□□□ 1.07
RGP1-201ENST00000378078 ACIN1Q9UKV3 1341 aaKnown RBP21.67■■□□□ 1.06
RGP1-201ENST00000378078 NAP1L2Q9ULW6 460 aaPredicted RBP21.67■■□□□ 1.06
RGP1-201ENST00000378078 RGL3Q3MIN7 710 aa21.63■■□□□ 1.05
RGP1-201ENST00000378078 GLIPR1L2Q4G1C9 344 aa21.62■■□□□ 1.05
RGP1-201ENST00000378078 PLCB2Q00722 1185 aa21.61■■□□□ 1.05
RGP1-201ENST00000378078 MRS2Q9HD23 443 aa21.61■■□□□ 1.05
RGP1-201ENST00000378078 NEUROD2Q15784 382 aa21.61■■□□□ 1.05
RGP1-201ENST00000378078 ISY1Q9ULR0 285 aaKnown RBP21.6■■□□□ 1.05
RGP1-201ENST00000378078 TNNT2P45379 298 aaPredicted RBP21.6■■□□□ 1.05
RGP1-201ENST00000378078 ZRSR1Q15695 479 aaKnown RBP21.59■■□□□ 1.05
RGP1-201ENST00000378078 SOX12O15370 315 aa21.59■■□□□ 1.05
RGP1-201ENST00000378078 PTMAP06454 111 aaKnown RBP21.57■■□□□ 1.04
RGP1-201ENST00000378078 DNTTIP2Q5QJE6 756 aaKnown RBP21.57■■□□□ 1.04
RGP1-201ENST00000378078 TRIM44Q96DX7 344 aaPredicted RBP21.53■■□□□ 1.04
RGP1-201ENST00000378078 RRP7BPQ9NSQ0 103 aa21.52■■□□□ 1.04
RGP1-201ENST00000378078 ANO8Q9HCE9 1232 aaPredicted RBP21.52■■□□□ 1.04
RGP1-201ENST00000378078 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.52■■□□□ 1.03
RGP1-201ENST00000378078 GOLGA2Q08379 1002 aa21.48■■□□□ 1.03
RGP1-201ENST00000378078 TRHP20396 242 aaPredicted RBP21.48■■□□□ 1.03
RGP1-201ENST00000378078 RTN4Q9NQC3 1192 aaKnown RBP21.47■■□□□ 1.03
RGP1-201ENST00000378078 CHMP7Q8WUX9 453 aaPredicted RBP21.46■■□□□ 1.03
RGP1-201ENST00000378078 OS9Q13438 667 aaPredicted RBP21.46■■□□□ 1.03
RGP1-201ENST00000378078 TSPY4P0CV99 314 aa21.45■■□□□ 1.02
RGP1-201ENST00000378078 TSPY10P0CW01 314 aa21.45■■□□□ 1.02
RGP1-201ENST00000378078 CSRNP3Q8WYN3 585 aa21.43■■□□□ 1.02
RGP1-201ENST00000378078 FTSJ3Q8IY81 847 aaKnown RBP21.43■■□□□ 1.02
RGP1-201ENST00000378078 PRM3Q9NNZ6 103 aa21.42■■□□□ 1.02
RGP1-201ENST00000378078 PDE4CQ08493 712 aa21.41■■□□□ 1.02
RGP1-201ENST00000378078 MLECQ14165 292 aa21.4■■□□□ 1.02
RGP1-201ENST00000378078 FGD1P98174 961 aa21.39■■□□□ 1.02
RGP1-201ENST00000378078 CASC1Q6TDU7 716 aa21.39■■□□□ 1.01
RGP1-201ENST00000378078 SPRYD3Q8NCJ5 442 aa21.37■■□□□ 1.01
RGP1-201ENST00000378078 FRAT1Q92837 279 aaPredicted RBP21.35■■□□□ 1.01
RGP1-201ENST00000378078 BECN1Q14457 450 aa21.35■■□□□ 1.01
RGP1-201ENST00000378078 ERICH6BQ5W0A0 696 aa21.34■■□□□ 1.01
RGP1-201ENST00000378078 ZNF330Q9Y3S2 320 aaPredicted RBP21.33■■□□□ 1
RGP1-201ENST00000378078 KCNJ4P48050 445 aa21.33■■□□□ 1
RGP1-201ENST00000378078 GOLGA6L22H0YM25 854 aa21.32■■□□□ 1
RGP1-201ENST00000378078 CC2D1BQ5T0F9 858 aaKnown RBP21.29■■□□□ 1
RGP1-201ENST00000378078 SCRIBQ14160 1630 aa21.29■■□□□ 1
RGP1-201ENST00000378078 RGS3P49796 1198 aa21.29■■□□□ 1
RGP1-201ENST00000378078 POGKQ9P215 609 aa21.29■■□□□ 1
RGP1-201ENST00000378078 U2SURPO15042 1029 aaKnown RBP21.28■■□□□ 1
RGP1-201ENST00000378078 SAFB2Q14151 953 aaKnown RBP eCLIP21.28■■□□□ 1
RGP1-201ENST00000378078 NAP1L5Q96NT1 182 aaPredicted RBP21.28■■□□□ 1
RGP1-201ENST00000378078 MTUS2Q5JR59 1369 aa21.23■□□□□ 0.99
RGP1-201ENST00000378078 APBB1O00213 710 aa21.23■□□□□ 0.99
RGP1-201ENST00000378078 CFAP53Q96M91 514 aa21.23■□□□□ 0.99
RGP1-201ENST00000378078 MAPK8IP3Q9UPT6 1336 aa21.22■□□□□ 0.99
RGP1-201ENST00000378078 HSP90AB1P08238 724 aaKnown RBP21.22■□□□□ 0.99
RGP1-201ENST00000378078 MIER1Q8N108 512 aa21.21■□□□□ 0.99
RGP1-201ENST00000378078 ARID3AQ99856 593 aa21.21■□□□□ 0.99
RGP1-201ENST00000378078 CCDC9Q9Y3X0 531 aaKnown RBP21.2■□□□□ 0.98
RGP1-201ENST00000378078 DDRGK1Q96HY6 314 aa21.2■□□□□ 0.98
RGP1-201ENST00000378078 KNSTRNQ9Y448 316 aa21.2■□□□□ 0.98
RGP1-201ENST00000378078 FBXO3Q9UK99 471 aa21.19■□□□□ 0.98
RGP1-201ENST00000378078 PAK3O75914 559 aaPredicted RBP21.15■□□□□ 0.98
RGP1-201ENST00000378078 DRC7Q8IY82 874 aa21.14■□□□□ 0.98
RGP1-201ENST00000378078 EIF4G2P78344 907 aaKnown RBP eCLIP21.14■□□□□ 0.97
RGP1-201ENST00000378078 SUPT16HQ9Y5B9 1047 aaKnown RBP21.13■□□□□ 0.97
RGP1-201ENST00000378078 GNL2Q13823 731 aaKnown RBP21.11■□□□□ 0.97
RGP1-201ENST00000378078 GOLGA6L6A8MZA4 724 aa21.08■□□□□ 0.96
RGP1-201ENST00000378078 STK26Q9P289 416 aa21.08■□□□□ 0.96
RGP1-201ENST00000378078 CARD11Q9BXL7 1154 aa21.07■□□□□ 0.96
RGP1-201ENST00000378078 GOLGA6L4A6NEF3 574 aa21.05■□□□□ 0.96
RGP1-201ENST00000378078 WWC1Q8IX03 1113 aa21.02■□□□□ 0.96
RGP1-201ENST00000378078 CREBRFQ8IUR6 639 aa21.02■□□□□ 0.96
RGP1-201ENST00000378078 NOC3LQ8WTT2 800 aaKnown RBP21.01■□□□□ 0.95
RGP1-201ENST00000378078 CSB-PGBD3P0DP91 1061 aa21.01■□□□□ 0.95
RGP1-201ENST00000378078 SRPK2P78362 688 aaKnown RBP21.01■□□□□ 0.95
RGP1-201ENST00000378078 CHMP3Q9Y3E7 222 aa21.01■□□□□ 0.95
RGP1-201ENST00000378078 PLEKHD1A6NEE1 506 aa21.01■□□□□ 0.95
RGP1-201ENST00000378078 NUDCQ9Y266 331 aa20.98■□□□□ 0.95
RGP1-201ENST00000378078 G3V3G9 751 aa20.98■□□□□ 0.95
RGP1-201ENST00000378078 DCAF8Q5TAQ9 597 aa20.98■□□□□ 0.95
RGP1-201ENST00000378078 B4GALNT3Q6L9W6 998 aa20.95■□□□□ 0.94
RGP1-201ENST00000378078 HSP90B1P14625 803 aaKnown RBP20.95■□□□□ 0.94
RGP1-201ENST00000378078 VPS53Q5VIR6 699 aa20.94■□□□□ 0.94
RGP1-201ENST00000378078 PNNQ9H307 717 aaKnown RBP20.94■□□□□ 0.94
RGP1-201ENST00000378078 TMX4Q9H1E5 349 aaPredicted RBP20.92■□□□□ 0.94
RGP1-201ENST00000378078 RTF1Q92541 710 aaKnown RBP20.9■□□□□ 0.94
RGP1-201ENST00000378078 CFDP1Q9UEE9 299 aaPredicted RBP20.9■□□□□ 0.94
RGP1-201ENST00000378078 KIAA2012Q0VF49 1180 aa20.88■□□□□ 0.93
RGP1-201ENST00000378078 NOL8Q76FK4 1167 aaKnown RBP20.86■□□□□ 0.93
RGP1-201ENST00000378078 ANP32EQ9BTT0 268 aa20.86■□□□□ 0.93
RGP1-201ENST00000378078 NUTM2DQ5VT03 806 aaPredicted RBP20.86■□□□□ 0.93
RGP1-201ENST00000378078 ZCCHC6Q5VYS8 1495 aaKnown RBP20.85■□□□□ 0.93
RGP1-201ENST00000378078 HSCBQ8IWL3 235 aa20.85■□□□□ 0.93
RGP1-201ENST00000378078 MSH5O43196 834 aa20.84■□□□□ 0.93
RGP1-201ENST00000378078 KRI1Q8N9T8 703 aaKnown RBP20.84■□□□□ 0.93
RGP1-201ENST00000378078 GZF1Q9H116 711 aaPredicted RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms