RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 K7EP13 123 aa10.95□□□□□ -0.66
TRIM3-215ENST00000639856 TAL2Q16559 108 aa10.95□□□□□ -0.66
TRIM3-215ENST00000639856 C20orf203Q8NBC4 194 aa10.95□□□□□ -0.66
TRIM3-215ENST00000639856 COTL1Q14019 142 aa10.94□□□□□ -0.66
TRIM3-215ENST00000639856 STHQ8IWL8 128 aa10.94□□□□□ -0.66
TRIM3-215ENST00000639856 RAB37Q96AX2 223 aa10.94□□□□□ -0.66
TRIM3-215ENST00000639856 SPXQ9BT56 116 aa10.94□□□□□ -0.66
TRIM3-215ENST00000639856 XCL2Q9UBD3 114 aa10.94□□□□□ -0.66
TRIM3-215ENST00000639856 H3BUT2 72 aa10.93□□□□□ -0.66
TRIM3-215ENST00000639856 SMIM13P0DJ93 91 aa10.93□□□□□ -0.66
TRIM3-215ENST00000639856 EMP1P54849 157 aa10.93□□□□□ -0.66
TRIM3-215ENST00000639856 CFAP126Q5VTH2 177 aa10.93□□□□□ -0.66
TRIM3-215ENST00000639856 BEAN1Q3B7T3 259 aa10.93□□□□□ -0.66
TRIM3-215ENST00000639856 C19orf73Q9NVV2 129 aa10.93□□□□□ -0.66
TRIM3-215ENST00000639856 HERVK_113P61574 105 aa10.92□□□□□ -0.66
TRIM3-215ENST00000639856 RHODO00212 210 aa10.91□□□□□ -0.66
TRIM3-215ENST00000639856 HIST1H4GQ99525 98 aa10.91□□□□□ -0.66
TRIM3-215ENST00000639856 CITED1Q99966 193 aa10.91□□□□□ -0.66
TRIM3-215ENST00000639856 TNFRSF18Q9Y5U5 241 aa10.91□□□□□ -0.66
TRIM3-215ENST00000639856 ZNRF2Q8NHG8 242 aa10.91□□□□□ -0.66
TRIM3-215ENST00000639856 OPRPNQ99935 248 aaPredicted RBP10.91□□□□□ -0.66
TRIM3-215ENST00000639856 NAA38Q9BRA0 125 aaKnown RBP10.91□□□□□ -0.66
TRIM3-215ENST00000639856 MRPL16Q9NX20 251 aaKnown RBP10.91□□□□□ -0.66
TRIM3-215ENST00000639856 TRBV7-3A0A075B6L6 115 aa10.9□□□□□ -0.66
TRIM3-215ENST00000639856 GAGE10A6NGK3 116 aa10.9□□□□□ -0.66
TRIM3-215ENST00000639856 ZNF815PA8K554 130 aa10.9□□□□□ -0.66
TRIM3-215ENST00000639856 Q6ZSN1 163 aa10.9□□□□□ -0.66
TRIM3-215ENST00000639856 C1orf158Q8N1D5 194 aa10.9□□□□□ -0.66
TRIM3-215ENST00000639856 AZU1P20160 251 aa10.9□□□□□ -0.67
TRIM3-215ENST00000639856 TMEM170BQ5T4T1 132 aa10.9□□□□□ -0.67
TRIM3-215ENST00000639856 NFE4Q86UQ8 179 aa10.9□□□□□ -0.67
TRIM3-215ENST00000639856 PHLDA1Q8WV24 401 aaPredicted RBP10.9□□□□□ -0.67
TRIM3-215ENST00000639856 NHP2Q9NX24 153 aaKnown RBP10.9□□□□□ -0.67
TRIM3-215ENST00000639856 IGHV3-53P01767 116 aa10.89□□□□□ -0.67
TRIM3-215ENST00000639856 GTF2H5Q6ZYL4 71 aa10.89□□□□□ -0.67
TRIM3-215ENST00000639856 Q9UF83 564 aa10.89□□□□□ -0.67
TRIM3-215ENST00000639856 IGLV4-3A0A075B6K6 122 aa10.88□□□□□ -0.67
TRIM3-215ENST00000639856 IGHV3OR16-12A0A075B7B8 117 aa10.88□□□□□ -0.67
TRIM3-215ENST00000639856 A0A1W2PPM0 123 aa10.88□□□□□ -0.67
TRIM3-215ENST00000639856 RS1O15537 224 aa10.88□□□□□ -0.67
TRIM3-215ENST00000639856 PYGO1Q9Y3Y4 419 aa10.88□□□□□ -0.67
TRIM3-215ENST00000639856 K7ERJ3 54 aa10.88□□□□□ -0.67
TRIM3-215ENST00000639856 RPL35AP18077 110 aaKnown RBP10.88□□□□□ -0.67
TRIM3-215ENST00000639856 CMC4P56277 68 aaPredicted RBP10.88□□□□□ -0.67
TRIM3-215ENST00000639856 GIG44P09565 113 aaPredicted RBP10.87□□□□□ -0.67
TRIM3-215ENST00000639856 RNF151Q2KHN1 245 aa10.87□□□□□ -0.67
TRIM3-215ENST00000639856 IL17DQ8TAD2 202 aa10.87□□□□□ -0.67
TRIM3-215ENST00000639856 DNAJC30Q96LL9 226 aa10.87□□□□□ -0.67
TRIM3-215ENST00000639856 FAM110AQ9BQ89 295 aa10.87□□□□□ -0.67
TRIM3-215ENST00000639856 VCX2Q9H322 139 aa10.87□□□□□ -0.67
TRIM3-215ENST00000639856 K7EP34 96 aa10.87□□□□□ -0.67
TRIM3-215ENST00000639856 SAMD5Q5TGI4 173 aa10.87□□□□□ -0.67
TRIM3-215ENST00000639856 SCGB1D4Q6XE38 83 aa10.87□□□□□ -0.67
TRIM3-215ENST00000639856 PLEKHB2Q96CS7 222 aa10.86□□□□□ -0.67
TRIM3-215ENST00000639856 GAGE12BA1L429 117 aa10.85□□□□□ -0.67
TRIM3-215ENST00000639856 TRRAPQ9Y4A5 3859 aa10.85□□□□□ -0.67
TRIM3-215ENST00000639856 FABP2P12104 132 aa10.85□□□□□ -0.67
TRIM3-215ENST00000639856 CRYBA4P53673 196 aa10.85□□□□□ -0.67
TRIM3-215ENST00000639856 C12orf74Q32Q52 190 aa10.85□□□□□ -0.67
TRIM3-215ENST00000639856 TSPEAR-AS2P59090 65 aa10.84□□□□□ -0.67
TRIM3-215ENST00000639856 FAM104AQ969W3 186 aa10.84□□□□□ -0.67
TRIM3-215ENST00000639856 AMELXQ99217 191 aa10.84□□□□□ -0.67
TRIM3-215ENST00000639856 CHCHD7Q9BUK0 85 aa10.84□□□□□ -0.67
TRIM3-215ENST00000639856 SPCS1Q9Y6A9 102 aa10.84□□□□□ -0.67
TRIM3-215ENST00000639856 KRTAP24-1Q3LI83 254 aa10.84□□□□□ -0.67
TRIM3-215ENST00000639856 TMEM263Q8WUH6 116 aaKnown RBP10.84□□□□□ -0.67
TRIM3-215ENST00000639856 FBN1P35555 2871 aaKnown RBP10.84□□□□□ -0.67
TRIM3-215ENST00000639856 TRGV1A0A0A0MS02 117 aa10.83□□□□□ -0.68
TRIM3-215ENST00000639856 A0A0J9YXV3 536 aa10.83□□□□□ -0.68
TRIM3-215ENST00000639856 A0A1B0GWB2 263 aa10.83□□□□□ -0.68
TRIM3-215ENST00000639856 TMEM223A0PJW6 202 aa10.83□□□□□ -0.68
TRIM3-215ENST00000639856 J3QQQ9 107 aa10.83□□□□□ -0.68
TRIM3-215ENST00000639856 ZNF22P17026 224 aaPredicted RBP10.83□□□□□ -0.68
TRIM3-215ENST00000639856 C9orf66Q5T8R8 295 aa10.83□□□□□ -0.68
TRIM3-215ENST00000639856 STAB1Q9NY15 2570 aa10.83□□□□□ -0.68
TRIM3-215ENST00000639856 A0A0J9YY99 117 aa10.82□□□□□ -0.68
TRIM3-215ENST00000639856 OR5A1Q8NGJ0 315 aa10.82□□□□□ -0.68
TRIM3-215ENST00000639856 SRSF9Q13242 221 aaKnown RBP eCLIP10.82□□□□□ -0.68
TRIM3-215ENST00000639856 CEMP1Q6PRD7 247 aaPredicted RBP10.82□□□□□ -0.68
TRIM3-215ENST00000639856 SPANXA1Q9NS26 97 aa10.82□□□□□ -0.68
TRIM3-215ENST00000639856 UBE2D4Q9Y2X8 147 aa10.82□□□□□ -0.68
TRIM3-215ENST00000639856 IGLL5B9A064 214 aa10.81□□□□□ -0.68
TRIM3-215ENST00000639856 INSL3P51460 131 aa10.81□□□□□ -0.68
TRIM3-215ENST00000639856 MRPS36P82909 103 aaKnown RBP10.81□□□□□ -0.68
TRIM3-215ENST00000639856 MAST4O15021 2626 aa10.81□□□□□ -0.68
TRIM3-215ENST00000639856 IGHV3-38A0A0C4DH36 116 aa10.81□□□□□ -0.68
TRIM3-215ENST00000639856 TMEM238LA0A1B0GVL6 79 aa10.81□□□□□ -0.68
TRIM3-215ENST00000639856 A6NJY4 79 aa10.81□□□□□ -0.68
TRIM3-215ENST00000639856 LEPROTO15243 131 aa10.81□□□□□ -0.68
TRIM3-215ENST00000639856 LGALS3P17931 250 aaKnown RBP10.81□□□□□ -0.68
TRIM3-215ENST00000639856 Q6ZTI0 123 aa10.8□□□□□ -0.68
TRIM3-215ENST00000639856 ZNF479Q96JC4 524 aa10.8□□□□□ -0.68
TRIM3-215ENST00000639856 SPANXB1Q9NS25 103 aaPredicted RBP10.8□□□□□ -0.68
TRIM3-215ENST00000639856 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.79□□□□□ -0.68
TRIM3-215ENST00000639856 IGKV2-29A2NJV5 120 aaPredicted RBP10.79□□□□□ -0.68
TRIM3-215ENST00000639856 CSNK1G2-AS1Q8NCQ2 148 aa10.79□□□□□ -0.68
TRIM3-215ENST00000639856 SLC25A29Q8N8R3 303 aa10.79□□□□□ -0.68
TRIM3-215ENST00000639856 TRAV4A0A0B4J268 109 aa10.78□□□□□ -0.68
TRIM3-215ENST00000639856 DAZ2Q13117 558 aaKnown RBP10.78□□□□□ -0.68
TRIM3-215ENST00000639856 C1QTNF4Q9BXJ3 329 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms