RNA–Protein interactions for RNA: ENST00000376590.8

MTHFR-204, Transcript of methylenetetrahydrofolate reductase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MTHFR, Length 7,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-204ENST00000376590 CSRNP3Q8WYN3 585 aa15.54■□□□□ 0.08
MTHFR-204ENST00000376590 MRS2Q9HD23 443 aa15.53■□□□□ 0.08
MTHFR-204ENST00000376590 NCLP19338 710 aaKnown RBP15.52■□□□□ 0.07
MTHFR-204ENST00000376590 PPP1R15AO75807 674 aaPredicted RBP15.51■□□□□ 0.07
MTHFR-204ENST00000376590 NCBP3Q53F19 620 aaKnown RBP15.5■□□□□ 0.07
MTHFR-204ENST00000376590 PPM1GO15355 546 aaPredicted RBP15.48■□□□□ 0.07
MTHFR-204ENST00000376590 TRIM44Q96DX7 344 aaPredicted RBP15.46■□□□□ 0.06
MTHFR-204ENST00000376590 NPHP1O15259 732 aa15.45■□□□□ 0.06
MTHFR-204ENST00000376590 TSPY4P0CV99 314 aa15.44■□□□□ 0.06
MTHFR-204ENST00000376590 TSPY10P0CW01 314 aa15.44■□□□□ 0.06
MTHFR-204ENST00000376590 ZRSR1Q15695 479 aaKnown RBP15.44■□□□□ 0.06
MTHFR-204ENST00000376590 ARID4BQ4LE39 1312 aaPredicted RBP15.42■□□□□ 0.06
MTHFR-204ENST00000376590 LMOD2Q6P5Q4 547 aa15.42■□□□□ 0.06
MTHFR-204ENST00000376590 LAS1LQ9Y4W2 734 aaKnown RBP15.42■□□□□ 0.06
MTHFR-204ENST00000376590 PTMAP06454 111 aaKnown RBP15.42■□□□□ 0.06
MTHFR-204ENST00000376590 KCNH8Q96L42 1107 aa15.42■□□□□ 0.06
MTHFR-204ENST00000376590 DNTTIP2Q5QJE6 756 aaKnown RBP15.39■□□□□ 0.05
MTHFR-204ENST00000376590 RGL3Q3MIN7 710 aa15.39■□□□□ 0.05
MTHFR-204ENST00000376590 BECN1Q14457 450 aa15.38■□□□□ 0.05
MTHFR-204ENST00000376590 GOLGA6L22H0YM25 854 aa15.36■□□□□ 0.05
MTHFR-204ENST00000376590 PLCB2Q00722 1185 aa15.36■□□□□ 0.05
MTHFR-204ENST00000376590 NEUROD2Q15784 382 aa15.35■□□□□ 0.05
MTHFR-204ENST00000376590 RRP7BPQ9NSQ0 103 aa15.35■□□□□ 0.05
MTHFR-204ENST00000376590 NAP1L2Q9ULW6 460 aaPredicted RBP15.33■□□□□ 0.04
MTHFR-204ENST00000376590 CHMP7Q8WUX9 453 aaPredicted RBP15.32■□□□□ 0.04
MTHFR-204ENST00000376590 FTSJ3Q8IY81 847 aaKnown RBP15.32■□□□□ 0.04
MTHFR-204ENST00000376590 CASC1Q6TDU7 716 aa15.31■□□□□ 0.04
MTHFR-204ENST00000376590 CLSTN1O94985 981 aa15.3■□□□□ 0.04
MTHFR-204ENST00000376590 DDRGK1Q96HY6 314 aa15.3■□□□□ 0.04
MTHFR-204ENST00000376590 MTUS2Q5JR59 1369 aa15.29■□□□□ 0.04
MTHFR-204ENST00000376590 TNNT2P45379 298 aaPredicted RBP15.28■□□□□ 0.04
MTHFR-204ENST00000376590 EIF4G2P78344 907 aaKnown RBP eCLIP15.26■□□□□ 0.032e-18■■■□□ 14.6
MTHFR-204ENST00000376590 MIER1Q8N108 512 aa15.26■□□□□ 0.03
MTHFR-204ENST00000376590 OS9Q13438 667 aaPredicted RBP15.26■□□□□ 0.03
MTHFR-204ENST00000376590 CFAP53Q96M91 514 aa15.26■□□□□ 0.03
MTHFR-204ENST00000376590 FGD1P98174 961 aa15.26■□□□□ 0.03
MTHFR-204ENST00000376590 GOLGA2Q08379 1002 aa15.24■□□□□ 0.03
MTHFR-204ENST00000376590 RTN4Q9NQC3 1192 aaKnown RBP15.23■□□□□ 0.03
MTHFR-204ENST00000376590 ISY1Q9ULR0 285 aaKnown RBP15.22■□□□□ 0.03
MTHFR-204ENST00000376590 FRAT1Q92837 279 aaPredicted RBP15.22■□□□□ 0.03
MTHFR-204ENST00000376590 SOX12O15370 315 aa15.21■□□□□ 0.03
MTHFR-204ENST00000376590 KNSTRNQ9Y448 316 aa15.21■□□□□ 0.03
MTHFR-204ENST00000376590 KCNJ4P48050 445 aa15.21■□□□□ 0.03
MTHFR-204ENST00000376590 RGS3P49796 1198 aa15.21■□□□□ 0.03
MTHFR-204ENST00000376590 NAP1L5Q96NT1 182 aaPredicted RBP15.2■□□□□ 0.02
MTHFR-204ENST00000376590 MAPK8IP3Q9UPT6 1336 aa15.2■□□□□ 0.02
MTHFR-204ENST00000376590 ANP32EQ9BTT0 268 aa15.18■□□□□ 0.02
MTHFR-204ENST00000376590 POGKQ9P215 609 aa15.18■□□□□ 0.02
MTHFR-204ENST00000376590 AMER1Q5JTC6 1135 aaPredicted RBP15.16■□□□□ 0.02
MTHFR-204ENST00000376590 HSP90AB1P08238 724 aaKnown RBP15.16■□□□□ 0.02
MTHFR-204ENST00000376590 U2SURPO15042 1029 aaKnown RBP15.16■□□□□ 0.02
MTHFR-204ENST00000376590 SUPT16HQ9Y5B9 1047 aaKnown RBP15.16■□□□□ 0.02
MTHFR-204ENST00000376590 SCRIBQ14160 1630 aa15.15■□□□□ 0.02
MTHFR-204ENST00000376590 CC2D1BQ5T0F9 858 aaKnown RBP15.13■□□□□ 0.01
MTHFR-204ENST00000376590 GOLGA6L6A8MZA4 724 aa15.12■□□□□ 0.01
MTHFR-204ENST00000376590 CARD11Q9BXL7 1154 aa15.11■□□□□ 0.01
MTHFR-204ENST00000376590 SPRYD3Q8NCJ5 442 aa15.11■□□□□ 0.01
MTHFR-204ENST00000376590 PLEKHD1A6NEE1 506 aa15.11■□□□□ 0.01
MTHFR-204ENST00000376590 NUDCQ9Y266 331 aa15.09■□□□□ 0.01
MTHFR-204ENST00000376590 GOLGA6L4A6NEF3 574 aa15.08■□□□□ 0
MTHFR-204ENST00000376590 MLECQ14165 292 aa15.08■□□□□ 0
MTHFR-204ENST00000376590 CDCA8Q53HL2 280 aa15.07■□□□□ 0
MTHFR-204ENST00000376590 TRHP20396 242 aaPredicted RBP15.07■□□□□ 0
MTHFR-204ENST00000376590 ERICH6BQ5W0A0 696 aa15.06■□□□□ 0
MTHFR-204ENST00000376590 DRC7Q8IY82 874 aa15.05■□□□□ 0
MTHFR-204ENST00000376590 SAFB2Q14151 953 aaKnown RBP eCLIP15.04■□□□□ -0
MTHFR-204ENST00000376590 PRM3Q9NNZ6 103 aa15.04■□□□□ -0
MTHFR-204ENST00000376590 ZNF330Q9Y3S2 320 aaPredicted RBP15.04■□□□□ -0
MTHFR-204ENST00000376590 APBB1O00213 710 aa15.04■□□□□ -0
MTHFR-204ENST00000376590 NRDCO43847 1150 aa15.02■□□□□ -0
MTHFR-204ENST00000376590 CFDP1Q9UEE9 299 aaPredicted RBP15.02□□□□□ -0.01
MTHFR-204ENST00000376590 PDE4CQ08493 712 aa15.02□□□□□ -0.01
MTHFR-204ENST00000376590 GNL2Q13823 731 aaKnown RBP15.02□□□□□ -0.01
MTHFR-204ENST00000376590 SRPK2P78362 688 aaKnown RBP14.97□□□□□ -0.01
MTHFR-204ENST00000376590 ZCCHC6Q5VYS8 1495 aaKnown RBP14.97□□□□□ -0.01
MTHFR-204ENST00000376590 B4GALNT3Q6L9W6 998 aa14.97□□□□□ -0.01
MTHFR-204ENST00000376590 HSCBQ8IWL3 235 aa14.97□□□□□ -0.01
MTHFR-204ENST00000376590 ARID3AQ99856 593 aa14.97□□□□□ -0.01
MTHFR-204ENST00000376590 CHAF1AQ13111 956 aaPredicted RBP14.96□□□□□ -0.01
MTHFR-204ENST00000376590 ANO8Q9HCE9 1232 aaPredicted RBP14.96□□□□□ -0.01
MTHFR-204ENST00000376590 PNNQ9H307 717 aaKnown RBP14.95□□□□□ -0.02
MTHFR-204ENST00000376590 CLIP1P30622 1438 aa14.95□□□□□ -0.02
MTHFR-204ENST00000376590 PAK3O75914 559 aaPredicted RBP14.95□□□□□ -0.02
MTHFR-204ENST00000376590 NOP58Q9Y2X3 529 aaKnown RBP14.93□□□□□ -0.02
MTHFR-204ENST00000376590 MCCP23508 829 aa14.93□□□□□ -0.02
MTHFR-204ENST00000376590 MSNP26038 577 aaKnown RBP14.93□□□□□ -0.02
MTHFR-204ENST00000376590 STK26Q9P289 416 aa14.93□□□□□ -0.02
MTHFR-204ENST00000376590 NOC3LQ8WTT2 800 aaKnown RBP14.93□□□□□ -0.02
MTHFR-204ENST00000376590 CHMP4BQ9H444 224 aaKnown RBP14.93□□□□□ -0.02
MTHFR-204ENST00000376590 RSF1Q96T23 1441 aaPredicted RBP14.93□□□□□ -0.02
MTHFR-204ENST00000376590 RTF1Q92541 710 aaKnown RBP14.92□□□□□ -0.02
MTHFR-204ENST00000376590 SIN3AQ96ST3 1273 aa14.92□□□□□ -0.02
MTHFR-204ENST00000376590 CCDC9Q9Y3X0 531 aaKnown RBP14.91□□□□□ -0.02
MTHFR-204ENST00000376590 KIAA2012Q0VF49 1180 aa14.9□□□□□ -0.02
MTHFR-204ENST00000376590 MS4A1P11836 297 aa14.89□□□□□ -0.03
MTHFR-204ENST00000376590 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.89□□□□□ -0.03
MTHFR-204ENST00000376590 CSB-PGBD3P0DP91 1061 aa14.89□□□□□ -0.03
MTHFR-204ENST00000376590 PPP4R2Q9NY27 417 aa14.89□□□□□ -0.03
MTHFR-204ENST00000376590 DCAF11Q8TEB1 546 aa14.88□□□□□ -0.03
MTHFR-204ENST00000376590 CHMP3Q9Y3E7 222 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms