RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 ANP32BQ92688 251 aaKnown RBP19.15■□□□□ 0.66
ZC3H4-201ENST00000253048 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.13■□□□□ 0.65
ZC3H4-201ENST00000253048 PPM1GO15355 546 aaPredicted RBP19.11■□□□□ 0.65
ZC3H4-201ENST00000253048 TULP1O00294 542 aaPredicted RBP19.07■□□□□ 0.64
ZC3H4-201ENST00000253048 CFDP1Q9UEE9 299 aaPredicted RBP19.06■□□□□ 0.64
ZC3H4-201ENST00000253048 RGL3Q3MIN7 710 aa19.06■□□□□ 0.64
ZC3H4-201ENST00000253048 ZCCHC6Q5VYS8 1495 aaKnown RBP19.05■□□□□ 0.64
ZC3H4-201ENST00000253048 RSF1Q96T23 1441 aaPredicted RBP19.05■□□□□ 0.64
ZC3H4-201ENST00000253048 CFAP53Q96M91 514 aa19.05■□□□□ 0.64
ZC3H4-201ENST00000253048 FAM9BQ8IZU0 186 aa19.05■□□□□ 0.64
ZC3H4-201ENST00000253048 RRP7BPQ9NSQ0 103 aa19.04■□□□□ 0.64
ZC3H4-201ENST00000253048 CCDC9Q9Y3X0 531 aaKnown RBP19.03■□□□□ 0.64
ZC3H4-201ENST00000253048 ANP32AP39687 249 aaKnown RBP19.02■□□□□ 0.64
ZC3H4-201ENST00000253048 GOLGA2Q08379 1002 aa18.99■□□□□ 0.63
ZC3H4-201ENST00000253048 BAZ1BQ9UIG0 1483 aaKnown RBP18.99■□□□□ 0.63
ZC3H4-201ENST00000253048 EIF4G2P78344 907 aaKnown RBP eCLIP18.97■□□□□ 0.63
ZC3H4-201ENST00000253048 CDCA8Q53HL2 280 aa18.97■□□□□ 0.63
ZC3H4-201ENST00000253048 KANK1Q14678 1352 aa18.97■□□□□ 0.63
ZC3H4-201ENST00000253048 TMX4Q9H1E5 349 aaPredicted RBP18.95■□□□□ 0.62
ZC3H4-201ENST00000253048 ACIN1Q9UKV3 1341 aaKnown RBP18.9■□□□□ 0.62
ZC3H4-201ENST00000253048 HNRNPUQ00839 825 aaKnown RBP eCLIP18.9■□□□□ 0.62
ZC3H4-201ENST00000253048 GTF3C3Q9Y5Q9 886 aa18.89■□□□□ 0.61
ZC3H4-201ENST00000253048 MAPK8IP3Q9UPT6 1336 aa18.88■□□□□ 0.61
ZC3H4-201ENST00000253048 LAS1LQ9Y4W2 734 aaKnown RBP18.88■□□□□ 0.61
ZC3H4-201ENST00000253048 CSB-PGBD3P0DP91 1061 aa18.87■□□□□ 0.61
ZC3H4-201ENST00000253048 MYO15BQ96JP2 1530 aa18.87■□□□□ 0.61
ZC3H4-201ENST00000253048 NUDCQ9Y266 331 aa18.86■□□□□ 0.61
ZC3H4-201ENST00000253048 KNSTRNQ9Y448 316 aa18.86■□□□□ 0.61
ZC3H4-201ENST00000253048 SOX12O15370 315 aa18.85■□□□□ 0.61
ZC3H4-201ENST00000253048 EIF4G1Q04637 1599 aaKnown RBP18.83■□□□□ 0.61
ZC3H4-201ENST00000253048 DCAF1Q9Y4B6 1507 aa18.83■□□□□ 0.61
ZC3H4-201ENST00000253048 DDX10Q13206 875 aaKnown RBP18.83■□□□□ 0.6
ZC3H4-201ENST00000253048 GGT6Q6P531 493 aa18.82■□□□□ 0.6
ZC3H4-201ENST00000253048 PAK3O75914 559 aaPredicted RBP18.81■□□□□ 0.6
ZC3H4-201ENST00000253048 MRS2Q9HD23 443 aa18.8■□□□□ 0.6
ZC3H4-201ENST00000253048 EIF5BO60841 1220 aaKnown RBP18.8■□□□□ 0.6
ZC3H4-201ENST00000253048 ISY1Q9ULR0 285 aaKnown RBP18.8■□□□□ 0.6
ZC3H4-201ENST00000253048 OS9Q13438 667 aaPredicted RBP18.8■□□□□ 0.6
ZC3H4-201ENST00000253048 CCDC180Q9P1Z9 1646 aa18.77■□□□□ 0.6
ZC3H4-201ENST00000253048 KIF27Q86VH2 1401 aa18.77■□□□□ 0.6
ZC3H4-201ENST00000253048 CASC1Q6TDU7 716 aa18.77■□□□□ 0.6
ZC3H4-201ENST00000253048 CLIP1P30622 1438 aa18.76■□□□□ 0.59
ZC3H4-201ENST00000253048 DCAF8L1A6NGE4 600 aa18.76■□□□□ 0.59
ZC3H4-201ENST00000253048 MEX3CQ5U5Q3 659 aaKnown RBP18.76■□□□□ 0.59
ZC3H4-201ENST00000253048 SRPK2P78362 688 aaKnown RBP18.75■□□□□ 0.59
ZC3H4-201ENST00000253048 GLIPR1L2Q4G1C9 344 aa18.75■□□□□ 0.59
ZC3H4-201ENST00000253048 CCNB3Q8WWL7 1395 aa18.75■□□□□ 0.59
ZC3H4-201ENST00000253048 EID1Q9Y6B2 187 aa18.75■□□□□ 0.59
ZC3H4-201ENST00000253048 NACADO15069 1562 aa18.75■□□□□ 0.59
ZC3H4-201ENST00000253048 TAOK2Q9UL54 1235 aa18.74■□□□□ 0.59
ZC3H4-201ENST00000253048 ZRSR1Q15695 479 aaKnown RBP18.74■□□□□ 0.59
ZC3H4-201ENST00000253048 CLSTN1O94985 981 aa18.73■□□□□ 0.59
ZC3H4-201ENST00000253048 NCLP19338 710 aaKnown RBP18.73■□□□□ 0.59
ZC3H4-201ENST00000253048 PNNQ9H307 717 aaKnown RBP18.73■□□□□ 0.59
ZC3H4-201ENST00000253048 PHF23Q9BUL5 403 aaPredicted RBP18.73■□□□□ 0.59
ZC3H4-201ENST00000253048 CARD11Q9BXL7 1154 aa18.73■□□□□ 0.59
ZC3H4-201ENST00000253048 TNNT2P45379 298 aaPredicted RBP18.71■□□□□ 0.59
ZC3H4-201ENST00000253048 NCBP3Q53F19 620 aaKnown RBP18.71■□□□□ 0.59
ZC3H4-201ENST00000253048 G3V3G9 751 aa18.71■□□□□ 0.59
ZC3H4-201ENST00000253048 DCAF8Q5TAQ9 597 aa18.71■□□□□ 0.59
ZC3H4-201ENST00000253048 FTSJ3Q8IY81 847 aaKnown RBP18.7■□□□□ 0.58
ZC3H4-201ENST00000253048 ZNF330Q9Y3S2 320 aaPredicted RBP18.7■□□□□ 0.58
ZC3H4-201ENST00000253048 U2SURPO15042 1029 aaKnown RBP18.7■□□□□ 0.58
ZC3H4-201ENST00000253048 CCDC136Q96JN2 1154 aa18.7■□□□□ 0.58
ZC3H4-201ENST00000253048 CARMIL2Q6F5E8 1435 aa18.69■□□□□ 0.58
ZC3H4-201ENST00000253048 SAFB2Q14151 953 aaKnown RBP eCLIP18.69■□□□□ 0.58
ZC3H4-201ENST00000253048 NEUROD2Q15784 382 aa18.68■□□□□ 0.58
ZC3H4-201ENST00000253048 STK26Q9P289 416 aa18.67■□□□□ 0.58
ZC3H4-201ENST00000253048 PDS5BQ9NTI5 1447 aa18.66■□□□□ 0.58
ZC3H4-201ENST00000253048 RTF1Q92541 710 aaKnown RBP18.65■□□□□ 0.58
ZC3H4-201ENST00000253048 FGD1P98174 961 aa18.64■□□□□ 0.57
ZC3H4-201ENST00000253048 WRNQ14191 1432 aaPredicted RBP eCLIP18.62■□□□□ 0.57
ZC3H4-201ENST00000253048 NAP1L2Q9ULW6 460 aaPredicted RBP18.61■□□□□ 0.57
ZC3H4-201ENST00000253048 HDGFL2Q7Z4V5 671 aaPredicted RBP18.61■□□□□ 0.57
ZC3H4-201ENST00000253048 FKBP8Q14318 412 aa18.6■□□□□ 0.57
ZC3H4-201ENST00000253048 MSH5O43196 834 aa18.6■□□□□ 0.57
ZC3H4-201ENST00000253048 CHMP4BQ9H444 224 aaKnown RBP18.58■□□□□ 0.57
ZC3H4-201ENST00000253048 GOLGA3Q08378 1498 aa18.58■□□□□ 0.56
ZC3H4-201ENST00000253048 KCNJ4P48050 445 aa18.58■□□□□ 0.56
ZC3H4-201ENST00000253048 HIRIP3Q9BW71 556 aaPredicted RBP18.57■□□□□ 0.56
ZC3H4-201ENST00000253048 CYB5RLQ6IPT4 315 aa18.56■□□□□ 0.56
ZC3H4-201ENST00000253048 EFCAB2Q5VUJ9 269 aa18.55■□□□□ 0.56
ZC3H4-201ENST00000253048 CECR2Q9BXF3 1484 aa18.53■□□□□ 0.56
ZC3H4-201ENST00000253048 TMF1P82094 1093 aa18.52■□□□□ 0.56
ZC3H4-201ENST00000253048 EEA1Q15075 1411 aa18.52■□□□□ 0.55
ZC3H4-201ENST00000253048 TPRNQ4KMQ1 711 aa18.51■□□□□ 0.55
ZC3H4-201ENST00000253048 EVA1CP58658 441 aa18.5■□□□□ 0.55
ZC3H4-201ENST00000253048 GTF2E1P29083 439 aaPredicted RBP18.49■□□□□ 0.55
ZC3H4-201ENST00000253048 KLHL34Q8N239 644 aa18.49■□□□□ 0.55
ZC3H4-201ENST00000253048 NGDNQ8NEJ9 315 aaKnown RBP18.49■□□□□ 0.55
ZC3H4-201ENST00000253048 CC2D1BQ5T0F9 858 aaKnown RBP18.48■□□□□ 0.55
ZC3H4-201ENST00000253048 MORC1Q86VD1 984 aa18.48■□□□□ 0.55
ZC3H4-201ENST00000253048 DCAF11Q8TEB1 546 aa18.48■□□□□ 0.55
ZC3H4-201ENST00000253048 OSCARQ8IYS5 282 aa18.48■□□□□ 0.55
ZC3H4-201ENST00000253048 CUX2O14529 1486 aa18.48■□□□□ 0.55
ZC3H4-201ENST00000253048 GOLGA6L22H0YM25 854 aa18.48■□□□□ 0.55
ZC3H4-201ENST00000253048 BECN1Q14457 450 aa18.47■□□□□ 0.55
ZC3H4-201ENST00000253048 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.47■□□□□ 0.55
ZC3H4-201ENST00000253048 MS4A1P11836 297 aa18.46■□□□□ 0.55
ZC3H4-201ENST00000253048 CARMIL1Q5VZK9 1371 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms