RNA–Protein interactions for RNA: ENST00000338797.10

CRTC1-202, Transcript of CREB regulated transcription coactivator 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CRTC1, Length 6,929 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC1-202ENST00000338797 CDK11BP21127 795 aaKnown RBP18.68■□□□□ 0.58
CRTC1-202ENST00000338797 NPHP1O15259 732 aa18.67■□□□□ 0.58
CRTC1-202ENST00000338797 IRX6P78412 446 aaPredicted RBP18.65■□□□□ 0.58
CRTC1-202ENST00000338797 TRHP20396 242 aaPredicted RBP18.65■□□□□ 0.58
CRTC1-202ENST00000338797 NBR1Q14596 966 aa18.63■□□□□ 0.57
CRTC1-202ENST00000338797 TSPY4P0CV99 314 aa18.62■□□□□ 0.57
CRTC1-202ENST00000338797 TSPY10P0CW01 314 aa18.62■□□□□ 0.57
CRTC1-202ENST00000338797 RGL3Q3MIN7 710 aa18.61■□□□□ 0.57
CRTC1-202ENST00000338797 NCBP3Q53F19 620 aaKnown RBP18.59■□□□□ 0.57
CRTC1-202ENST00000338797 MYH16Q9H6N6 1097 aa18.58■□□□□ 0.56
CRTC1-202ENST00000338797 RRP7BPQ9NSQ0 103 aa18.57■□□□□ 0.56
CRTC1-202ENST00000338797 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.57■□□□□ 0.56
CRTC1-202ENST00000338797 LAS1LQ9Y4W2 734 aaKnown RBP18.55■□□□□ 0.56
CRTC1-202ENST00000338797 CCDC136Q96JN2 1154 aa18.53■□□□□ 0.56
CRTC1-202ENST00000338797 MRS2Q9HD23 443 aa18.48■□□□□ 0.55
CRTC1-202ENST00000338797 MLECQ14165 292 aa18.48■□□□□ 0.55
CRTC1-202ENST00000338797 SOX12O15370 315 aa18.46■□□□□ 0.55
CRTC1-202ENST00000338797 TNNT2P45379 298 aaPredicted RBP18.45■□□□□ 0.54
CRTC1-202ENST00000338797 MTUS2Q5JR59 1369 aa18.45■□□□□ 0.54
CRTC1-202ENST00000338797 NEUROD2Q15784 382 aa18.44■□□□□ 0.54
CRTC1-202ENST00000338797 ACIN1Q9UKV3 1341 aaKnown RBP18.39■□□□□ 0.53
CRTC1-202ENST00000338797 NCLP19338 710 aaKnown RBP18.38■□□□□ 0.53
CRTC1-202ENST00000338797 POGKQ9P215 609 aa18.34■□□□□ 0.53
CRTC1-202ENST00000338797 NAP1L2Q9ULW6 460 aaPredicted RBP18.33■□□□□ 0.52
CRTC1-202ENST00000338797 CLSTN1O94985 981 aa18.32■□□□□ 0.52
CRTC1-202ENST00000338797 PLEKHD1A6NEE1 506 aa18.32■□□□□ 0.52
CRTC1-202ENST00000338797 ISY1Q9ULR0 285 aaKnown RBP18.3■□□□□ 0.52
CRTC1-202ENST00000338797 GOLGA2Q08379 1002 aa18.28■□□□□ 0.52
CRTC1-202ENST00000338797 AMER1Q5JTC6 1135 aaPredicted RBP18.27■□□□□ 0.52
CRTC1-202ENST00000338797 SAFB2Q14151 953 aaKnown RBP eCLIP18.27■□□□□ 0.52
CRTC1-202ENST00000338797 OS9Q13438 667 aaPredicted RBP18.26■□□□□ 0.51
CRTC1-202ENST00000338797 FTSJ3Q8IY81 847 aaKnown RBP18.26■□□□□ 0.51
CRTC1-202ENST00000338797 ERCC6Q03468 1493 aa18.25■□□□□ 0.51
CRTC1-202ENST00000338797 ZRSR1Q15695 479 aaKnown RBP18.24■□□□□ 0.51
CRTC1-202ENST00000338797 CFAP53Q96M91 514 aa18.23■□□□□ 0.51
CRTC1-202ENST00000338797 U2SURPO15042 1029 aaKnown RBP18.22■□□□□ 0.51
CRTC1-202ENST00000338797 CC2D1BQ5T0F9 858 aaKnown RBP18.21■□□□□ 0.51
CRTC1-202ENST00000338797 KNSTRNQ9Y448 316 aa18.21■□□□□ 0.51
CRTC1-202ENST00000338797 EIF4G2P78344 907 aaKnown RBP eCLIP18.21■□□□□ 0.518e-8■■■■■ 50.7
CRTC1-202ENST00000338797 ZNF330Q9Y3S2 320 aaPredicted RBP18.2■□□□□ 0.5
CRTC1-202ENST00000338797 FRAT1Q92837 279 aaPredicted RBP18.19■□□□□ 0.5
CRTC1-202ENST00000338797 MAPK8IP3Q9UPT6 1336 aa18.19■□□□□ 0.5
CRTC1-202ENST00000338797 CCDC9Q9Y3X0 531 aaKnown RBP18.18■□□□□ 0.5
CRTC1-202ENST00000338797 PLCB2Q00722 1185 aa18.18■□□□□ 0.5
CRTC1-202ENST00000338797 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.18■□□□□ 0.5
CRTC1-202ENST00000338797 CASC1Q6TDU7 716 aa18.17■□□□□ 0.5
CRTC1-202ENST00000338797 CFDP1Q9UEE9 299 aaPredicted RBP18.17■□□□□ 0.5
CRTC1-202ENST00000338797 FGD1P98174 961 aa18.16■□□□□ 0.5
CRTC1-202ENST00000338797 PAK3O75914 559 aaPredicted RBP18.15■□□□□ 0.5
CRTC1-202ENST00000338797 CARD11Q9BXL7 1154 aa18.15■□□□□ 0.5
CRTC1-202ENST00000338797 PTMAP06454 111 aaKnown RBP18.14■□□□□ 0.49
CRTC1-202ENST00000338797 STK26Q9P289 416 aa18.13■□□□□ 0.49
CRTC1-202ENST00000338797 KCNJ4P48050 445 aa18.12■□□□□ 0.49
CRTC1-202ENST00000338797 ZCCHC6Q5VYS8 1495 aaKnown RBP18.12■□□□□ 0.49
CRTC1-202ENST00000338797 MIER1Q8N108 512 aa18.11■□□□□ 0.49
CRTC1-202ENST00000338797 TRIM44Q96DX7 344 aaPredicted RBP18.1■□□□□ 0.49
CRTC1-202ENST00000338797 BECN1Q14457 450 aa18.09■□□□□ 0.49
CRTC1-202ENST00000338797 DNTTIP2Q5QJE6 756 aaKnown RBP18.09■□□□□ 0.49
CRTC1-202ENST00000338797 SRPK2P78362 688 aaKnown RBP18.08■□□□□ 0.49
CRTC1-202ENST00000338797 RGS3P49796 1198 aa18.08■□□□□ 0.48
CRTC1-202ENST00000338797 GOLGA6L22H0YM25 854 aa18.05■□□□□ 0.48
CRTC1-202ENST00000338797 CSB-PGBD3P0DP91 1061 aa18.05■□□□□ 0.48
CRTC1-202ENST00000338797 NUDCQ9Y266 331 aa18.04■□□□□ 0.48
CRTC1-202ENST00000338797 EIF4G1Q04637 1599 aaKnown RBP18.04■□□□□ 0.48
CRTC1-202ENST00000338797 APBB1O00213 710 aa18.03■□□□□ 0.48
CRTC1-202ENST00000338797 GGT6Q6P531 493 aa18.03■□□□□ 0.48
CRTC1-202ENST00000338797 GLIPR1L2Q4G1C9 344 aa18.02■□□□□ 0.48
CRTC1-202ENST00000338797 CLIP1P30622 1438 aa18■□□□□ 0.47
CRTC1-202ENST00000338797 SPRYD3Q8NCJ5 442 aa18■□□□□ 0.47
CRTC1-202ENST00000338797 CDCA8Q53HL2 280 aa17.99■□□□□ 0.47
CRTC1-202ENST00000338797 ANO8Q9HCE9 1232 aaPredicted RBP17.99■□□□□ 0.47
CRTC1-202ENST00000338797 SUPT16HQ9Y5B9 1047 aaKnown RBP17.98■□□□□ 0.47
CRTC1-202ENST00000338797 RSF1Q96T23 1441 aaPredicted RBP17.97■□□□□ 0.47
CRTC1-202ENST00000338797 DDRGK1Q96HY6 314 aa17.96■□□□□ 0.47
CRTC1-202ENST00000338797 HSP90AB1P08238 724 aaKnown RBP17.96■□□□□ 0.47
CRTC1-202ENST00000338797 NUTM2DQ5VT03 806 aaPredicted RBP17.95■□□□□ 0.46
CRTC1-202ENST00000338797 SIN3AQ96ST3 1273 aa17.95■□□□□ 0.46
CRTC1-202ENST00000338797 DCAF11Q8TEB1 546 aa17.95■□□□□ 0.46
CRTC1-202ENST00000338797 PDE4CQ08493 712 aa17.93■□□□□ 0.46
CRTC1-202ENST00000338797 PRM3Q9NNZ6 103 aa17.93■□□□□ 0.46
CRTC1-202ENST00000338797 RTF1Q92541 710 aaKnown RBP17.92■□□□□ 0.46
CRTC1-202ENST00000338797 CHMP3Q9Y3E7 222 aa17.91■□□□□ 0.46
CRTC1-202ENST00000338797 NUTM2FA1L443 756 aa17.89■□□□□ 0.46
CRTC1-202ENST00000338797 G3V3G9 751 aa17.89■□□□□ 0.46
CRTC1-202ENST00000338797 DCAF8Q5TAQ9 597 aa17.89■□□□□ 0.46
CRTC1-202ENST00000338797 TMX4Q9H1E5 349 aaPredicted RBP17.89■□□□□ 0.45
CRTC1-202ENST00000338797 GNL2Q13823 731 aaKnown RBP17.88■□□□□ 0.45
CRTC1-202ENST00000338797 ERICH6BQ5W0A0 696 aa17.88■□□□□ 0.45
CRTC1-202ENST00000338797 RTN4Q9NQC3 1192 aaKnown RBP17.87■□□□□ 0.45
CRTC1-202ENST00000338797 KANK1Q14678 1352 aa17.86■□□□□ 0.45
CRTC1-202ENST00000338797 HDGFP51858 240 aaKnown RBP17.86■□□□□ 0.45
CRTC1-202ENST00000338797 MORC1Q86VD1 984 aa17.86■□□□□ 0.45
CRTC1-202ENST00000338797 GOLGA6L4A6NEF3 574 aa17.84■□□□□ 0.45
CRTC1-202ENST00000338797 FOXD1Q16676 465 aa17.83■□□□□ 0.44
CRTC1-202ENST00000338797 MSH5O43196 834 aa17.83■□□□□ 0.44
CRTC1-202ENST00000338797 AEBP2Q6ZN18 517 aaPredicted RBP17.82■□□□□ 0.44
CRTC1-202ENST00000338797 LTV1Q96GA3 475 aaPredicted RBP17.82■□□□□ 0.44
CRTC1-202ENST00000338797 B4GALNT3Q6L9W6 998 aa17.81■□□□□ 0.44
CRTC1-202ENST00000338797 PNNQ9H307 717 aaKnown RBP17.8■□□□□ 0.44
CRTC1-202ENST00000338797 TMF1P82094 1093 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms