RNA–Protein interactions for RNA: ENST00000265361.7

SEMA3C-201, Transcript of semaphorin 3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA3C, Length 5,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-201ENST00000265361 EEA1Q15075 1411 aa23.53■■□□□ 1.36
SEMA3C-201ENST00000265361 CHIC2Q9UKJ5 165 aa23.52■■□□□ 1.36
SEMA3C-201ENST00000265361 ANP32EQ9BTT0 268 aa23.52■■□□□ 1.36
SEMA3C-201ENST00000265361 WIZO95785 1651 aa23.51■■□□□ 1.35
SEMA3C-201ENST00000265361 ABCC8Q09428 1581 aa23.51■■□□□ 1.35
SEMA3C-201ENST00000265361 TSPY4P0CV99 314 aa23.49■■□□□ 1.35
SEMA3C-201ENST00000265361 TSPY10P0CW01 314 aa23.49■■□□□ 1.35
SEMA3C-201ENST00000265361 A0A0G2JS52 829 aa23.46■■□□□ 1.35
SEMA3C-201ENST00000265361 CCDC88BA6NC98 1476 aa23.45■■□□□ 1.35
SEMA3C-201ENST00000265361 KDM2AQ9Y2K7 1162 aa23.45■■□□□ 1.34
SEMA3C-201ENST00000265361 CDK11BP21127 795 aaKnown RBP23.44■■□□□ 1.34
SEMA3C-201ENST00000265361 ARXQ96QS3 562 aa23.44■■□□□ 1.34
SEMA3C-201ENST00000265361 MRS2Q9HD23 443 aa23.44■■□□□ 1.34
SEMA3C-201ENST00000265361 MYH16Q9H6N6 1097 aa23.43■■□□□ 1.34
SEMA3C-201ENST00000265361 GLIPR1L2Q4G1C9 344 aa23.43■■□□□ 1.34
SEMA3C-201ENST00000265361 BAZ1BQ9UIG0 1483 aaKnown RBP23.4■■□□□ 1.34
SEMA3C-201ENST00000265361 NBR1Q14596 966 aa23.38■■□□□ 1.33
SEMA3C-201ENST00000265361 CEP164Q9UPV0 1460 aa23.34■■□□□ 1.33
SEMA3C-201ENST00000265361 ZBTB7CA1YPR0 619 aa23.3■■□□□ 1.32
SEMA3C-201ENST00000265361 SUPT16HQ9Y5B9 1047 aaKnown RBP23.29■■□□□ 1.32
SEMA3C-201ENST00000265361 PLEKHG5O94827 1062 aa23.29■■□□□ 1.32
SEMA3C-201ENST00000265361 C14orf37Q86TY3 774 aa23.29■■□□□ 1.32
SEMA3C-201ENST00000265361 PPP1R15AO75807 674 aaPredicted RBP23.25■■□□□ 1.31
SEMA3C-201ENST00000265361 MTUS2Q5JR59 1369 aa23.24■■□□□ 1.31
SEMA3C-201ENST00000265361 NCLP19338 710 aaKnown RBP23.21■■□□□ 1.31
SEMA3C-201ENST00000265361 IRX6P78412 446 aaPredicted RBP23.21■■□□□ 1.31
SEMA3C-201ENST00000265361 TOP2AP11388 1531 aaKnown RBP23.2■■□□□ 1.3
SEMA3C-201ENST00000265361 EIF4G2P78344 907 aaKnown RBP eCLIP23.2■■□□□ 1.3
SEMA3C-201ENST00000265361 SENP3Q9H4L4 574 aaPredicted RBP23.2■■□□□ 1.3
SEMA3C-201ENST00000265361 CHMP7Q8WUX9 453 aaPredicted RBP23.19■■□□□ 1.3
SEMA3C-201ENST00000265361 BECN1Q14457 450 aa23.17■■□□□ 1.3
SEMA3C-201ENST00000265361 HIRIP3Q9BW71 556 aaPredicted RBP23.17■■□□□ 1.3
SEMA3C-201ENST00000265361 GOLGA6L22H0YM25 854 aa23.12■■□□□ 1.29
SEMA3C-201ENST00000265361 KIF27Q86VH2 1401 aa23.11■■□□□ 1.29
SEMA3C-201ENST00000265361 RUSC2Q8N2Y8 1516 aa23.11■■□□□ 1.29
SEMA3C-201ENST00000265361 HAP1P54257 671 aaPredicted RBP23.11■■□□□ 1.29
SEMA3C-201ENST00000265361 TRIM44Q96DX7 344 aaPredicted RBP23.1■■□□□ 1.29
SEMA3C-201ENST00000265361 RRP7BPQ9NSQ0 103 aa23.09■■□□□ 1.29
SEMA3C-201ENST00000265361 KCNH8Q96L42 1107 aa23.09■■□□□ 1.29
SEMA3C-201ENST00000265361 CFAP53Q96M91 514 aa23.09■■□□□ 1.29
SEMA3C-201ENST00000265361 DDRGK1Q96HY6 314 aa23.08■■□□□ 1.29
SEMA3C-201ENST00000265361 ZRSR1Q15695 479 aaKnown RBP23.07■■□□□ 1.28
SEMA3C-201ENST00000265361 RGL3Q3MIN7 710 aa23.06■■□□□ 1.28
SEMA3C-201ENST00000265361 VPS8Q8N3P4 1428 aa23.04■■□□□ 1.28
SEMA3C-201ENST00000265361 SMARCA4P51532 1647 aa23.03■■□□□ 1.28
SEMA3C-201ENST00000265361 PLEKHD1A6NEE1 506 aa23.02■■□□□ 1.28
SEMA3C-201ENST00000265361 PPM1GO15355 546 aaPredicted RBP23.01■■□□□ 1.27
SEMA3C-201ENST00000265361 CDCA8Q53HL2 280 aa23■■□□□ 1.27
SEMA3C-201ENST00000265361 KANK4Q5T7N3 995 aaPredicted RBP23■■□□□ 1.27
SEMA3C-201ENST00000265361 KNSTRNQ9Y448 316 aa22.99■■□□□ 1.27
SEMA3C-201ENST00000265361 CASC1Q6TDU7 716 aa22.97■■□□□ 1.27
SEMA3C-201ENST00000265361 TSHZ2Q9NRE2 1034 aa22.97■■□□□ 1.27
SEMA3C-201ENST00000265361 PTMAP06454 111 aaKnown RBP22.96■■□□□ 1.27
SEMA3C-201ENST00000265361 ARID4BQ4LE39 1312 aaPredicted RBP22.96■■□□□ 1.27
SEMA3C-201ENST00000265361 FTSJ3Q8IY81 847 aaKnown RBP22.95■■□□□ 1.26
SEMA3C-201ENST00000265361 TULP1O00294 542 aaPredicted RBP22.9■■□□□ 1.26
SEMA3C-201ENST00000265361 SENP3-EIF4A1A0A087X0R7 540 aa22.9■■□□□ 1.26
SEMA3C-201ENST00000265361 NEUROD2Q15784 382 aa22.9■■□□□ 1.26
SEMA3C-201ENST00000265361 SIN3AQ96ST3 1273 aa22.9■■□□□ 1.26
SEMA3C-201ENST00000265361 RBM19Q9Y4C8 960 aaKnown RBP22.9■■□□□ 1.26
SEMA3C-201ENST00000265361 MAPK8IP3Q9UPT6 1336 aa22.89■■□□□ 1.25
SEMA3C-201ENST00000265361 RAPGEF2Q9Y4G8 1499 aa22.88■■□□□ 1.25
SEMA3C-201ENST00000265361 TPRNQ4KMQ1 711 aa22.88■■□□□ 1.25
SEMA3C-201ENST00000265361 LMOD2Q6P5Q4 547 aa22.88■■□□□ 1.25
SEMA3C-201ENST00000265361 CCNB3Q8WWL7 1395 aa22.88■■□□□ 1.25
SEMA3C-201ENST00000265361 SMARCA2P51531 1590 aa22.87■■□□□ 1.25
SEMA3C-201ENST00000265361 LAS1LQ9Y4W2 734 aaKnown RBP22.87■■□□□ 1.25
SEMA3C-201ENST00000265361 NUDCQ9Y266 331 aa22.87■■□□□ 1.25
SEMA3C-201ENST00000265361 CUX2O14529 1486 aa22.86■■□□□ 1.25
SEMA3C-201ENST00000265361 DNTTIP2Q5QJE6 756 aaKnown RBP22.86■■□□□ 1.25
SEMA3C-201ENST00000265361 CARD11Q9BXL7 1154 aa22.85■■□□□ 1.25
SEMA3C-201ENST00000265361 ATAD2BQ9ULI0 1458 aa22.83■■□□□ 1.25
SEMA3C-201ENST00000265361 CFDP1Q9UEE9 299 aaPredicted RBP22.83■■□□□ 1.25
SEMA3C-201ENST00000265361 NPHP1O15259 732 aa22.82■■□□□ 1.24
SEMA3C-201ENST00000265361 TNNT2P45379 298 aaPredicted RBP22.82■■□□□ 1.24
SEMA3C-201ENST00000265361 POGKQ9P215 609 aa22.81■■□□□ 1.24
SEMA3C-201ENST00000265361 CARMIL1Q5VZK9 1371 aa22.81■■□□□ 1.24
SEMA3C-201ENST00000265361 FGD1P98174 961 aa22.77■■□□□ 1.24
SEMA3C-201ENST00000265361 FRAT1Q92837 279 aaPredicted RBP22.76■■□□□ 1.23
SEMA3C-201ENST00000265361 CHMP4BQ9H444 224 aaKnown RBP22.76■■□□□ 1.23
SEMA3C-201ENST00000265361 TAOK2Q9UL54 1235 aa22.76■■□□□ 1.23
SEMA3C-201ENST00000265361 PLCB2Q00722 1185 aa22.75■■□□□ 1.23
SEMA3C-201ENST00000265361 OS9Q13438 667 aaPredicted RBP22.75■■□□□ 1.23
SEMA3C-201ENST00000265361 RGS3P49796 1198 aa22.75■■□□□ 1.23
SEMA3C-201ENST00000265361 ERICH6BQ5W0A0 696 aa22.73■■□□□ 1.23
SEMA3C-201ENST00000265361 RTN4Q9NQC3 1192 aaKnown RBP22.73■■□□□ 1.23
SEMA3C-201ENST00000265361 KCNJ4P48050 445 aa22.71■■□□□ 1.23
SEMA3C-201ENST00000265361 MS4A1P11836 297 aa22.69■■□□□ 1.22
SEMA3C-201ENST00000265361 U2SURPO15042 1029 aaKnown RBP22.69■■□□□ 1.22
SEMA3C-201ENST00000265361 DEKP35659 375 aaKnown RBP22.68■■□□□ 1.22
SEMA3C-201ENST00000265361 GOLGA2Q08379 1002 aa22.67■■□□□ 1.22
SEMA3C-201ENST00000265361 NAP1L2Q9ULW6 460 aaPredicted RBP22.66■■□□□ 1.22
SEMA3C-201ENST00000265361 GOLGA6L6A8MZA4 724 aa22.65■■□□□ 1.22
SEMA3C-201ENST00000265361 NRDCO43847 1150 aa22.65■■□□□ 1.22
SEMA3C-201ENST00000265361 HSP90AB1P08238 724 aaKnown RBP22.64■■□□□ 1.21
SEMA3C-201ENST00000265361 PNNQ9H307 717 aaKnown RBP22.63■■□□□ 1.21
SEMA3C-201ENST00000265361 FHAD1B1AJZ9 1412 aa22.63■■□□□ 1.21
SEMA3C-201ENST00000265361 PPP4R2Q9NY27 417 aa22.62■■□□□ 1.21
SEMA3C-201ENST00000265361 NOP58Q9Y2X3 529 aaKnown RBP22.61■■□□□ 1.21
SEMA3C-201ENST00000265361 RAB3GAP2Q9H2M9 1393 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms