RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 BAGE3Q86Y29 109 aa5.55□□□□□ -1.52
PCDH9-205ENST00000614931 ICOSQ9Y6W8 199 aa5.55□□□□□ -1.52
PCDH9-205ENST00000614931 H3BNG1 76 aa5.54□□□□□ -1.52
PCDH9-205ENST00000614931 VCYO14598 125 aa5.54□□□□□ -1.52
PCDH9-205ENST00000614931 NUDT3O95989 172 aa5.54□□□□□ -1.52
PCDH9-205ENST00000614931 PMCHP20382 165 aa5.54□□□□□ -1.52
PCDH9-205ENST00000614931 PMCHL1Q16048 86 aa5.54□□□□□ -1.52
PCDH9-205ENST00000614931 FA2HQ7L5A8 372 aa5.54□□□□□ -1.52
PCDH9-205ENST00000614931 ATP6V0E2Q8NHE4 81 aa5.54□□□□□ -1.52
PCDH9-205ENST00000614931 PRSS3P2Q8NHM4 247 aa5.54□□□□□ -1.52
PCDH9-205ENST00000614931 CHCHD7Q9BUK0 85 aa5.54□□□□□ -1.52
PCDH9-205ENST00000614931 NXT2Q9NPJ8 142 aaKnown RBP5.54□□□□□ -1.52
PCDH9-205ENST00000614931 APLNQ9ULZ1 77 aa5.54□□□□□ -1.52
PCDH9-205ENST00000614931 LYSTQ99698 3801 aa5.54□□□□□ -1.52
PCDH9-205ENST00000614931 IGLL5B9A064 214 aa5.53□□□□□ -1.52
PCDH9-205ENST00000614931 I3L3M4 83 aa5.53□□□□□ -1.52
PCDH9-205ENST00000614931 LINC00614P0C842 121 aa5.53□□□□□ -1.52
PCDH9-205ENST00000614931 ESDP10768 282 aa5.53□□□□□ -1.52
PCDH9-205ENST00000614931 MRPL23Q16540 153 aaKnown RBP5.53□□□□□ -1.52
PCDH9-205ENST00000614931 DAZ4Q86SG3 579 aaKnown RBP5.53□□□□□ -1.52
PCDH9-205ENST00000614931 FAM19A2Q8N3H0 131 aa5.53□□□□□ -1.52
PCDH9-205ENST00000614931 DAZ3Q9NR90 486 aaKnown RBP5.53□□□□□ -1.52
PCDH9-205ENST00000614931 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.52□□□□□ -1.53
PCDH9-205ENST00000614931 IGHV1-24A0A0C4DH33 117 aa5.52□□□□□ -1.53
PCDH9-205ENST00000614931 IGKV2-29A2NJV5 120 aaPredicted RBP5.52□□□□□ -1.53
PCDH9-205ENST00000614931 C5orf52A6NGY3 159 aa5.52□□□□□ -1.53
PCDH9-205ENST00000614931 IFITM10A6NMD0 228 aa5.52□□□□□ -1.53
PCDH9-205ENST00000614931 SNRPEP62304 92 aaKnown RBP5.52□□□□□ -1.53
PCDH9-205ENST00000614931 RPL39P62891 51 aaKnown RBP5.52□□□□□ -1.53
PCDH9-205ENST00000614931 COTL1Q14019 142 aa5.52□□□□□ -1.53
PCDH9-205ENST00000614931 LAGE3Q14657 143 aa5.52□□□□□ -1.53
PCDH9-205ENST00000614931 PDZD11Q5EBL8 140 aa5.52□□□□□ -1.53
PCDH9-205ENST00000614931 LINC00173Q6ZV60 143 aa5.52□□□□□ -1.53
PCDH9-205ENST00000614931 HIST3H2BBQ8N257 126 aa5.52□□□□□ -1.53
PCDH9-205ENST00000614931 CHCHD1Q96BP2 118 aaKnown RBP5.52□□□□□ -1.53
PCDH9-205ENST00000614931 AP5S1Q9NUS5 200 aa5.52□□□□□ -1.53
PCDH9-205ENST00000614931 HYDINQ4G0P3 5121 aa5.52□□□□□ -1.53
PCDH9-205ENST00000614931 TRBV6-8A0A0A6YYG3 113 aa5.51□□□□□ -1.53
PCDH9-205ENST00000614931 FCER1GP30273 86 aa5.51□□□□□ -1.53
PCDH9-205ENST00000614931 AMTP48728 403 aa5.51□□□□□ -1.53
PCDH9-205ENST00000614931 ESRGQ1W209 222 aa5.51□□□□□ -1.53
PCDH9-205ENST00000614931 LYPD5Q6UWN5 251 aa5.51□□□□□ -1.53
PCDH9-205ENST00000614931 Q8N3U1 123 aa5.51□□□□□ -1.53
PCDH9-205ENST00000614931 C15orf53Q8NAA6 179 aa5.51□□□□□ -1.53
PCDH9-205ENST00000614931 FAM104AQ969W3 186 aa5.51□□□□□ -1.53
PCDH9-205ENST00000614931 KIR2DL4Q99706 377 aa5.51□□□□□ -1.53
PCDH9-205ENST00000614931 GTSF1LQ9H1H1 148 aa5.51□□□□□ -1.53
PCDH9-205ENST00000614931 DNAH1Q9P2D7 4330 aa5.5□□□□□ -1.53
PCDH9-205ENST00000614931 HSBP1O75506 76 aa5.5□□□□□ -1.53
PCDH9-205ENST00000614931 S100A6P06703 90 aa5.5□□□□□ -1.53
PCDH9-205ENST00000614931 TIRAPP58753 221 aa5.5□□□□□ -1.53
PCDH9-205ENST00000614931 ORMDL2Q53FV1 153 aa5.5□□□□□ -1.53
PCDH9-205ENST00000614931 C2orf66Q6UXQ4 117 aa5.5□□□□□ -1.53
PCDH9-205ENST00000614931 C20orf203Q8NBC4 194 aa5.5□□□□□ -1.53
PCDH9-205ENST00000614931 TRBV25-1A0A075B6N4 114 aa5.49□□□□□ -1.53
PCDH9-205ENST00000614931 K7EMI3 77 aa5.49□□□□□ -1.53
PCDH9-205ENST00000614931 HBDP02042 147 aa5.49□□□□□ -1.53
PCDH9-205ENST00000614931 BTF3P20290 206 aaKnown RBP5.49□□□□□ -1.53
PCDH9-205ENST00000614931 GAGE6Q13070 117 aa5.49□□□□□ -1.53
PCDH9-205ENST00000614931 LELP1Q5T871 98 aa5.49□□□□□ -1.53
PCDH9-205ENST00000614931 SH2D6Q7Z4S9 175 aa5.49□□□□□ -1.53
PCDH9-205ENST00000614931 WFDC10BQ8IUB3 73 aa5.49□□□□□ -1.53
PCDH9-205ENST00000614931 TOMM6Q96B49 74 aa5.49□□□□□ -1.53
PCDH9-205ENST00000614931 TMEM243Q9BU79 118 aa5.49□□□□□ -1.53
PCDH9-205ENST00000614931 LINC00588Q9Y4M8 146 aa5.49□□□□□ -1.53
PCDH9-205ENST00000614931 PLECQ15149 4684 aaKnown RBP5.49□□□□□ -1.53
PCDH9-205ENST00000614931 EPPK1P58107 5090 aaKnown RBP5.48□□□□□ -1.53
PCDH9-205ENST00000614931 TMEM97Q5BJF2 176 aa5.48□□□□□ -1.53
PCDH9-205ENST00000614931 ZC2HC1BQ5TFG8 222 aa5.48□□□□□ -1.53
PCDH9-205ENST00000614931 HIST1H2BLQ99880 126 aa5.48□□□□□ -1.53
PCDH9-205ENST00000614931 OPRPNQ99935 248 aaPredicted RBP5.48□□□□□ -1.53
PCDH9-205ENST00000614931 CYSLTR1Q9Y271 337 aa5.48□□□□□ -1.53
PCDH9-205ENST00000614931 UBE2D4Q9Y2X8 147 aa5.48□□□□□ -1.53
PCDH9-205ENST00000614931 VPS13DQ5THJ4 4388 aa5.48□□□□□ -1.53
PCDH9-205ENST00000614931 ALMS1Q8TCU4 4167 aa5.48□□□□□ -1.53
PCDH9-205ENST00000614931 IGLV4-60A0A075B6I1 120 aa5.47□□□□□ -1.53
PCDH9-205ENST00000614931 IGIPA6NJ69 53 aa5.47□□□□□ -1.53
PCDH9-205ENST00000614931 FGF6P10767 208 aa5.47□□□□□ -1.53
PCDH9-205ENST00000614931 FABP4P15090 132 aa5.47□□□□□ -1.53
PCDH9-205ENST00000614931 MPV17L2Q567V2 206 aa5.47□□□□□ -1.53
PCDH9-205ENST00000614931 RNASE13Q5GAN3 156 aaKnown RBP5.47□□□□□ -1.53
PCDH9-205ENST00000614931 Q6ZUT4 128 aa5.47□□□□□ -1.53
PCDH9-205ENST00000614931 SPATA12Q7Z6I5 190 aa5.47□□□□□ -1.53
PCDH9-205ENST00000614931 CHCHD5Q9BSY4 110 aa5.47□□□□□ -1.53
PCDH9-205ENST00000614931 MRPS16Q9Y3D3 137 aaKnown RBP5.47□□□□□ -1.53
PCDH9-205ENST00000614931 IGLV4-3A0A075B6K6 122 aa5.46□□□□□ -1.54
PCDH9-205ENST00000614931 RBX1P62877 108 aa5.46□□□□□ -1.54
PCDH9-205ENST00000614931 MRPL52Q86TS9 123 aaKnown RBP5.46□□□□□ -1.54
PCDH9-205ENST00000614931 Q8N976 141 aa5.46□□□□□ -1.54
PCDH9-205ENST00000614931 SCGB3A1Q96QR1 104 aa5.46□□□□□ -1.54
PCDH9-205ENST00000614931 TIMM21Q9BVV7 248 aa5.46□□□□□ -1.54
PCDH9-205ENST00000614931 DNAH6Q9C0G6 4158 aa5.45□□□□□ -1.54
PCDH9-205ENST00000614931 UBE2L6O14933 153 aa5.45□□□□□ -1.54
PCDH9-205ENST00000614931 LEPROTL1O95214 131 aa5.45□□□□□ -1.54
PCDH9-205ENST00000614931 ERASQ7Z444 233 aa5.45□□□□□ -1.54
PCDH9-205ENST00000614931 TMEM18Q96B42 140 aa5.45□□□□□ -1.54
PCDH9-205ENST00000614931 IFI27L1Q96BM0 104 aa5.45□□□□□ -1.54
PCDH9-205ENST00000614931 PACRGQ96M98 296 aaPredicted RBP5.45□□□□□ -1.54
PCDH9-205ENST00000614931 TIMM17AQ99595 171 aa5.45□□□□□ -1.54
PCDH9-205ENST00000614931 SPANXA1Q9NS26 97 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms