RNA–Protein interactions for RNA: ENST00000374787.7

SMC2-202, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC2, Length 4,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-202ENST00000374787 NEFLP07196 543 aa8.6□□□□□ -1.03
SMC2-202ENST00000374787 KCTD17Q8N5Z5 321 aa8.6□□□□□ -1.03
SMC2-202ENST00000374787 RSPH6AQ9H0K4 717 aa8.59□□□□□ -1.03
SMC2-202ENST00000374787 IRX6P78412 446 aaPredicted RBP8.58□□□□□ -1.04
SMC2-202ENST00000374787 FOXD4L5Q5VV16 416 aaPredicted RBP8.58□□□□□ -1.04
SMC2-202ENST00000374787 FOXD4L4Q8WXT5 416 aaPredicted RBP8.58□□□□□ -1.04
SMC2-202ENST00000374787 MTMR7Q9Y216 660 aa8.57□□□□□ -1.04
SMC2-202ENST00000374787 PABPN1Q86U42 306 aaKnown RBP eCLIP8.56□□□□□ -1.04
SMC2-202ENST00000374787 RBM25P49756 843 aaKnown RBP8.56□□□□□ -1.04
SMC2-202ENST00000374787 NEUROD2Q15784 382 aa8.56□□□□□ -1.04
SMC2-202ENST00000374787 PKNOX2Q96KN3 472 aa8.54□□□□□ -1.04
SMC2-202ENST00000374787 RGS22Q8NE09 1264 aa8.54□□□□□ -1.04
SMC2-202ENST00000374787 VASPP50552 380 aaPredicted RBP8.52□□□□□ -1.04
SMC2-202ENST00000374787 CCDC136Q96JN2 1154 aa8.51□□□□□ -1.05
SMC2-202ENST00000374787 PIAS4Q8N2W9 510 aaPredicted RBP8.5□□□□□ -1.05
SMC2-202ENST00000374787 ZNF692Q9BU19 519 aaPredicted RBP8.5□□□□□ -1.05
SMC2-202ENST00000374787 APBB1O00213 710 aa8.5□□□□□ -1.05
SMC2-202ENST00000374787 BRPF3Q9ULD4 1205 aa8.5□□□□□ -1.05
SMC2-202ENST00000374787 USP35Q9P2H5 1018 aa8.47□□□□□ -1.05
SMC2-202ENST00000374787 DNAJC5BQ9UF47 199 aa8.47□□□□□ -1.05
SMC2-202ENST00000374787 RGL2O15211 777 aa8.46□□□□□ -1.05
SMC2-202ENST00000374787 FGD1P98174 961 aa8.45□□□□□ -1.06
SMC2-202ENST00000374787 ZFP91Q96JP5 570 aaPredicted RBP8.45□□□□□ -1.06
SMC2-202ENST00000374787 ECM2O94769 699 aaPredicted RBP8.44□□□□□ -1.06
SMC2-202ENST00000374787 CWC22Q9HCG8 908 aaKnown RBP8.44□□□□□ -1.06
SMC2-202ENST00000374787 A0A0U1RQG5 324 aaPredicted RBP8.43□□□□□ -1.06
SMC2-202ENST00000374787 AEBP1Q8IUX7 1158 aa8.43□□□□□ -1.06
SMC2-202ENST00000374787 FAM177A1Q8N128 213 aaPredicted RBP8.43□□□□□ -1.06
SMC2-202ENST00000374787 ZNF592Q92610 1267 aa8.43□□□□□ -1.06
SMC2-202ENST00000374787 LMOD2Q6P5Q4 547 aa8.41□□□□□ -1.06
SMC2-202ENST00000374787 TMED8Q6PL24 325 aaPredicted RBP8.41□□□□□ -1.06
SMC2-202ENST00000374787 BCCIPQ9P287 314 aaKnown RBP eCLIP8.41□□□□□ -1.06
SMC2-202ENST00000374787 MAPK8IP2Q13387 824 aaPredicted RBP8.39□□□□□ -1.07
SMC2-202ENST00000374787 CHGAP10645 457 aaKnown RBP8.38□□□□□ -1.07
SMC2-202ENST00000374787 SLC24A3Q9HC58 644 aa8.37□□□□□ -1.07
SMC2-202ENST00000374787 CERS3Q8IU89 383 aa8.37□□□□□ -1.07
SMC2-202ENST00000374787 MFAP1P55081 439 aaKnown RBP8.36□□□□□ -1.07
SMC2-202ENST00000374787 CCDC82Q8N4S0 544 aa8.36□□□□□ -1.07
SMC2-202ENST00000374787 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.36□□□□□ -1.07
SMC2-202ENST00000374787 PPM1GO15355 546 aaPredicted RBP8.35□□□□□ -1.07
SMC2-202ENST00000374787 RSPH4AQ5TD94 716 aa8.34□□□□□ -1.07
SMC2-202ENST00000374787 TMCO4Q5TGY1 634 aa8.33□□□□□ -1.08
SMC2-202ENST00000374787 SLC4A2P04920 1241 aa8.32□□□□□ -1.08
SMC2-202ENST00000374787 ATXN8OSP0DMR3 200 aa8.32□□□□□ -1.08
SMC2-202ENST00000374787 ZNF526Q8TF50 670 aaPredicted RBP8.32□□□□□ -1.08
SMC2-202ENST00000374787 TICAM2Q86XR7 235 aa8.31□□□□□ -1.08
SMC2-202ENST00000374787 GZF1Q9H116 711 aaPredicted RBP8.3□□□□□ -1.08
SMC2-202ENST00000374787 ZEB1P37275 1124 aaPredicted RBP8.29□□□□□ -1.08
SMC2-202ENST00000374787 MKRN3Q13064 507 aaKnown RBP8.29□□□□□ -1.08
SMC2-202ENST00000374787 ARID4BQ4LE39 1312 aaPredicted RBP8.28□□□□□ -1.08
SMC2-202ENST00000374787 PSMD1Q99460 953 aa8.28□□□□□ -1.08
SMC2-202ENST00000374787 E9PSI1 815 aa8.28□□□□□ -1.08
SMC2-202ENST00000374787 GPBP1L1Q9HC44 474 aaPredicted RBP8.26□□□□□ -1.09
SMC2-202ENST00000374787 IL27Q8NEV9 243 aa8.26□□□□□ -1.09
SMC2-202ENST00000374787 PRDM16Q9HAZ2 1276 aa8.25□□□□□ -1.09
SMC2-202ENST00000374787 ZC3H15Q8WU90 426 aaKnown RBP8.24□□□□□ -1.09
SMC2-202ENST00000374787 ATF5Q9Y2D1 282 aaPredicted RBP8.24□□□□□ -1.09
SMC2-202ENST00000374787 KDM4AO75164 1064 aa8.23□□□□□ -1.09
SMC2-202ENST00000374787 NAP1L5Q96NT1 182 aaPredicted RBP8.23□□□□□ -1.09
SMC2-202ENST00000374787 PRDM10Q9NQV6 1147 aa8.23□□□□□ -1.09
SMC2-202ENST00000374787 CLSTN1O94985 981 aa8.23□□□□□ -1.09
SMC2-202ENST00000374787 ZNF316A6NFI3 1004 aaPredicted RBP8.22□□□□□ -1.09
SMC2-202ENST00000374787 TRAIPQ9BWF2 469 aa8.2□□□□□ -1.1
SMC2-202ENST00000374787 ZNF326Q5BKZ1 582 aaKnown RBP8.19□□□□□ -1.1
SMC2-202ENST00000374787 ANO8Q9HCE9 1232 aaPredicted RBP8.19□□□□□ -1.1
SMC2-202ENST00000374787 CCDC27Q2M243 656 aa8.18□□□□□ -1.1
SMC2-202ENST00000374787 NKX1-1Q15270 411 aaPredicted RBP8.16□□□□□ -1.1
SMC2-202ENST00000374787 CC2D2BQ6DHV5 1058 aa8.16□□□□□ -1.1
SMC2-202ENST00000374787 IRF5Q13568 498 aa8.16□□□□□ -1.1
SMC2-202ENST00000374787 FOXD1Q16676 465 aa8.16□□□□□ -1.1
SMC2-202ENST00000374787 WDR70Q9NW82 654 aa8.16□□□□□ -1.1
SMC2-202ENST00000374787 MYCNP04198 464 aaPredicted RBP8.15□□□□□ -1.1
SMC2-202ENST00000374787 AAMPQ13685 434 aa8.15□□□□□ -1.11
SMC2-202ENST00000374787 CLUAP1Q96AJ1 413 aa8.15□□□□□ -1.11
SMC2-202ENST00000374787 KCNV2Q8TDN2 545 aa8.14□□□□□ -1.11
SMC2-202ENST00000374787 SPDYE4A6NLX3 237 aa8.13□□□□□ -1.11
SMC2-202ENST00000374787 FBXW7Q969H0 707 aa8.13□□□□□ -1.11
SMC2-202ENST00000374787 RETREG2Q8NC44 543 aa8.13□□□□□ -1.11
SMC2-202ENST00000374787 CCDC125Q86Z20 511 aa8.12□□□□□ -1.11
SMC2-202ENST00000374787 TRIM41Q8WV44 630 aa8.12□□□□□ -1.11
SMC2-202ENST00000374787 SMARCA5O60264 1052 aaPredicted RBP8.1□□□□□ -1.11
SMC2-202ENST00000374787 CNPY4Q8N129 248 aa8.09□□□□□ -1.12
SMC2-202ENST00000374787 NCLP19338 710 aaKnown RBP8.08□□□□□ -1.12
SMC2-202ENST00000374787 HS6ST3Q8IZP7 471 aa8.08□□□□□ -1.12
SMC2-202ENST00000374787 TEX2Q8IWB9 1127 aa8.08□□□□□ -1.12
SMC2-202ENST00000374787 GTPBP6O43824 516 aaPredicted RBP8.08□□□□□ -1.12
SMC2-202ENST00000374787 PROM2Q8N271 834 aa8.07□□□□□ -1.12
SMC2-202ENST00000374787 SPOCK2Q92563 424 aa8.07□□□□□ -1.12
SMC2-202ENST00000374787 CADPSQ9ULU8 1353 aa8.07□□□□□ -1.12
SMC2-202ENST00000374787 ZNF777Q9ULD5 760 aaPredicted RBP8.04□□□□□ -1.12
SMC2-202ENST00000374787 UNCXA6NJT0 531 aa8.04□□□□□ -1.12
SMC2-202ENST00000374787 TRAK2O60296 914 aa8.04□□□□□ -1.12
SMC2-202ENST00000374787 BRD1O95696 1058 aa8.03□□□□□ -1.12
SMC2-202ENST00000374787 P3H3Q8IVL6 736 aa8.02□□□□□ -1.13
SMC2-202ENST00000374787 PLCD4Q9BRC7 762 aa8.02□□□□□ -1.13
SMC2-202ENST00000374787 KDM4CQ9H3R0 1056 aa8.01□□□□□ -1.13
SMC2-202ENST00000374787 BARGINQ6ZT62 677 aa8□□□□□ -1.13
SMC2-202ENST00000374787 LOC102724159A0A0B4J2E5 919 aa8□□□□□ -1.13
SMC2-202ENST00000374787 PWP2Q15269 919 aaKnown RBP8□□□□□ -1.13
SMC2-202ENST00000374787 MYT1LQ9UL68 1186 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms