RNA–Protein interactions for RNA: ENST00000363016.1

RNU6-249P-201, Transcript of RNA, U6 small nuclear 249, pseudogene, humanhuman

BASIC

Gene RNU6-249P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-249P-201ENST00000363016 PSMD1Q99460 953 aa7.68□□□□□ -1.18
RNU6-249P-201ENST00000363016 BRPF1P55201 1214 aaPredicted RBP7.67□□□□□ -1.18
RNU6-249P-201ENST00000363016 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.67□□□□□ -1.18
RNU6-249P-201ENST00000363016 PKD2Q13563 968 aa7.66□□□□□ -1.18
RNU6-249P-201ENST00000363016 ZEB1P37275 1124 aaPredicted RBP7.63□□□□□ -1.19
RNU6-249P-201ENST00000363016 NAP1L5Q96NT1 182 aaPredicted RBP7.63□□□□□ -1.19
RNU6-249P-201ENST00000363016 SENP3Q9H4L4 574 aaPredicted RBP7.63□□□□□ -1.19
RNU6-249P-201ENST00000363016 ARID4BQ4LE39 1312 aaPredicted RBP7.62□□□□□ -1.19
RNU6-249P-201ENST00000363016 RBM25P49756 843 aaKnown RBP7.62□□□□□ -1.19
RNU6-249P-201ENST00000363016 USP35Q9P2H5 1018 aa7.61□□□□□ -1.19
RNU6-249P-201ENST00000363016 RGS22Q8NE09 1264 aa7.6□□□□□ -1.19
RNU6-249P-201ENST00000363016 NEUROD2Q15784 382 aa7.59□□□□□ -1.19
RNU6-249P-201ENST00000363016 ZNF592Q92610 1267 aa7.58□□□□□ -1.2
RNU6-249P-201ENST00000363016 E9PSI1 815 aa7.57□□□□□ -1.2
RNU6-249P-201ENST00000363016 CC2D2BQ6DHV5 1058 aa7.57□□□□□ -1.2
RNU6-249P-201ENST00000363016 MTMR7Q9Y216 660 aa7.57□□□□□ -1.2
RNU6-249P-201ENST00000363016 CLSPNQ9HAW4 1339 aa7.56□□□□□ -1.2
RNU6-249P-201ENST00000363016 ATXN8OSP0DMR3 200 aa7.56□□□□□ -1.2
RNU6-249P-201ENST00000363016 PPM1GO15355 546 aaPredicted RBP7.55□□□□□ -1.2
RNU6-249P-201ENST00000363016 NCLP19338 710 aaKnown RBP7.54□□□□□ -1.2
RNU6-249P-201ENST00000363016 TMCO4Q5TGY1 634 aa7.54□□□□□ -1.2
RNU6-249P-201ENST00000363016 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.54□□□□□ -1.2
RNU6-249P-201ENST00000363016 FAM177A1Q8N128 213 aaPredicted RBP7.54□□□□□ -1.2
RNU6-249P-201ENST00000363016 CCDC136Q96JN2 1154 aa7.54□□□□□ -1.2
RNU6-249P-201ENST00000363016 C1orf115Q9H7X2 142 aa7.54□□□□□ -1.2
RNU6-249P-201ENST00000363016 CERS3Q8IU89 383 aa7.53□□□□□ -1.2
RNU6-249P-201ENST00000363016 APBB1O00213 710 aa7.52□□□□□ -1.21
RNU6-249P-201ENST00000363016 TRHP20396 242 aaPredicted RBP7.52□□□□□ -1.21
RNU6-249P-201ENST00000363016 SETQ01105 290 aaPredicted RBP7.52□□□□□ -1.21
RNU6-249P-201ENST00000363016 ZFP91Q96JP5 570 aaPredicted RBP7.52□□□□□ -1.21
RNU6-249P-201ENST00000363016 PTMSP20962 102 aa7.51□□□□□ -1.21
RNU6-249P-201ENST00000363016 A0A0U1RQG5 324 aaPredicted RBP7.5□□□□□ -1.21
RNU6-249P-201ENST00000363016 VASPP50552 380 aaPredicted RBP7.5□□□□□ -1.21
RNU6-249P-201ENST00000363016 ZNF692Q9BU19 519 aaPredicted RBP7.5□□□□□ -1.21
RNU6-249P-201ENST00000363016 CWC22Q9HCG8 908 aaKnown RBP7.5□□□□□ -1.21
RNU6-249P-201ENST00000363016 BRPF3Q9ULD4 1205 aa7.5□□□□□ -1.21
RNU6-249P-201ENST00000363016 FOXD4L5Q5VV16 416 aaPredicted RBP7.49□□□□□ -1.21
RNU6-249P-201ENST00000363016 FOXD4L4Q8WXT5 416 aaPredicted RBP7.49□□□□□ -1.21
RNU6-249P-201ENST00000363016 ECM2O94769 699 aaPredicted RBP7.48□□□□□ -1.21
RNU6-249P-201ENST00000363016 AEBP1Q8IUX7 1158 aa7.48□□□□□ -1.21
RNU6-249P-201ENST00000363016 ARID3CA6NKF2 412 aa7.47□□□□□ -1.21
RNU6-249P-201ENST00000363016 MFAP1P55081 439 aaKnown RBP7.47□□□□□ -1.21
RNU6-249P-201ENST00000363016 AAMPQ13685 434 aa7.47□□□□□ -1.21
RNU6-249P-201ENST00000363016 IFNLR1Q8IU57 520 aaPredicted RBP7.47□□□□□ -1.21
RNU6-249P-201ENST00000363016 ZNF428Q96B54 188 aa7.47□□□□□ -1.21
RNU6-249P-201ENST00000363016 TRAIPQ9BWF2 469 aa7.47□□□□□ -1.21
RNU6-249P-201ENST00000363016 GLIPR1L2Q4G1C9 344 aa7.46□□□□□ -1.22
RNU6-249P-201ENST00000363016 PLCD4Q9BRC7 762 aa7.46□□□□□ -1.22
RNU6-249P-201ENST00000363016 CANXP27824 592 aaKnown RBP7.45□□□□□ -1.22
RNU6-249P-201ENST00000363016 IRX6P78412 446 aaPredicted RBP7.44□□□□□ -1.22
RNU6-249P-201ENST00000363016 ERICH6BQ5W0A0 696 aa7.44□□□□□ -1.22
RNU6-249P-201ENST00000363016 LMOD2Q6P5Q4 547 aa7.44□□□□□ -1.22
RNU6-249P-201ENST00000363016 TEX2Q8IWB9 1127 aa7.43□□□□□ -1.22
RNU6-249P-201ENST00000363016 ZNF526Q8TF50 670 aaPredicted RBP7.41□□□□□ -1.22
RNU6-249P-201ENST00000363016 GZF1Q9H116 711 aaPredicted RBP7.41□□□□□ -1.22
RNU6-249P-201ENST00000363016 CCDC27Q2M243 656 aa7.4□□□□□ -1.22
RNU6-249P-201ENST00000363016 TMED8Q6PL24 325 aaPredicted RBP7.39□□□□□ -1.23
RNU6-249P-201ENST00000363016 CCDC125Q86Z20 511 aa7.39□□□□□ -1.23
RNU6-249P-201ENST00000363016 ANP32EQ9BTT0 268 aa7.39□□□□□ -1.23
RNU6-249P-201ENST00000363016 PRDM16Q9HAZ2 1276 aa7.38□□□□□ -1.23
RNU6-249P-201ENST00000363016 ANO8Q9HCE9 1232 aaPredicted RBP7.38□□□□□ -1.23
RNU6-249P-201ENST00000363016 CHGAP10645 457 aaKnown RBP7.37□□□□□ -1.23
RNU6-249P-201ENST00000363016 DNAJC5BQ9UF47 199 aa7.37□□□□□ -1.23
RNU6-249P-201ENST00000363016 MAFGO15525 162 aa7.36□□□□□ -1.23
RNU6-249P-201ENST00000363016 NEFMP07197 916 aa7.36□□□□□ -1.23
RNU6-249P-201ENST00000363016 MCCP23508 829 aa7.36□□□□□ -1.23
RNU6-249P-201ENST00000363016 CCDC82Q8N4S0 544 aa7.35□□□□□ -1.23
RNU6-249P-201ENST00000363016 PTMAP06454 111 aaKnown RBP7.34□□□□□ -1.23
RNU6-249P-201ENST00000363016 ANAPC15P60006 121 aa7.34□□□□□ -1.23
RNU6-249P-201ENST00000363016 WDR70Q9NW82 654 aa7.34□□□□□ -1.23
RNU6-249P-201ENST00000363016 FBXW7Q969H0 707 aa7.33□□□□□ -1.24
RNU6-249P-201ENST00000363016 HSP90AB4PQ58FF6 505 aa7.32□□□□□ -1.24
RNU6-249P-201ENST00000363016 P3H3Q8IVL6 736 aa7.32□□□□□ -1.24
RNU6-249P-201ENST00000363016 CNPY4Q8N129 248 aa7.32□□□□□ -1.24
RNU6-249P-201ENST00000363016 MYT1LQ9UL68 1186 aa7.32□□□□□ -1.24
RNU6-249P-201ENST00000363016 RGL2O15211 777 aa7.31□□□□□ -1.24
RNU6-249P-201ENST00000363016 KDM4AO75164 1064 aa7.31□□□□□ -1.24
RNU6-249P-201ENST00000363016 EXOC8Q8IYI6 725 aa7.31□□□□□ -1.24
RNU6-249P-201ENST00000363016 ANKRD13AQ8IZ07 590 aa7.31□□□□□ -1.24
RNU6-249P-201ENST00000363016 SLC24A3Q9HC58 644 aa7.31□□□□□ -1.24
RNU6-249P-201ENST00000363016 RBM10P98175 930 aaKnown RBP7.3□□□□□ -1.24
RNU6-249P-201ENST00000363016 GRIPAP1Q4V328 841 aa7.3□□□□□ -1.24
RNU6-249P-201ENST00000363016 GPATCH11Q8N954 259 aa7.3□□□□□ -1.24
RNU6-249P-201ENST00000363016 YTHDC1Q96MU7 727 aaKnown RBP7.3□□□□□ -1.24
RNU6-249P-201ENST00000363016 DNAJC2Q99543 621 aaKnown RBP7.3□□□□□ -1.24
RNU6-249P-201ENST00000363016 PRDM10Q9NQV6 1147 aa7.3□□□□□ -1.24
RNU6-249P-201ENST00000363016 PLEKHD1A6NEE1 506 aa7.28□□□□□ -1.24
RNU6-249P-201ENST00000363016 ZC3H15Q8WU90 426 aaKnown RBP7.28□□□□□ -1.24
RNU6-249P-201ENST00000363016 ZNF316A6NFI3 1004 aaPredicted RBP7.27□□□□□ -1.25
RNU6-249P-201ENST00000363016 NOL8Q76FK4 1167 aaKnown RBP7.27□□□□□ -1.25
RNU6-249P-201ENST00000363016 AMOTL2Q9Y2J4 779 aa7.26□□□□□ -1.25
RNU6-249P-201ENST00000363016 CADPSQ9ULU8 1353 aa7.25□□□□□ -1.25
RNU6-249P-201ENST00000363016 HMGB1P1B2RPK0 211 aaPredicted RBP7.25□□□□□ -1.25
RNU6-249P-201ENST00000363016 MYCNP04198 464 aaPredicted RBP7.25□□□□□ -1.25
RNU6-249P-201ENST00000363016 CHRM1P11229 460 aaPredicted RBP7.25□□□□□ -1.25
RNU6-249P-201ENST00000363016 FLIIQ13045 1269 aa7.25□□□□□ -1.25
RNU6-249P-201ENST00000363016 SPOCK2Q92563 424 aa7.25□□□□□ -1.25
RNU6-249P-201ENST00000363016 MYH16Q9H6N6 1097 aa7.25□□□□□ -1.25
RNU6-249P-201ENST00000363016 SCAF1Q9H7N4 1312 aaKnown RBP7.25□□□□□ -1.25
RNU6-249P-201ENST00000363016 LOC102724159A0A0B4J2E5 919 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms