RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 PPP1R15AO75807 674 aaPredicted RBP10.32□□□□□ -0.76
ATP2B4-201ENST00000341360 TMC1Q8TDI8 760 aa10.32□□□□□ -0.76
ATP2B4-201ENST00000341360 CECR2Q9BXF3 1484 aa10.31□□□□□ -0.76
ATP2B4-201ENST00000341360 MROH2BQ7Z745 1585 aa10.31□□□□□ -0.76
ATP2B4-201ENST00000341360 EIF4G2P78344 907 aaKnown RBP eCLIP10.3□□□□□ -0.76
ATP2B4-201ENST00000341360 CFDP1Q9UEE9 299 aaPredicted RBP10.29□□□□□ -0.76
ATP2B4-201ENST00000341360 ANP32BQ92688 251 aaKnown RBP10.28□□□□□ -0.76
ATP2B4-201ENST00000341360 CHIC2Q9UKJ5 165 aa10.28□□□□□ -0.76
ATP2B4-201ENST00000341360 HDGFP51858 240 aaKnown RBP10.28□□□□□ -0.76
ATP2B4-201ENST00000341360 SMARCA2P51531 1590 aa10.27□□□□□ -0.76
ATP2B4-201ENST00000341360 CFAP53Q96M91 514 aa10.27□□□□□ -0.77
ATP2B4-201ENST00000341360 PDS5BQ9NTI5 1447 aa10.27□□□□□ -0.77
ATP2B4-201ENST00000341360 MYH16Q9H6N6 1097 aa10.26□□□□□ -0.77
ATP2B4-201ENST00000341360 TOP2AP11388 1531 aaKnown RBP10.24□□□□□ -0.77
ATP2B4-201ENST00000341360 HSP90AA1P07900 732 aaKnown RBP10.24□□□□□ -0.77
ATP2B4-201ENST00000341360 HNRNPUQ00839 825 aaKnown RBP eCLIP10.23□□□□□ -0.77
ATP2B4-201ENST00000341360 KANK1Q14678 1352 aa10.23□□□□□ -0.77
ATP2B4-201ENST00000341360 CARMIL2Q6F5E8 1435 aa10.23□□□□□ -0.77
ATP2B4-201ENST00000341360 KCNH8Q96L42 1107 aa10.22□□□□□ -0.77
ATP2B4-201ENST00000341360 TIMELESSQ9UNS1 1208 aa10.22□□□□□ -0.77
ATP2B4-201ENST00000341360 WIZO95785 1651 aa10.22□□□□□ -0.77
ATP2B4-201ENST00000341360 VPS8Q8N3P4 1428 aa10.22□□□□□ -0.77
ATP2B4-201ENST00000341360 ANP32EQ9BTT0 268 aa10.2□□□□□ -0.78
ATP2B4-201ENST00000341360 CHMP4BQ9H444 224 aaKnown RBP10.2□□□□□ -0.78
ATP2B4-201ENST00000341360 CCNB3Q8WWL7 1395 aa10.2□□□□□ -0.78
ATP2B4-201ENST00000341360 SOGA1O94964 1423 aa10.2□□□□□ -0.78
ATP2B4-201ENST00000341360 MRS2Q9HD23 443 aa10.2□□□□□ -0.78
ATP2B4-201ENST00000341360 C14orf37Q86TY3 774 aa10.19□□□□□ -0.78
ATP2B4-201ENST00000341360 CCDC88BA6NC98 1476 aa10.19□□□□□ -0.78
ATP2B4-201ENST00000341360 ARID4BQ4LE39 1312 aaPredicted RBP10.19□□□□□ -0.78
ATP2B4-201ENST00000341360 DDX10Q13206 875 aaKnown RBP10.19□□□□□ -0.78
ATP2B4-201ENST00000341360 KDM2AQ9Y2K7 1162 aa10.19□□□□□ -0.78
ATP2B4-201ENST00000341360 CARMIL1Q5VZK9 1371 aa10.19□□□□□ -0.78
ATP2B4-201ENST00000341360 PNNQ9H307 717 aaKnown RBP10.18□□□□□ -0.78
ATP2B4-201ENST00000341360 AEBP2Q6ZN18 517 aaPredicted RBP10.18□□□□□ -0.78
ATP2B4-201ENST00000341360 SUPT16HQ9Y5B9 1047 aaKnown RBP10.18□□□□□ -0.78
ATP2B4-201ENST00000341360 FKBP8Q14318 412 aa10.17□□□□□ -0.78
ATP2B4-201ENST00000341360 FAM9BQ8IZU0 186 aa10.17□□□□□ -0.78
ATP2B4-201ENST00000341360 NUDCQ9Y266 331 aa10.17□□□□□ -0.78
ATP2B4-201ENST00000341360 RRP7BPQ9NSQ0 103 aa10.16□□□□□ -0.78
ATP2B4-201ENST00000341360 KNSTRNQ9Y448 316 aa10.16□□□□□ -0.78
ATP2B4-201ENST00000341360 ABCC8Q09428 1581 aa10.16□□□□□ -0.78
ATP2B4-201ENST00000341360 CCDC136Q96JN2 1154 aa10.15□□□□□ -0.78
ATP2B4-201ENST00000341360 CUX2O14529 1486 aa10.15□□□□□ -0.78
ATP2B4-201ENST00000341360 MS4A1P11836 297 aa10.15□□□□□ -0.79
ATP2B4-201ENST00000341360 HAP1P54257 671 aaPredicted RBP10.15□□□□□ -0.79
ATP2B4-201ENST00000341360 FMN1Q68DA7 1419 aa10.12□□□□□ -0.79
ATP2B4-201ENST00000341360 BCL11AQ9H165 835 aa10.12□□□□□ -0.79
ATP2B4-201ENST00000341360 RSPH4AQ5TD94 716 aa10.12□□□□□ -0.79
ATP2B4-201ENST00000341360 POGKQ9P215 609 aa10.11□□□□□ -0.79
ATP2B4-201ENST00000341360 CHMP4AQ9BY43 222 aa10.1□□□□□ -0.79
ATP2B4-201ENST00000341360 CARD11Q9BXL7 1154 aa10.1□□□□□ -0.79
ATP2B4-201ENST00000341360 MAPK8IP3Q9UPT6 1336 aa10.1□□□□□ -0.79
ATP2B4-201ENST00000341360 SMARCA4P51532 1647 aa10.09□□□□□ -0.79
ATP2B4-201ENST00000341360 EFCAB2Q5VUJ9 269 aa10.08□□□□□ -0.8
ATP2B4-201ENST00000341360 BECN1Q14457 450 aa10.07□□□□□ -0.8
ATP2B4-201ENST00000341360 CASC1Q6TDU7 716 aa10.07□□□□□ -0.8
ATP2B4-201ENST00000341360 DDRGK1Q96HY6 314 aa10.07□□□□□ -0.8
ATP2B4-201ENST00000341360 CCER2I3L3R5 266 aa10.06□□□□□ -0.8
ATP2B4-201ENST00000341360 TMF1P82094 1093 aa10.06□□□□□ -0.8
ATP2B4-201ENST00000341360 RGL3Q3MIN7 710 aa10.06□□□□□ -0.8
ATP2B4-201ENST00000341360 CFAP44Q96MT7 982 aa10.06□□□□□ -0.8
ATP2B4-201ENST00000341360 CDK11BP21127 795 aaKnown RBP10.06□□□□□ -0.8
ATP2B4-201ENST00000341360 ARHGAP35Q9NRY4 1499 aa10.05□□□□□ -0.8
ATP2B4-201ENST00000341360 EIF4G1Q04637 1599 aaKnown RBP10.05□□□□□ -0.8
ATP2B4-201ENST00000341360 CADPSQ9ULU8 1353 aa10.05□□□□□ -0.8
ATP2B4-201ENST00000341360 KIF21BO75037 1637 aa10.04□□□□□ -0.8
ATP2B4-201ENST00000341360 GOLGA6L22H0YM25 854 aa10.03□□□□□ -0.8
ATP2B4-201ENST00000341360 NCLP19338 710 aaKnown RBP10.03□□□□□ -0.8
ATP2B4-201ENST00000341360 DHX57Q6P158 1386 aaKnown RBP10.02□□□□□ -0.81
ATP2B4-201ENST00000341360 A0A0G2JS52 829 aa10.02□□□□□ -0.81
ATP2B4-201ENST00000341360 TSHZ2Q9NRE2 1034 aa10.02□□□□□ -0.81
ATP2B4-201ENST00000341360 ANKRD30AQ9BXX3 1397 aa10.02□□□□□ -0.81
ATP2B4-201ENST00000341360 ERICH6BQ5W0A0 696 aa10.01□□□□□ -0.81
ATP2B4-201ENST00000341360 SALL2Q9Y467 1007 aaPredicted RBP10.01□□□□□ -0.81
ATP2B4-201ENST00000341360 ZBTB7CA1YPR0 619 aa10□□□□□ -0.81
ATP2B4-201ENST00000341360 FTSJ3Q8IY81 847 aaKnown RBP10□□□□□ -0.81
ATP2B4-201ENST00000341360 CALD1Q05682 793 aaKnown RBP9.99□□□□□ -0.81
ATP2B4-201ENST00000341360 SETD5Q9C0A6 1442 aa9.99□□□□□ -0.81
ATP2B4-201ENST00000341360 EIF3AQ14152 1382 aaKnown RBP9.98□□□□□ -0.81
ATP2B4-201ENST00000341360 CCDC18Q5T9S5 1454 aa9.98□□□□□ -0.81
ATP2B4-201ENST00000341360 HDGFL2Q7Z4V5 671 aaPredicted RBP9.97□□□□□ -0.81
ATP2B4-201ENST00000341360 RUSC2Q8N2Y8 1516 aa9.97□□□□□ -0.81
ATP2B4-201ENST00000341360 HDAC5Q9UQL6 1122 aa9.97□□□□□ -0.81
ATP2B4-201ENST00000341360 RAPGEF2Q9Y4G8 1499 aa9.97□□□□□ -0.81
ATP2B4-201ENST00000341360 ZRSR1Q15695 479 aaKnown RBP9.95□□□□□ -0.82
ATP2B4-201ENST00000341360 RBM19Q9Y4C8 960 aaKnown RBP9.94□□□□□ -0.82
ATP2B4-201ENST00000341360 PPM1GO15355 546 aaPredicted RBP9.94□□□□□ -0.82
ATP2B4-201ENST00000341360 LMOD2Q6P5Q4 547 aa9.93□□□□□ -0.82
ATP2B4-201ENST00000341360 DCAF11Q8TEB1 546 aa9.93□□□□□ -0.82
ATP2B4-201ENST00000341360 RAB3GAP2Q9H2M9 1393 aa9.93□□□□□ -0.82
ATP2B4-201ENST00000341360 ATAD2BQ9ULI0 1458 aa9.92□□□□□ -0.82
ATP2B4-201ENST00000341360 PPP4R2Q9NY27 417 aa9.92□□□□□ -0.82
ATP2B4-201ENST00000341360 EID1Q9Y6B2 187 aa9.92□□□□□ -0.82
ATP2B4-201ENST00000341360 OSCARQ8IYS5 282 aa9.92□□□□□ -0.82
ATP2B4-201ENST00000341360 ERICH3Q5RHP9 1530 aa9.92□□□□□ -0.82
ATP2B4-201ENST00000341360 SRPK2P78362 688 aaKnown RBP9.92□□□□□ -0.82
ATP2B4-201ENST00000341360 UACAQ9BZF9 1416 aa9.92□□□□□ -0.82
ATP2B4-201ENST00000341360 TDRD9Q8NDG6 1382 aaKnown RBP9.91□□□□□ -0.82
ATP2B4-201ENST00000341360 NPHP1O15259 732 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms