RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 RRP7BPQ9NSQ0 103 aa18.68■□□□□ 0.58
EDEM3-201ENST00000318130 TMC1Q8TDI8 760 aa18.68■□□□□ 0.58
EDEM3-201ENST00000318130 HSP90AA1P07900 732 aaKnown RBP18.67■□□□□ 0.58
EDEM3-201ENST00000318130 TAOK2Q9UL54 1235 aa18.66■□□□□ 0.58
EDEM3-201ENST00000318130 NPHP1O15259 732 aa18.65■□□□□ 0.58
EDEM3-201ENST00000318130 CCDC136Q96JN2 1154 aa18.63■□□□□ 0.57
EDEM3-201ENST00000318130 SOX12O15370 315 aa18.62■□□□□ 0.57
EDEM3-201ENST00000318130 UPF2Q9HAU5 1272 aaKnown RBP18.62■□□□□ 0.57
EDEM3-201ENST00000318130 TSPY4P0CV99 314 aa18.61■□□□□ 0.57
EDEM3-201ENST00000318130 TSPY10P0CW01 314 aa18.61■□□□□ 0.57
EDEM3-201ENST00000318130 MIER1Q8N108 512 aa18.59■□□□□ 0.57
EDEM3-201ENST00000318130 DCAF1Q9Y4B6 1507 aa18.58■□□□□ 0.56
EDEM3-201ENST00000318130 TONSLQ96HA7 1378 aa18.58■□□□□ 0.56
EDEM3-201ENST00000318130 IRX6P78412 446 aaPredicted RBP18.57■□□□□ 0.56
EDEM3-201ENST00000318130 TPRNQ4KMQ1 711 aa18.52■□□□□ 0.56
EDEM3-201ENST00000318130 TNNT2P45379 298 aaPredicted RBP18.5■□□□□ 0.55
EDEM3-201ENST00000318130 MTUS2Q5JR59 1369 aa18.49■□□□□ 0.55
EDEM3-201ENST00000318130 ANP32EQ9BTT0 268 aa18.49■□□□□ 0.55
EDEM3-201ENST00000318130 LAS1LQ9Y4W2 734 aaKnown RBP18.49■□□□□ 0.55
EDEM3-201ENST00000318130 WDR43Q15061 677 aaKnown RBP eCLIP18.48■□□□□ 0.55
EDEM3-201ENST00000318130 EIF4G1Q04637 1599 aaKnown RBP18.46■□□□□ 0.54
EDEM3-201ENST00000318130 SAFB2Q14151 953 aaKnown RBP eCLIP18.45■□□□□ 0.54
EDEM3-201ENST00000318130 AEBP2Q6ZN18 517 aaPredicted RBP18.44■□□□□ 0.54
EDEM3-201ENST00000318130 PLEKHD1A6NEE1 506 aa18.44■□□□□ 0.54
EDEM3-201ENST00000318130 MRS2Q9HD23 443 aa18.43■□□□□ 0.54
EDEM3-201ENST00000318130 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.41■□□□□ 0.54
EDEM3-201ENST00000318130 NCBP3Q53F19 620 aaKnown RBP18.39■□□□□ 0.53
EDEM3-201ENST00000318130 RB1CC1Q8TDY2 1594 aa18.38■□□□□ 0.53
EDEM3-201ENST00000318130 CCDC9Q9Y3X0 531 aaKnown RBP18.38■□□□□ 0.53
EDEM3-201ENST00000318130 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.38■□□□□ 0.53
EDEM3-201ENST00000318130 NEUROD2Q15784 382 aa18.35■□□□□ 0.53
EDEM3-201ENST00000318130 POGKQ9P215 609 aa18.35■□□□□ 0.53
EDEM3-201ENST00000318130 STK26Q9P289 416 aa18.3■□□□□ 0.52
EDEM3-201ENST00000318130 PAK3O75914 559 aaPredicted RBP18.29■□□□□ 0.52
EDEM3-201ENST00000318130 DDRGK1Q96HY6 314 aa18.29■□□□□ 0.52
EDEM3-201ENST00000318130 NUTM2DQ5VT03 806 aaPredicted RBP18.27■□□□□ 0.52
EDEM3-201ENST00000318130 CFDP1Q9UEE9 299 aaPredicted RBP18.27■□□□□ 0.52
EDEM3-201ENST00000318130 AMER1Q5JTC6 1135 aaPredicted RBP18.27■□□□□ 0.52
EDEM3-201ENST00000318130 RTN4Q9NQC3 1192 aaKnown RBP18.27■□□□□ 0.52
EDEM3-201ENST00000318130 TRIM44Q96DX7 344 aaPredicted RBP18.26■□□□□ 0.51
EDEM3-201ENST00000318130 GGT6Q6P531 493 aa18.26■□□□□ 0.51
EDEM3-201ENST00000318130 ZCCHC6Q5VYS8 1495 aaKnown RBP18.25■□□□□ 0.51
EDEM3-201ENST00000318130 ZNF330Q9Y3S2 320 aaPredicted RBP18.25■□□□□ 0.51
EDEM3-201ENST00000318130 BAZ1BQ9UIG0 1483 aaKnown RBP18.25■□□□□ 0.51
EDEM3-201ENST00000318130 BECN1Q14457 450 aa18.22■□□□□ 0.51
EDEM3-201ENST00000318130 MYH16Q9H6N6 1097 aa18.2■□□□□ 0.5
EDEM3-201ENST00000318130 SUPT16HQ9Y5B9 1047 aaKnown RBP18.19■□□□□ 0.5
EDEM3-201ENST00000318130 CC2D1BQ5T0F9 858 aaKnown RBP18.18■□□□□ 0.5
EDEM3-201ENST00000318130 ISY1Q9ULR0 285 aaKnown RBP18.16■□□□□ 0.5
EDEM3-201ENST00000318130 NUTM2FA1L443 756 aa18.15■□□□□ 0.5
EDEM3-201ENST00000318130 U2SURPO15042 1029 aaKnown RBP18.14■□□□□ 0.5
EDEM3-201ENST00000318130 ERICH6BQ5W0A0 696 aa18.13■□□□□ 0.49
EDEM3-201ENST00000318130 EIF4G2P78344 907 aaKnown RBP eCLIP18.13■□□□□ 0.49
EDEM3-201ENST00000318130 NAP1L5Q96NT1 182 aaPredicted RBP18.12■□□□□ 0.49
EDEM3-201ENST00000318130 PHF23Q9BUL5 403 aaPredicted RBP18.12■□□□□ 0.49
EDEM3-201ENST00000318130 CSB-PGBD3P0DP91 1061 aa18.11■□□□□ 0.49
EDEM3-201ENST00000318130 NOP58Q9Y2X3 529 aaKnown RBP18.11■□□□□ 0.49
EDEM3-201ENST00000318130 SRPK2P78362 688 aaKnown RBP18.11■□□□□ 0.49
EDEM3-201ENST00000318130 NCLP19338 710 aaKnown RBP18.1■□□□□ 0.49
EDEM3-201ENST00000318130 GOLGA6L22H0YM25 854 aa18.1■□□□□ 0.49
EDEM3-201ENST00000318130 CDK11BP21127 795 aaKnown RBP18.1■□□□□ 0.49
EDEM3-201ENST00000318130 GOLGA2Q08379 1002 aa18.09■□□□□ 0.49
EDEM3-201ENST00000318130 NAP1L2Q9ULW6 460 aaPredicted RBP18.09■□□□□ 0.49
EDEM3-201ENST00000318130 MYO15BQ96JP2 1530 aa18.07■□□□□ 0.48
EDEM3-201ENST00000318130 CLSTN1O94985 981 aa18.07■□□□□ 0.48
EDEM3-201ENST00000318130 CARD11Q9BXL7 1154 aa18.07■□□□□ 0.48
EDEM3-201ENST00000318130 CYB5RLQ6IPT4 315 aa18.06■□□□□ 0.48
EDEM3-201ENST00000318130 PTMAP06454 111 aaKnown RBP18.06■□□□□ 0.48
EDEM3-201ENST00000318130 OS9Q13438 667 aaPredicted RBP18.05■□□□□ 0.48
EDEM3-201ENST00000318130 CLIP1P30622 1438 aa18.05■□□□□ 0.48
EDEM3-201ENST00000318130 PPP4R2Q9NY27 417 aa18.05■□□□□ 0.48
EDEM3-201ENST00000318130 KNSTRNQ9Y448 316 aa18.04■□□□□ 0.48
EDEM3-201ENST00000318130 CECR2Q9BXF3 1484 aa18.03■□□□□ 0.48
EDEM3-201ENST00000318130 KLHL34Q8N239 644 aa18.03■□□□□ 0.48
EDEM3-201ENST00000318130 FOXD1Q16676 465 aa18.03■□□□□ 0.48
EDEM3-201ENST00000318130 DNTTIP2Q5QJE6 756 aaKnown RBP18.03■□□□□ 0.48
EDEM3-201ENST00000318130 MEX3CQ5U5Q3 659 aaKnown RBP18■□□□□ 0.47
EDEM3-201ENST00000318130 DEKP35659 375 aaKnown RBP18■□□□□ 0.47
EDEM3-201ENST00000318130 CFAP53Q96M91 514 aa17.99■□□□□ 0.47
EDEM3-201ENST00000318130 MSH5O43196 834 aa17.99■□□□□ 0.47
EDEM3-201ENST00000318130 FRAT1Q92837 279 aaPredicted RBP17.99■□□□□ 0.47
EDEM3-201ENST00000318130 MAPK8IP3Q9UPT6 1336 aa17.99■□□□□ 0.47
EDEM3-201ENST00000318130 CCDC180Q9P1Z9 1646 aa17.98■□□□□ 0.47
EDEM3-201ENST00000318130 FTSJ3Q8IY81 847 aaKnown RBP17.97■□□□□ 0.47
EDEM3-201ENST00000318130 DCAF11Q8TEB1 546 aa17.97■□□□□ 0.47
EDEM3-201ENST00000318130 SIN3AQ96ST3 1273 aa17.96■□□□□ 0.47
EDEM3-201ENST00000318130 B4GALNT3Q6L9W6 998 aa17.96■□□□□ 0.47
EDEM3-201ENST00000318130 RSF1Q96T23 1441 aaPredicted RBP17.95■□□□□ 0.46
EDEM3-201ENST00000318130 RGS3P49796 1198 aa17.95■□□□□ 0.46
EDEM3-201ENST00000318130 LTV1Q96GA3 475 aaPredicted RBP17.94■□□□□ 0.46
EDEM3-201ENST00000318130 APBB1O00213 710 aa17.92■□□□□ 0.46
EDEM3-201ENST00000318130 RBM19Q9Y4C8 960 aaKnown RBP17.91■□□□□ 0.46
EDEM3-201ENST00000318130 CCNB3Q8WWL7 1395 aa17.91■□□□□ 0.46
EDEM3-201ENST00000318130 KANK1Q14678 1352 aa17.91■□□□□ 0.46
EDEM3-201ENST00000318130 WRNQ14191 1432 aaPredicted RBP eCLIP17.88■□□□□ 0.459e-6■■■■■ 50.1
EDEM3-201ENST00000318130 ANO8Q9HCE9 1232 aaPredicted RBP17.88■□□□□ 0.45
EDEM3-201ENST00000318130 CUX2O14529 1486 aa17.86■□□□□ 0.45
EDEM3-201ENST00000318130 CEP162Q5TB80 1403 aa17.86■□□□□ 0.45
EDEM3-201ENST00000318130 KIF27Q86VH2 1401 aa17.86■□□□□ 0.45
EDEM3-201ENST00000318130 PLCB2Q00722 1185 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms