RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	ZNF415	Q09FC8	603 aa		10.26	□□□□□ -0.77
CACNA1C-231	ENST00000616390	HIST2H2BC	Q6DN03	193 aa		10.26	□□□□□ -0.77
CACNA1C-231	ENST00000616390	ZNRF2	Q8NHG8	242 aa		10.26	□□□□□ -0.77
CACNA1C-231	ENST00000616390	PRADC1	Q9BSG0	188 aa		10.26	□□□□□ -0.77
CACNA1C-231	ENST00000616390	JMJD1C	Q15652	2540 aa		10.26	□□□□□ -0.77
CACNA1C-231	ENST00000616390	CRYGD	P07320	174 aa		10.25	□□□□□ -0.77
CACNA1C-231	ENST00000616390	TRBV20-1	A0A075B6N2	111 aa		10.25	□□□□□ -0.77
CACNA1C-231	ENST00000616390	RBMY1A1	P0DJD3	496 aa	Known RBP	10.25	□□□□□ -0.77
CACNA1C-231	ENST00000616390	RBMY1C	P0DJD4	496 aa		10.25	□□□□□ -0.77
CACNA1C-231	ENST00000616390	WFDC2	Q14508	124 aa		10.25	□□□□□ -0.77
CACNA1C-231	ENST00000616390	RBMY1F	Q15415	496 aa	Known RBP	10.25	□□□□□ -0.77
CACNA1C-231	ENST00000616390	DEFB113	Q30KQ7	82 aa		10.25	□□□□□ -0.77
CACNA1C-231	ENST00000616390	SCGB1D4	Q6XE38	83 aa		10.25	□□□□□ -0.77
CACNA1C-231	ENST00000616390	PRO0628	Q9UI54	55 aa		10.25	□□□□□ -0.77
CACNA1C-231	ENST00000616390	MYMX	A0A1B0GTQ4	84 aa		10.25	□□□□□ -0.77
CACNA1C-231	ENST00000616390	C11orf86	A6NJI1	115 aa		10.25	□□□□□ -0.77
CACNA1C-231	ENST00000616390		P0DMU3	169 aa		10.25	□□□□□ -0.77
CACNA1C-231	ENST00000616390	FAM231A	P0DMU4	169 aa		10.25	□□□□□ -0.77
CACNA1C-231	ENST00000616390	FAM231C	P0DMU5	169 aa		10.25	□□□□□ -0.77
CACNA1C-231	ENST00000616390	PROK1	P58294	105 aa		10.25	□□□□□ -0.77
CACNA1C-231	ENST00000616390	C9orf85	Q96MD7	179 aa		10.25	□□□□□ -0.77
CACNA1C-231	ENST00000616390	ZNF815P	A8K554	130 aa		10.24	□□□□□ -0.77
CACNA1C-231	ENST00000616390	INSL3	P51460	131 aa		10.24	□□□□□ -0.77
CACNA1C-231	ENST00000616390	TMEM170B	Q5T4T1	132 aa		10.24	□□□□□ -0.77
CACNA1C-231	ENST00000616390	TMEM89	A2RUT3	159 aa		10.24	□□□□□ -0.77
CACNA1C-231	ENST00000616390	RPL35A	P18077	110 aa	Known RBP	10.24	□□□□□ -0.77
CACNA1C-231	ENST00000616390	ETDB	Q3ZM63	59 aa		10.24	□□□□□ -0.77
CACNA1C-231	ENST00000616390	MORN3	Q6PF18	240 aa	Predicted RBP	10.24	□□□□□ -0.77
CACNA1C-231	ENST00000616390	SH2D6	Q7Z4S9	175 aa		10.24	□□□□□ -0.77
CACNA1C-231	ENST00000616390	PLEKHB2	Q96CS7	222 aa		10.23	□□□□□ -0.77
CACNA1C-231	ENST00000616390	TENM4	Q6N022	2769 aa		10.23	□□□□□ -0.77
CACNA1C-231	ENST00000616390		M0QY20	66 aa		10.23	□□□□□ -0.77
CACNA1C-231	ENST00000616390	LGALS9	O00182	355 aa		10.23	□□□□□ -0.77
CACNA1C-231	ENST00000616390	RPS28	P62857	69 aa	Known RBP	10.23	□□□□□ -0.77
CACNA1C-231	ENST00000616390	TMEM61	Q8N0U2	210 aa		10.23	□□□□□ -0.77
CACNA1C-231	ENST00000616390	MAL	P21145	153 aa		10.22	□□□□□ -0.77
CACNA1C-231	ENST00000616390	POM121L12	Q8N7R1	296 aa		10.22	□□□□□ -0.77
CACNA1C-231	ENST00000616390	LINC01587	Q99440	93 aa		10.22	□□□□□ -0.77
CACNA1C-231	ENST00000616390	EDA2R	Q9HAV5	297 aa		10.22	□□□□□ -0.77
CACNA1C-231	ENST00000616390	IGHV3-64	A0A075B6Q5	118 aa		10.22	□□□□□ -0.77
CACNA1C-231	ENST00000616390	IGIP	A6NJ69	53 aa		10.22	□□□□□ -0.77
CACNA1C-231	ENST00000616390	IFITM1	P13164	125 aa		10.22	□□□□□ -0.77
CACNA1C-231	ENST00000616390	C4orf26	Q17RF5	130 aa		10.22	□□□□□ -0.77
CACNA1C-231	ENST00000616390	SFTA2	Q6UW10	78 aa		10.22	□□□□□ -0.77
CACNA1C-231	ENST00000616390	AMTN	Q6UX39	209 aa		10.22	□□□□□ -0.77
CACNA1C-231	ENST00000616390	DLX4	Q92988	240 aa	Predicted RBP	10.22	□□□□□ -0.77
CACNA1C-231	ENST00000616390	FSHB	P01225	129 aa		10.21	□□□□□ -0.77
CACNA1C-231	ENST00000616390	SRSF9	Q13242	221 aa	Known RBP eCLIP	10.21	□□□□□ -0.77
CACNA1C-231	ENST00000616390	PMVK	Q15126	192 aa		10.21	□□□□□ -0.77
CACNA1C-231	ENST00000616390	C12orf74	Q32Q52	190 aa		10.21	□□□□□ -0.77
CACNA1C-231	ENST00000616390	DYNLRB2	Q8TF09	96 aa		10.21	□□□□□ -0.77
CACNA1C-231	ENST00000616390	IGLV4-69	A0A075B6H9	119 aa		10.21	□□□□□ -0.78
CACNA1C-231	ENST00000616390		A8MZ25	164 aa		10.21	□□□□□ -0.78
CACNA1C-231	ENST00000616390	LINC01619	G3V211	115 aa		10.21	□□□□□ -0.78
CACNA1C-231	ENST00000616390	C2CD3	Q4AC94	2353 aa		10.21	□□□□□ -0.78
CACNA1C-231	ENST00000616390		E9PLD3	99 aa		10.2	□□□□□ -0.78
CACNA1C-231	ENST00000616390	TTC32	Q5I0X7	151 aa		10.2	□□□□□ -0.78
CACNA1C-231	ENST00000616390	ODF3	Q96PU9	254 aa		10.2	□□□□□ -0.78
CACNA1C-231	ENST00000616390		Q9UF83	564 aa		10.2	□□□□□ -0.78
CACNA1C-231	ENST00000616390	PHLDA1	Q8WV24	401 aa	Predicted RBP	10.2	□□□□□ -0.78
CACNA1C-231	ENST00000616390	ITPR2	Q14571	2701 aa		10.2	□□□□□ -0.78
CACNA1C-231	ENST00000616390	IGHV3OR16-12	A0A075B7B8	117 aa		10.2	□□□□□ -0.78
CACNA1C-231	ENST00000616390	TRBV27	A0A0K0K1C4	114 aa		10.2	□□□□□ -0.78
CACNA1C-231	ENST00000616390	RBMY1B	A6NDE4	496 aa	Known RBP	10.19	□□□□□ -0.78
CACNA1C-231	ENST00000616390	RBMY1E	A6NEQ0	496 aa	Known RBP	10.19	□□□□□ -0.78
CACNA1C-231	ENST00000616390	RBMY1D	P0C7P1	496 aa	Known RBP	10.19	□□□□□ -0.78
CACNA1C-231	ENST00000616390	WFDC11	Q8NEX6	87 aa		10.19	□□□□□ -0.78
CACNA1C-231	ENST00000616390	TRGV11	A0A075B6L2	103 aa		10.19	□□□□□ -0.78
CACNA1C-231	ENST00000616390	IGLL5	B9A064	214 aa		10.19	□□□□□ -0.78
CACNA1C-231	ENST00000616390	FHL3	Q13643	280 aa		10.19	□□□□□ -0.78
CACNA1C-231	ENST00000616390	RNASE13	Q5GAN3	156 aa	Known RBP	10.19	□□□□□ -0.78
CACNA1C-231	ENST00000616390	TRPT1	Q86TN4	253 aa	Known RBP	10.19	□□□□□ -0.78
CACNA1C-231	ENST00000616390		H3BMM0	161 aa		10.18	□□□□□ -0.78
CACNA1C-231	ENST00000616390	HRCT1	Q6UXD1	115 aa		10.18	□□□□□ -0.78
CACNA1C-231	ENST00000616390	PKIG	Q9Y2B9	76 aa		10.18	□□□□□ -0.78
CACNA1C-231	ENST00000616390	TRBV7-3	A0A075B6L6	115 aa		10.18	□□□□□ -0.78
CACNA1C-231	ENST00000616390	C4orf48	Q5BLP8	95 aa		10.18	□□□□□ -0.78
CACNA1C-231	ENST00000616390	CEMP1	Q6PRD7	247 aa	Predicted RBP	10.18	□□□□□ -0.78
CACNA1C-231	ENST00000616390	FOXI1	Q12951	378 aa		10.17	□□□□□ -0.78
CACNA1C-231	ENST00000616390	GAGE2B	Q13066	116 aa		10.17	□□□□□ -0.78
CACNA1C-231	ENST00000616390	GAGE2E	Q4V326	116 aa		10.17	□□□□□ -0.78
CACNA1C-231	ENST00000616390	PEMT	Q9UBM1	199 aa		10.17	□□□□□ -0.78
CACNA1C-231	ENST00000616390	GAGE2D	Q9UEU5	116 aa		10.17	□□□□□ -0.78
CACNA1C-231	ENST00000616390		H3BMG7	143 aa		10.16	□□□□□ -0.78
CACNA1C-231	ENST00000616390	APOM	O95445	188 aa		10.16	□□□□□ -0.78
CACNA1C-231	ENST00000616390	TSPEAR-AS2	P59090	65 aa		10.16	□□□□□ -0.78
CACNA1C-231	ENST00000616390	HERVK_113	P61574	105 aa		10.16	□□□□□ -0.78
CACNA1C-231	ENST00000616390	TMEM86B	Q8N661	226 aa		10.16	□□□□□ -0.78
CACNA1C-231	ENST00000616390	C3orf56	Q8N813	242 aa		10.16	□□□□□ -0.78
CACNA1C-231	ENST00000616390	TMEM141	Q96I45	108 aa		10.16	□□□□□ -0.78
CACNA1C-231	ENST00000616390		I3L3M4	83 aa		10.16	□□□□□ -0.78
CACNA1C-231	ENST00000616390	XCL2	Q9UBD3	114 aa		10.16	□□□□□ -0.78
CACNA1C-231	ENST00000616390	IGHV3-38	A0A0C4DH36	116 aa		10.15	□□□□□ -0.78
CACNA1C-231	ENST00000616390	TRBV6-5	A0A0K0K1A5	114 aa		10.15	□□□□□ -0.78
CACNA1C-231	ENST00000616390	TAL2	Q16559	108 aa		10.15	□□□□□ -0.78
CACNA1C-231	ENST00000616390	TIMM17A	Q99595	171 aa		10.15	□□□□□ -0.78
CACNA1C-231	ENST00000616390	MAP6D1	Q9H9H5	199 aa		10.15	□□□□□ -0.78
CACNA1C-231	ENST00000616390	SETX	Q7Z333	2677 aa	Known RBP	10.15	□□□□□ -0.78
CACNA1C-231	ENST00000616390		Q6ZSN1	163 aa		10.15	□□□□□ -0.78
CACNA1C-231	ENST00000616390		Q6ZSV7	163 aa		10.15	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms