RNA–Protein interactions for RNA: ENST00000636168.1

CHRNA1-208, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA1, Length 1,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-208ENST00000636168 Q6Q795 121 aa9.37□□□□□ -0.91
CHRNA1-208ENST00000636168 SPANXA1Q9NS26 97 aa9.37□□□□□ -0.91
CHRNA1-208ENST00000636168 IGKV2-40A0A087WW87 121 aaPredicted RBP9.36□□□□□ -0.91
CHRNA1-208ENST00000636168 PRSS29PA6NIE9 313 aa9.36□□□□□ -0.91
CHRNA1-208ENST00000636168 BUB3O43684 328 aa9.36□□□□□ -0.91
CHRNA1-208ENST00000636168 IGKV2D-40P01614 121 aaPredicted RBP9.36□□□□□ -0.91
CHRNA1-208ENST00000636168 GATA1P15976 413 aaPredicted RBP9.36□□□□□ -0.91
CHRNA1-208ENST00000636168 APRG1Q8IVJ8 170 aa9.36□□□□□ -0.91
CHRNA1-208ENST00000636168 GLMPQ8WWB7 406 aa9.36□□□□□ -0.91
CHRNA1-208ENST00000636168 WWC2-AS2Q96NR7 200 aa9.36□□□□□ -0.91
CHRNA1-208ENST00000636168 TRAV2A0A0B4J234 112 aa9.36□□□□□ -0.91
CHRNA1-208ENST00000636168 LINC01549A6NIU2 74 aa9.36□□□□□ -0.91
CHRNA1-208ENST00000636168 RPL7P18124 248 aaKnown RBP9.36□□□□□ -0.91
CHRNA1-208ENST00000636168 CMC4P56277 68 aaPredicted RBP9.36□□□□□ -0.91
CHRNA1-208ENST00000636168 TMEM78Q5T7P6 136 aa9.36□□□□□ -0.91
CHRNA1-208ENST00000636168 NEXN-AS1Q8NBZ9 246 aa9.36□□□□□ -0.91
CHRNA1-208ENST00000636168 MAP6D1Q9H9H5 199 aa9.35□□□□□ -0.91
CHRNA1-208ENST00000636168 RBAKDNA6NC62 111 aa9.34□□□□□ -0.91
CHRNA1-208ENST00000636168 A8MWV9 139 aa9.34□□□□□ -0.91
CHRNA1-208ENST00000636168 TOMM6Q96B49 74 aa9.34□□□□□ -0.91
CHRNA1-208ENST00000636168 RETNQ9HD89 108 aa9.34□□□□□ -0.91
CHRNA1-208ENST00000636168 SS18L2Q9UHA2 77 aa9.34□□□□□ -0.91
CHRNA1-208ENST00000636168 K7EQG2 157 aa9.34□□□□□ -0.91
CHRNA1-208ENST00000636168 ZFP2Q6ZN57 461 aa9.34□□□□□ -0.91
CHRNA1-208ENST00000636168 DCANP1Q8TF63 244 aa9.34□□□□□ -0.91
CHRNA1-208ENST00000636168 ORM1P02763 201 aa9.33□□□□□ -0.92
CHRNA1-208ENST00000636168 PSMB2P49721 201 aa9.33□□□□□ -0.92
CHRNA1-208ENST00000636168 DEFB131AP59861 70 aa9.33□□□□□ -0.92
CHRNA1-208ENST00000636168 ERCC8Q13216 396 aa9.33□□□□□ -0.92
CHRNA1-208ENST00000636168 PTH2Q96A98 100 aa9.33□□□□□ -0.92
CHRNA1-208ENST00000636168 TCL1BO95988 128 aa9.32□□□□□ -0.92
CHRNA1-208ENST00000636168 RPL35AP18077 110 aaKnown RBP9.32□□□□□ -0.92
CHRNA1-208ENST00000636168 ORMDL2Q53FV1 153 aa9.32□□□□□ -0.92
CHRNA1-208ENST00000636168 Q8TAT8 98 aa9.32□□□□□ -0.92
CHRNA1-208ENST00000636168 PRADC1Q9BSG0 188 aa9.32□□□□□ -0.92
CHRNA1-208ENST00000636168 SMIM2Q9BVW6 85 aa9.32□□□□□ -0.92
CHRNA1-208ENST00000636168 TRBV7-9A0A0J9YWB2 115 aa9.32□□□□□ -0.92
CHRNA1-208ENST00000636168 APOC4P55056 127 aa9.32□□□□□ -0.92
CHRNA1-208ENST00000636168 IGKV3D-20A0A0C4DH25 116 aa9.31□□□□□ -0.92
CHRNA1-208ENST00000636168 NDUFV3P56181 108 aaKnown RBP9.31□□□□□ -0.92
CHRNA1-208ENST00000636168 ANKRD29Q8N6D5 301 aa9.31□□□□□ -0.92
CHRNA1-208ENST00000636168 C10orf126Q8N4M7 172 aa9.3□□□□□ -0.92
CHRNA1-208ENST00000636168 KIR2DL5BQ8NHK3 375 aa9.3□□□□□ -0.92
CHRNA1-208ENST00000636168 SLC50A1Q9BRV3 221 aa9.3□□□□□ -0.92
CHRNA1-208ENST00000636168 LOC107984156A0A0G2JMH3 177 aa9.3□□□□□ -0.92
CHRNA1-208ENST00000636168 GAGE12JA6NER3 117 aa9.3□□□□□ -0.92
CHRNA1-208ENST00000636168 ZNF815PA8K554 130 aa9.3□□□□□ -0.92
CHRNA1-208ENST00000636168 B5MCH6 92 aa9.3□□□□□ -0.92
CHRNA1-208ENST00000636168 GAGE7O76087 117 aa9.3□□□□□ -0.92
CHRNA1-208ENST00000636168 GAGE12FP0CL80 117 aa9.3□□□□□ -0.92
CHRNA1-208ENST00000636168 GAGE12GP0CL81 117 aa9.3□□□□□ -0.92
CHRNA1-208ENST00000636168 GAGE12IP0CL82 117 aa9.3□□□□□ -0.92
CHRNA1-208ENST00000636168 GAGE4Q13068 117 aa9.3□□□□□ -0.92
CHRNA1-208ENST00000636168 ARL17AQ8IVW1 177 aa9.3□□□□□ -0.92
CHRNA1-208ENST00000636168 RASL10AQ92737 203 aa9.3□□□□□ -0.92
CHRNA1-208ENST00000636168 A0A0J9YY99 117 aa9.29□□□□□ -0.92
CHRNA1-208ENST00000636168 SNRPD3P62318 126 aaKnown RBP9.29□□□□□ -0.92
CHRNA1-208ENST00000636168 DEFB135Q30KP9 77 aa9.29□□□□□ -0.92
CHRNA1-208ENST00000636168 BAALCQ8WXS3 180 aa9.29□□□□□ -0.92
CHRNA1-208ENST00000636168 PLEKHB2Q96CS7 222 aa9.29□□□□□ -0.92
CHRNA1-208ENST00000636168 SCGB3A1Q96QR1 104 aa9.29□□□□□ -0.92
CHRNA1-208ENST00000636168 OVOL2Q9BRP0 275 aa9.29□□□□□ -0.92
CHRNA1-208ENST00000636168 EDA2RQ9HAV5 297 aa9.29□□□□□ -0.92
CHRNA1-208ENST00000636168 IGHV3-30P01768 117 aa9.28□□□□□ -0.92
CHRNA1-208ENST00000636168 IGHV3-30-5P0DP03 117 aa9.28□□□□□ -0.92
CHRNA1-208ENST00000636168 PRB4P10163 310 aaPredicted RBP9.28□□□□□ -0.92
CHRNA1-208ENST00000636168 STHQ8IWL8 128 aa9.28□□□□□ -0.92
CHRNA1-208ENST00000636168 C11orf21Q9P2W6 132 aa9.28□□□□□ -0.92
CHRNA1-208ENST00000636168 KNCNA6PVL3 124 aa9.28□□□□□ -0.92
CHRNA1-208ENST00000636168 CFC1BP0CG36 223 aa9.28□□□□□ -0.92
CHRNA1-208ENST00000636168 CFC1P0CG37 223 aa9.28□□□□□ -0.92
CHRNA1-208ENST00000636168 HLA-DMBP28068 263 aa9.28□□□□□ -0.92
CHRNA1-208ENST00000636168 RPL13AP40429 203 aaKnown RBP9.28□□□□□ -0.92
CHRNA1-208ENST00000636168 GAGE2BQ13066 116 aa9.28□□□□□ -0.92
CHRNA1-208ENST00000636168 GAGE2EQ4V326 116 aa9.28□□□□□ -0.92
CHRNA1-208ENST00000636168 PAPPA-AS1Q5QFB9 102 aa9.28□□□□□ -0.92
CHRNA1-208ENST00000636168 SLC25A29Q8N8R3 303 aa9.28□□□□□ -0.92
CHRNA1-208ENST00000636168 MRPL53Q96EL3 112 aaKnown RBP9.28□□□□□ -0.92
CHRNA1-208ENST00000636168 GAGE2DQ9UEU5 116 aa9.28□□□□□ -0.92
CHRNA1-208ENST00000636168 M0R381 172 aa9.27□□□□□ -0.93
CHRNA1-208ENST00000636168 SCGB1C2P0DMR2 95 aa9.27□□□□□ -0.93
CHRNA1-208ENST00000636168 P0DMU3 169 aa9.27□□□□□ -0.93
CHRNA1-208ENST00000636168 FAM231AP0DMU4 169 aa9.27□□□□□ -0.93
CHRNA1-208ENST00000636168 FAM231CP0DMU5 169 aa9.27□□□□□ -0.93
CHRNA1-208ENST00000636168 SRSF9Q13242 221 aaKnown RBP eCLIP9.27□□□□□ -0.93
CHRNA1-208ENST00000636168 TP53TG1Q9Y2A0 90 aa9.27□□□□□ -0.93
CHRNA1-208ENST00000636168 DNAH7Q8WXX0 4024 aa9.27□□□□□ -0.93
CHRNA1-208ENST00000636168 SPRY2O43597 315 aa9.26□□□□□ -0.93
CHRNA1-208ENST00000636168 RPL32P62910 135 aaKnown RBP9.26□□□□□ -0.93
CHRNA1-208ENST00000636168 MRPL23Q16540 153 aaKnown RBP9.26□□□□□ -0.93
CHRNA1-208ENST00000636168 MUC7Q8TAX7 377 aa9.26□□□□□ -0.93
CHRNA1-208ENST00000636168 KIR2DL4Q99706 377 aa9.26□□□□□ -0.93
CHRNA1-208ENST00000636168 SOCS3O14543 225 aa9.25□□□□□ -0.93
CHRNA1-208ENST00000636168 SLC25A20O43772 301 aa9.25□□□□□ -0.93
CHRNA1-208ENST00000636168 ID1P41134 155 aa9.25□□□□□ -0.93
CHRNA1-208ENST00000636168 SUMO2P61956 95 aaKnown RBP9.25□□□□□ -0.93
CHRNA1-208ENST00000636168 SCGB1D4Q6XE38 83 aa9.25□□□□□ -0.93
CHRNA1-208ENST00000636168 TRPT1Q86TN4 253 aaKnown RBP9.25□□□□□ -0.93
CHRNA1-208ENST00000636168 PRO1854Q9UHT4 67 aa9.25□□□□□ -0.93
CHRNA1-208ENST00000636168 IFITM1P13164 125 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms