RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 OR5AL1P0C617 328 aa7.17□□□□□ -1.26
PDLIM1P1-201ENST00000604187 SUMO4Q6EEV6 95 aa7.17□□□□□ -1.26
PDLIM1P1-201ENST00000604187 LINC00526Q96FQ7 95 aa7.17□□□□□ -1.26
PDLIM1P1-201ENST00000604187 CARD19Q96LW7 228 aa7.17□□□□□ -1.26
PDLIM1P1-201ENST00000604187 NKX6-2Q9C056 277 aaPredicted RBP7.17□□□□□ -1.26
PDLIM1P1-201ENST00000604187 TNFSF18Q9UNG2 199 aa7.17□□□□□ -1.26
PDLIM1P1-201ENST00000604187 MT-ND6P03923 174 aa7.16□□□□□ -1.26
PDLIM1P1-201ENST00000604187 AMTP48728 403 aa7.16□□□□□ -1.26
PDLIM1P1-201ENST00000604187 INMT-MINDY4F8WBC2 141 aa7.15□□□□□ -1.26
PDLIM1P1-201ENST00000604187 AKR1C3P42330 323 aa7.15□□□□□ -1.26
PDLIM1P1-201ENST00000604187 PGLYRP4Q96LB8 373 aa7.15□□□□□ -1.26
PDLIM1P1-201ENST00000604187 CTXND1A0A1B0GTU2 59 aa7.14□□□□□ -1.27
PDLIM1P1-201ENST00000604187 PTTG1IPP53801 180 aa7.14□□□□□ -1.27
PDLIM1P1-201ENST00000604187 FOXI1Q12951 378 aa7.14□□□□□ -1.27
PDLIM1P1-201ENST00000604187 C1orf137Q5JT78 98 aa7.14□□□□□ -1.27
PDLIM1P1-201ENST00000604187 A0A1W2PNN7 141 aa7.13□□□□□ -1.27
PDLIM1P1-201ENST00000604187 XCL1P47992 114 aa7.13□□□□□ -1.27
PDLIM1P1-201ENST00000604187 GAGE2BQ13066 116 aa7.13□□□□□ -1.27
PDLIM1P1-201ENST00000604187 COTL1Q14019 142 aa7.13□□□□□ -1.27
PDLIM1P1-201ENST00000604187 AMMECR1LQ6DCA0 310 aa7.13□□□□□ -1.27
PDLIM1P1-201ENST00000604187 RASL11AQ6T310 242 aa7.13□□□□□ -1.27
PDLIM1P1-201ENST00000604187 STOML3Q8TAV4 291 aa7.13□□□□□ -1.27
PDLIM1P1-201ENST00000604187 DIRC1Q969H9 104 aa7.13□□□□□ -1.27
PDLIM1P1-201ENST00000604187 TCEAL7Q9BRU2 100 aa7.13□□□□□ -1.27
PDLIM1P1-201ENST00000604187 TPPP3Q9BW30 176 aa7.13□□□□□ -1.27
PDLIM1P1-201ENST00000604187 H3BS24 57 aa7.12□□□□□ -1.27
PDLIM1P1-201ENST00000604187 SYCNQ0VAF6 134 aa7.12□□□□□ -1.27
PDLIM1P1-201ENST00000604187 CST9LP1Q5W188 147 aa7.12□□□□□ -1.27
PDLIM1P1-201ENST00000604187 FER1L6-AS1Q8NA97 138 aa7.12□□□□□ -1.27
PDLIM1P1-201ENST00000604187 IGHV1-58A0A0C4DH39 117 aa7.11□□□□□ -1.27
PDLIM1P1-201ENST00000604187 IGLV1-50A0A075B6I6 118 aa7.1□□□□□ -1.27
PDLIM1P1-201ENST00000604187 LOC107984640A0A0U1RRK4 108 aa7.1□□□□□ -1.27
PDLIM1P1-201ENST00000604187 MAP1LC3B2A6NCE7 125 aa7.1□□□□□ -1.27
PDLIM1P1-201ENST00000604187 H0Y9J4 135 aa7.1□□□□□ -1.27
PDLIM1P1-201ENST00000604187 IGLV7-43P04211 117 aa7.1□□□□□ -1.27
PDLIM1P1-201ENST00000604187 C9orf116Q5BN46 136 aaPredicted RBP7.1□□□□□ -1.27
PDLIM1P1-201ENST00000604187 RPL7L1Q6DKI1 246 aaKnown RBP7.1□□□□□ -1.27
PDLIM1P1-201ENST00000604187 RNASEKQ6P5S7 137 aaKnown RBP7.1□□□□□ -1.27
PDLIM1P1-201ENST00000604187 MAP1LC3BQ9GZQ8 125 aa7.1□□□□□ -1.27
PDLIM1P1-201ENST00000604187 MED28Q9H204 178 aa7.1□□□□□ -1.27
PDLIM1P1-201ENST00000604187 NIT2Q9NQR4 276 aa7.1□□□□□ -1.27
PDLIM1P1-201ENST00000604187 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.09□□□□□ -1.27
PDLIM1P1-201ENST00000604187 IGKV2-29A2NJV5 120 aaPredicted RBP7.09□□□□□ -1.27
PDLIM1P1-201ENST00000604187 ZNF561-AS1K7EIQ3 104 aa7.09□□□□□ -1.27
PDLIM1P1-201ENST00000604187 CCL25O15444 150 aa7.09□□□□□ -1.27
PDLIM1P1-201ENST00000604187 BCL2P10415 239 aa7.09□□□□□ -1.27
PDLIM1P1-201ENST00000604187 FHITP49789 147 aa7.09□□□□□ -1.27
PDLIM1P1-201ENST00000604187 CAMPP49913 170 aa7.09□□□□□ -1.27
PDLIM1P1-201ENST00000604187 PHF5AQ7RTV0 110 aaKnown RBP7.09□□□□□ -1.27
PDLIM1P1-201ENST00000604187 BAGE2Q86Y30 109 aa7.09□□□□□ -1.27
PDLIM1P1-201ENST00000604187 ANAPC16Q96DE5 110 aa7.09□□□□□ -1.27
PDLIM1P1-201ENST00000604187 MARVELD1Q9BSK0 173 aa7.09□□□□□ -1.27
PDLIM1P1-201ENST00000604187 MLST8Q9BVC4 326 aa7.09□□□□□ -1.27
PDLIM1P1-201ENST00000604187 FGF6P10767 208 aa7.08□□□□□ -1.28
PDLIM1P1-201ENST00000604187 UBE2D1P51668 147 aa7.08□□□□□ -1.28
PDLIM1P1-201ENST00000604187 AKR1C8PQ5T2L2 129 aa7.08□□□□□ -1.28
PDLIM1P1-201ENST00000604187 S100A9P06702 114 aaKnown RBP7.07□□□□□ -1.28
PDLIM1P1-201ENST00000604187 KRTAP1-4P0C5Y4 121 aa7.07□□□□□ -1.28
PDLIM1P1-201ENST00000604187 IGLC6P0CF74 106 aa7.07□□□□□ -1.28
PDLIM1P1-201ENST00000604187 NTF3P20783 257 aa7.07□□□□□ -1.28
PDLIM1P1-201ENST00000604187 EIF5AP63241 154 aaKnown RBP7.07□□□□□ -1.28
PDLIM1P1-201ENST00000604187 Q6ZNX1 250 aa7.07□□□□□ -1.28
PDLIM1P1-201ENST00000604187 BORCS7-ASMTA0A0B4J1R7 106 aa7.06□□□□□ -1.28
PDLIM1P1-201ENST00000604187 LINC00959A0A1B0GUT2 108 aa7.06□□□□□ -1.28
PDLIM1P1-201ENST00000604187 PAGE4O60829 102 aa7.06□□□□□ -1.28
PDLIM1P1-201ENST00000604187 UPK1BO75841 260 aa7.06□□□□□ -1.28
PDLIM1P1-201ENST00000604187 APOMO95445 188 aa7.06□□□□□ -1.28
PDLIM1P1-201ENST00000604187 OR5A1Q8NGJ0 315 aa7.06□□□□□ -1.28
PDLIM1P1-201ENST00000604187 ISOC2Q96AB3 205 aa7.06□□□□□ -1.28
PDLIM1P1-201ENST00000604187 IGLV4-69A0A075B6H9 119 aa7.05□□□□□ -1.28
PDLIM1P1-201ENST00000604187 A0A087WZ39 114 aa7.05□□□□□ -1.28
PDLIM1P1-201ENST00000604187 TRAV1-1A0A0B4J248 108 aa7.05□□□□□ -1.28
PDLIM1P1-201ENST00000604187 APCSP02743 223 aa7.05□□□□□ -1.28
PDLIM1P1-201ENST00000604187 IFITM3Q01628 133 aa7.05□□□□□ -1.28
PDLIM1P1-201ENST00000604187 RPL18AQ02543 176 aaKnown RBP7.05□□□□□ -1.28
PDLIM1P1-201ENST00000604187 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.04□□□□□ -1.28
PDLIM1P1-201ENST00000604187 H7C423 109 aa7.04□□□□□ -1.28
PDLIM1P1-201ENST00000604187 TRGC1P0CF51 173 aa7.04□□□□□ -1.28
PDLIM1P1-201ENST00000604187 RPL13AP40429 203 aaKnown RBP7.04□□□□□ -1.28
PDLIM1P1-201ENST00000604187 DEFA1P59665 94 aa7.04□□□□□ -1.28
PDLIM1P1-201ENST00000604187 MEF2BQ02080 365 aaPredicted RBP7.04□□□□□ -1.28
PDLIM1P1-201ENST00000604187 KRTAP11-1Q8IUC1 163 aa7.04□□□□□ -1.28
PDLIM1P1-201ENST00000604187 NUP35Q8NFH5 326 aa7.04□□□□□ -1.28
PDLIM1P1-201ENST00000604187 OR2D3Q8NGH3 330 aa7.04□□□□□ -1.28
PDLIM1P1-201ENST00000604187 CAMK2N2Q96S95 79 aa7.04□□□□□ -1.28
PDLIM1P1-201ENST00000604187 PFDN1O60925 122 aa7.03□□□□□ -1.28
PDLIM1P1-201ENST00000604187 TSPAN13O95857 204 aa7.03□□□□□ -1.28
PDLIM1P1-201ENST00000604187 NCR2O95944 276 aa7.03□□□□□ -1.28
PDLIM1P1-201ENST00000604187 ZNF25P17030 456 aaPredicted RBP7.03□□□□□ -1.28
PDLIM1P1-201ENST00000604187 CD164L2Q6UWJ8 174 aa7.03□□□□□ -1.28
PDLIM1P1-201ENST00000604187 TMEM101Q96IK0 257 aa7.03□□□□□ -1.28
PDLIM1P1-201ENST00000604187 BTF3L4Q96K17 158 aa7.03□□□□□ -1.28
PDLIM1P1-201ENST00000604187 MUC17Q685J3 4493 aa7.03□□□□□ -1.28
PDLIM1P1-201ENST00000604187 A0A1B0GV50 99 aa7.02□□□□□ -1.29
PDLIM1P1-201ENST00000604187 RPS20P60866 119 aaKnown RBP7.02□□□□□ -1.29
PDLIM1P1-201ENST00000604187 SS18Q15532 418 aa7.02□□□□□ -1.29
PDLIM1P1-201ENST00000604187 Q5BKY6 102 aa7.02□□□□□ -1.29
PDLIM1P1-201ENST00000604187 GATD1Q8NB37 220 aa7.02□□□□□ -1.29
PDLIM1P1-201ENST00000604187 S100ZQ8WXG8 99 aa7.02□□□□□ -1.29
PDLIM1P1-201ENST00000604187 F2Z2F3 143 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms