RNA–Protein interactions for RNA: ENST00000314138.10

RPL27A-201, Transcript of ribosomal protein L27a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL27A, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL27A-201ENST00000314138 DDX10Q13206 875 aaKnown RBP16.37■□□□□ 0.21
RPL27A-201ENST00000314138 CCDC136Q96JN2 1154 aa16.37■□□□□ 0.21
RPL27A-201ENST00000314138 IRX6P78412 446 aaPredicted RBP16.34■□□□□ 0.21
RPL27A-201ENST00000314138 BAZ1AQ9NRL2 1556 aaPredicted RBP16.33■□□□□ 0.21
RPL27A-201ENST00000314138 MTUS2Q5JR59 1369 aa16.32■□□□□ 0.2
RPL27A-201ENST00000314138 ARXQ96QS3 562 aa16.31■□□□□ 0.2
RPL27A-201ENST00000314138 ERICH6BQ5W0A0 696 aa16.31■□□□□ 0.2
RPL27A-201ENST00000314138 SMARCA2P51531 1590 aa16.29■□□□□ 0.2
RPL27A-201ENST00000314138 A0A0G2JS52 829 aa16.28■□□□□ 0.2
RPL27A-201ENST00000314138 HDGFP51858 240 aaKnown RBP16.27■□□□□ 0.2
RPL27A-201ENST00000314138 KIF27Q86VH2 1401 aa16.27■□□□□ 0.2
RPL27A-201ENST00000314138 RBM19Q9Y4C8 960 aaKnown RBP16.27■□□□□ 0.2
RPL27A-201ENST00000314138 CYB5RLQ6IPT4 315 aa16.26■□□□□ 0.19
RPL27A-201ENST00000314138 NOP58Q9Y2X3 529 aaKnown RBP16.25■□□□□ 0.19
RPL27A-201ENST00000314138 CARMIL2Q6F5E8 1435 aa16.25■□□□□ 0.19
RPL27A-201ENST00000314138 WRNQ14191 1432 aaPredicted RBP eCLIP16.24■□□□□ 0.19
RPL27A-201ENST00000314138 FAM9BQ8IZU0 186 aa16.22■□□□□ 0.19
RPL27A-201ENST00000314138 TSHZ2Q9NRE2 1034 aa16.22■□□□□ 0.19
RPL27A-201ENST00000314138 MLECQ14165 292 aa16.22■□□□□ 0.19
RPL27A-201ENST00000314138 PPM1GO15355 546 aaPredicted RBP16.2■□□□□ 0.18
RPL27A-201ENST00000314138 RSF1Q96T23 1441 aaPredicted RBP16.2■□□□□ 0.18
RPL27A-201ENST00000314138 CANXP27824 592 aaKnown RBP16.19■□□□□ 0.18
RPL27A-201ENST00000314138 MYO15BQ96JP2 1530 aa16.19■□□□□ 0.18
RPL27A-201ENST00000314138 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.18■□□□□ 0.18
RPL27A-201ENST00000314138 NAP1L5Q96NT1 182 aaPredicted RBP16.18■□□□□ 0.18
RPL27A-201ENST00000314138 UPF2Q9HAU5 1272 aaKnown RBP16.18■□□□□ 0.18
RPL27A-201ENST00000314138 CFDP1Q9UEE9 299 aaPredicted RBP16.18■□□□□ 0.18
RPL27A-201ENST00000314138 TNNT2P45379 298 aaPredicted RBP16.16■□□□□ 0.18
RPL27A-201ENST00000314138 DDRGK1Q96HY6 314 aa16.15■□□□□ 0.18
RPL27A-201ENST00000314138 CADPSQ9ULU8 1353 aa16.15■□□□□ 0.18
RPL27A-201ENST00000314138 HSP90AA1P07900 732 aaKnown RBP16.14■□□□□ 0.17
RPL27A-201ENST00000314138 TRIM44Q96DX7 344 aaPredicted RBP16.13■□□□□ 0.17
RPL27A-201ENST00000314138 LAS1LQ9Y4W2 734 aaKnown RBP16.12■□□□□ 0.17
RPL27A-201ENST00000314138 CHIC2Q9UKJ5 165 aa16.11■□□□□ 0.17
RPL27A-201ENST00000314138 SOGA1O94964 1423 aa16.09■□□□□ 0.17
RPL27A-201ENST00000314138 CEP164Q9UPV0 1460 aa16.08■□□□□ 0.16
RPL27A-201ENST00000314138 PPP4R2Q9NY27 417 aa16.06■□□□□ 0.16
RPL27A-201ENST00000314138 EEA1Q15075 1411 aa16.06■□□□□ 0.16
RPL27A-201ENST00000314138 ZBTB7CA1YPR0 619 aa16.06■□□□□ 0.16
RPL27A-201ENST00000314138 PLEKHG5O94827 1062 aa16.05■□□□□ 0.16
RPL27A-201ENST00000314138 PRKCSHP14314 528 aaPredicted RBP16.04■□□□□ 0.16
RPL27A-201ENST00000314138 MRS2Q9HD23 443 aa16.04■□□□□ 0.16
RPL27A-201ENST00000314138 LMOD2Q6P5Q4 547 aa16.03■□□□□ 0.16
RPL27A-201ENST00000314138 CUX2O14529 1486 aa16.03■□□□□ 0.16
RPL27A-201ENST00000314138 TDRD9Q8NDG6 1382 aaKnown RBP16.03■□□□□ 0.16
RPL27A-201ENST00000314138 EFCAB2Q5VUJ9 269 aa16.02■□□□□ 0.16
RPL27A-201ENST00000314138 TONSLQ96HA7 1378 aa16.02■□□□□ 0.16
RPL27A-201ENST00000314138 KANK1Q14678 1352 aa16.02■□□□□ 0.15
RPL27A-201ENST00000314138 EIF4G1Q04637 1599 aaKnown RBP16.01■□□□□ 0.15
RPL27A-201ENST00000314138 CLIP1P30622 1438 aa16.01■□□□□ 0.15
RPL27A-201ENST00000314138 CARMIL1Q5VZK9 1371 aa16■□□□□ 0.15
RPL27A-201ENST00000314138 SALL2Q9Y467 1007 aaPredicted RBP15.99■□□□□ 0.15
RPL27A-201ENST00000314138 BECN1Q14457 450 aa15.98■□□□□ 0.15
RPL27A-201ENST00000314138 ABCC8Q09428 1581 aa15.97■□□□□ 0.15
RPL27A-201ENST00000314138 SENP3Q9H4L4 574 aaPredicted RBP15.97■□□□□ 0.15
RPL27A-201ENST00000314138 HIRIP3Q9BW71 556 aaPredicted RBP15.96■□□□□ 0.14
RPL27A-201ENST00000314138 TMC1Q8TDI8 760 aa15.94■□□□□ 0.14
RPL27A-201ENST00000314138 JPH4Q96JJ6 628 aa15.94■□□□□ 0.14
RPL27A-201ENST00000314138 GGT6Q6P531 493 aa15.94■□□□□ 0.14
RPL27A-201ENST00000314138 B4GALNT3Q6L9W6 998 aa15.93■□□□□ 0.14
RPL27A-201ENST00000314138 CDK11BP21127 795 aaKnown RBP15.93■□□□□ 0.14
RPL27A-201ENST00000314138 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.93■□□□□ 0.14
RPL27A-201ENST00000314138 CCNB3Q8WWL7 1395 aa15.93■□□□□ 0.14
RPL27A-201ENST00000314138 EID1Q9Y6B2 187 aa15.92■□□□□ 0.14
RPL27A-201ENST00000314138 POGKQ9P215 609 aa15.91■□□□□ 0.14
RPL27A-201ENST00000314138 FAM69CQ0P6D2 419 aa15.91■□□□□ 0.14
RPL27A-201ENST00000314138 KDM2AQ9Y2K7 1162 aa15.88■□□□□ 0.13
RPL27A-201ENST00000314138 ATAD2BQ9ULI0 1458 aa15.88■□□□□ 0.13
RPL27A-201ENST00000314138 NCLP19338 710 aaKnown RBP15.86■□□□□ 0.13
RPL27A-201ENST00000314138 VSIG10Q8N0Z9 540 aa15.85■□□□□ 0.13
RPL27A-201ENST00000314138 FANCD2Q9BXW9 1451 aa15.84■□□□□ 0.13
RPL27A-201ENST00000314138 L1TD1Q5T7N2 865 aaKnown RBP15.83■□□□□ 0.13
RPL27A-201ENST00000314138 PNNQ9H307 717 aaKnown RBP15.83■□□□□ 0.12
RPL27A-201ENST00000314138 RRP7BPQ9NSQ0 103 aa15.83■□□□□ 0.12
RPL27A-201ENST00000314138 DNTTIP2Q5QJE6 756 aaKnown RBP15.82■□□□□ 0.12
RPL27A-201ENST00000314138 FHAD1B1AJZ9 1412 aa15.82■□□□□ 0.12
RPL27A-201ENST00000314138 GOLGA3Q08378 1498 aa15.81■□□□□ 0.12
RPL27A-201ENST00000314138 NPHP1O15259 732 aa15.81■□□□□ 0.12
RPL27A-201ENST00000314138 GOLGA6L22H0YM25 854 aa15.81■□□□□ 0.12
RPL27A-201ENST00000314138 RSPH6AQ9H0K4 717 aa15.8■□□□□ 0.12
RPL27A-201ENST00000314138 PTPRGP23470 1445 aa15.8■□□□□ 0.12
RPL27A-201ENST00000314138 RGL3Q3MIN7 710 aa15.78■□□□□ 0.12
RPL27A-201ENST00000314138 CDCA8Q53HL2 280 aa15.78■□□□□ 0.12
RPL27A-201ENST00000314138 ANO8Q9HCE9 1232 aaPredicted RBP15.78■□□□□ 0.12
RPL27A-201ENST00000314138 PTMAP06454 111 aaKnown RBP15.77■□□□□ 0.12
RPL27A-201ENST00000314138 CCDC9Q9Y3X0 531 aaKnown RBP15.77■□□□□ 0.12
RPL27A-201ENST00000314138 HSP90AA2PQ14568 343 aaPredicted RBP15.77■□□□□ 0.11
RPL27A-201ENST00000314138 DCAF8L1A6NGE4 600 aa15.76■□□□□ 0.11
RPL27A-201ENST00000314138 IPO9Q96P70 1041 aaKnown RBP15.76■□□□□ 0.11
RPL27A-201ENST00000314138 FOXD1Q16676 465 aa15.75■□□□□ 0.11
RPL27A-201ENST00000314138 AMER1Q5JTC6 1135 aaPredicted RBP15.75■□□□□ 0.11
RPL27A-201ENST00000314138 RSPH4AQ5TD94 716 aa15.73■□□□□ 0.11
RPL27A-201ENST00000314138 EIF4G2P78344 907 aaKnown RBP eCLIP15.72■□□□□ 0.11
RPL27A-201ENST00000314138 SPAG9O60271 1321 aaKnown RBP15.71■□□□□ 0.11
RPL27A-201ENST00000314138 FANCIQ9NVI1 1328 aa15.71■□□□□ 0.11
RPL27A-201ENST00000314138 CCER2I3L3R5 266 aa15.7■□□□□ 0.1
RPL27A-201ENST00000314138 MROH2BQ7Z745 1585 aa15.69■□□□□ 0.1
RPL27A-201ENST00000314138 CCDC88BA6NC98 1476 aa15.69■□□□□ 0.1
RPL27A-201ENST00000314138 NCAPD3P42695 1498 aa15.69■□□□□ 0.1
RPL27A-201ENST00000314138 WASHC2CQ9Y4E1 1318 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms