RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 TMSB15BA0A087X1C1 80 aa3.65□□□□□ -1.83
DNMT1-222ENST00000590619 TRAV34A0A0B4J273 112 aa3.65□□□□□ -1.83
DNMT1-222ENST00000590619 KRTAP4-16G5E9R7 235 aaPredicted RBP3.65□□□□□ -1.83
DNMT1-222ENST00000590619 K7EQM0 130 aa3.65□□□□□ -1.83
DNMT1-222ENST00000590619 PLA2G10O15496 165 aa3.65□□□□□ -1.83
DNMT1-222ENST00000590619 XCL1P47992 114 aa3.65□□□□□ -1.83
DNMT1-222ENST00000590619 CAMPP49913 170 aa3.65□□□□□ -1.83
DNMT1-222ENST00000590619 SUMO1P63165 101 aaKnown RBP3.65□□□□□ -1.83
DNMT1-222ENST00000590619 IL15RAQ13261 267 aa3.65□□□□□ -1.83
DNMT1-222ENST00000590619 MZT2BQ6NZ67 158 aa3.65□□□□□ -1.83
DNMT1-222ENST00000590619 STX12Q86Y82 276 aa3.65□□□□□ -1.83
DNMT1-222ENST00000590619 TOMM5Q8N4H5 51 aa3.65□□□□□ -1.83
DNMT1-222ENST00000590619 ENKURQ8TC29 256 aa3.65□□□□□ -1.83
DNMT1-222ENST00000590619 WDR61Q9GZS3 305 aaKnown RBP3.65□□□□□ -1.83
DNMT1-222ENST00000590619 WFDC1Q9HC57 220 aa3.65□□□□□ -1.83
DNMT1-222ENST00000590619 M0QY20 66 aa3.64□□□□□ -1.83
DNMT1-222ENST00000590619 M0R2T5 61 aa3.64□□□□□ -1.83
DNMT1-222ENST00000590619 UBE2L6O14933 153 aa3.64□□□□□ -1.83
DNMT1-222ENST00000590619 LYRM1O43325 122 aa3.64□□□□□ -1.83
DNMT1-222ENST00000590619 SH2D1AO60880 128 aa3.64□□□□□ -1.83
DNMT1-222ENST00000590619 PVALBP20472 110 aaPredicted RBP3.64□□□□□ -1.83
DNMT1-222ENST00000590619 RPL18AQ02543 176 aaKnown RBP3.64□□□□□ -1.83
DNMT1-222ENST00000590619 RNF151Q2KHN1 245 aa3.64□□□□□ -1.83
DNMT1-222ENST00000590619 PQLC2Q6ZP29 291 aa3.64□□□□□ -1.83
DNMT1-222ENST00000590619 LINC00304Q8N9R0 145 aa3.64□□□□□ -1.83
DNMT1-222ENST00000590619 C5orf17Q8NAS9 161 aa3.64□□□□□ -1.83
DNMT1-222ENST00000590619 OR5A1Q8NGJ0 315 aa3.64□□□□□ -1.83
DNMT1-222ENST00000590619 ISOC2Q96AB3 205 aa3.64□□□□□ -1.83
DNMT1-222ENST00000590619 ARL2-SNX15V9GYD0 113 aa3.64□□□□□ -1.83
DNMT1-222ENST00000590619 MUC21A0A140T8X8 626 aa3.63□□□□□ -1.83
DNMT1-222ENST00000590619 FAM240BA0A1B0GVZ2 78 aa3.63□□□□□ -1.83
DNMT1-222ENST00000590619 CENPXA8MT69 81 aa3.63□□□□□ -1.83
DNMT1-222ENST00000590619 FAM25EA8MYX2 175 aa3.63□□□□□ -1.83
DNMT1-222ENST00000590619 C17orf112F2Z3M2 114 aa3.63□□□□□ -1.83
DNMT1-222ENST00000590619 HMGB3O15347 200 aaKnown RBP3.63□□□□□ -1.83
DNMT1-222ENST00000590619 CCL25O15444 150 aa3.63□□□□□ -1.83
DNMT1-222ENST00000590619 NKX2-5P52952 324 aaPredicted RBP3.63□□□□□ -1.83
DNMT1-222ENST00000590619 AP3S2P59780 193 aa3.63□□□□□ -1.83
DNMT1-222ENST00000590619 SSTP61278 116 aa3.63□□□□□ -1.83
DNMT1-222ENST00000590619 AKAP14Q86UN6 197 aa3.63□□□□□ -1.83
DNMT1-222ENST00000590619 KRTAP19-1Q8IUB9 90 aa3.63□□□□□ -1.83
DNMT1-222ENST00000590619 OR10AG1Q8NH19 301 aa3.63□□□□□ -1.83
DNMT1-222ENST00000590619 LINC00959A0A1B0GUT2 108 aa3.62□□□□□ -1.83
DNMT1-222ENST00000590619 NDUFB6O95139 128 aa3.62□□□□□ -1.83
DNMT1-222ENST00000590619 BTCP35070 178 aa3.62□□□□□ -1.83
DNMT1-222ENST00000590619 UBE2BP63146 152 aa3.62□□□□□ -1.83
DNMT1-222ENST00000590619 CTAG1AP78358 180 aa3.62□□□□□ -1.83
DNMT1-222ENST00000590619 RAB32Q13637 225 aa3.62□□□□□ -1.83
DNMT1-222ENST00000590619 COX8CQ7Z4L0 72 aa3.62□□□□□ -1.83
DNMT1-222ENST00000590619 FAM19A5Q7Z5A7 132 aaPredicted RBP3.62□□□□□ -1.83
DNMT1-222ENST00000590619 PGLYRP4Q96LB8 373 aa3.62□□□□□ -1.83
DNMT1-222ENST00000590619 CAMK2N2Q96S95 79 aa3.62□□□□□ -1.83
DNMT1-222ENST00000590619 MED28Q9H204 178 aa3.62□□□□□ -1.83
DNMT1-222ENST00000590619 KCNIP2Q9NS61 270 aa3.62□□□□□ -1.83
DNMT1-222ENST00000590619 FLGP20930 4061 aaPredicted RBP3.62□□□□□ -1.83
DNMT1-222ENST00000590619 A0A1W2PPV4 95 aa3.61□□□□□ -1.83
DNMT1-222ENST00000590619 NAP1L6A6NFF2 107 aa3.61□□□□□ -1.83
DNMT1-222ENST00000590619 INMT-MINDY4F8WBC2 141 aa3.61□□□□□ -1.83
DNMT1-222ENST00000590619 ESDP10768 282 aa3.61□□□□□ -1.83
DNMT1-222ENST00000590619 SS18Q15532 418 aa3.61□□□□□ -1.83
DNMT1-222ENST00000590619 LINC00242Q5T6M2 205 aa3.61□□□□□ -1.83
DNMT1-222ENST00000590619 CD164L2Q6UWJ8 174 aa3.61□□□□□ -1.83
DNMT1-222ENST00000590619 FP248Q71RG6 208 aaPredicted RBP3.61□□□□□ -1.83
DNMT1-222ENST00000590619 MARVELD1Q9BSK0 173 aa3.61□□□□□ -1.83
DNMT1-222ENST00000590619 ALG5Q9Y673 324 aa3.61□□□□□ -1.83
DNMT1-222ENST00000590619 C19orf71A6NCJ1 209 aa3.6□□□□□ -1.83
DNMT1-222ENST00000590619 BCL2L11O43521 198 aa3.6□□□□□ -1.83
DNMT1-222ENST00000590619 ARL14EPLP0DKL9 152 aa3.6□□□□□ -1.83
DNMT1-222ENST00000590619 AMMECR1LQ6DCA0 310 aa3.6□□□□□ -1.83
DNMT1-222ENST00000590619 SUMO4Q6EEV6 95 aa3.6□□□□□ -1.83
DNMT1-222ENST00000590619 RNASEKQ6P5S7 137 aaKnown RBP3.6□□□□□ -1.83
DNMT1-222ENST00000590619 DEDD2Q8WXF8 326 aa3.6□□□□□ -1.83
DNMT1-222ENST00000590619 C2orf48Q96LS8 159 aa3.6□□□□□ -1.83
DNMT1-222ENST00000590619 NUDT15Q9NV35 164 aa3.6□□□□□ -1.83
DNMT1-222ENST00000590619 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.59□□□□□ -1.83
DNMT1-222ENST00000590619 IGKV2-29A2NJV5 120 aaPredicted RBP3.59□□□□□ -1.83
DNMT1-222ENST00000590619 A6NJY4 79 aa3.59□□□□□ -1.83
DNMT1-222ENST00000590619 M0QXV9 152 aa3.59□□□□□ -1.83
DNMT1-222ENST00000590619 SNAI2O43623 268 aa3.59□□□□□ -1.83
DNMT1-222ENST00000590619 H2AFB2P0C5Z0 115 aa3.59□□□□□ -1.83
DNMT1-222ENST00000590619 STAG3L2P0CL84 134 aa3.59□□□□□ -1.83
DNMT1-222ENST00000590619 STAG3L3P0CL85 134 aa3.59□□□□□ -1.83
DNMT1-222ENST00000590619 SMIM17P0DL12 118 aa3.59□□□□□ -1.83
DNMT1-222ENST00000590619 GCHFRP30047 84 aa3.59□□□□□ -1.83
DNMT1-222ENST00000590619 COTL1Q14019 142 aa3.59□□□□□ -1.83
DNMT1-222ENST00000590619 SPANXN1Q5VSR9 72 aa3.59□□□□□ -1.83
DNMT1-222ENST00000590619 CTDSP1Q9GZU7 261 aa3.59□□□□□ -1.83
DNMT1-222ENST00000590619 NIT2Q9NQR4 276 aa3.59□□□□□ -1.83
DNMT1-222ENST00000590619 KRTAP6-3Q3LI67 103 aa3.58□□□□□ -1.84
DNMT1-222ENST00000590619 GAGE2EQ4V326 116 aa3.58□□□□□ -1.84
DNMT1-222ENST00000590619 XP32Q5T750 250 aa3.58□□□□□ -1.84
DNMT1-222ENST00000590619 RASL11AQ6T310 242 aa3.58□□□□□ -1.84
DNMT1-222ENST00000590619 Q86TA4 180 aa3.58□□□□□ -1.84
DNMT1-222ENST00000590619 TCTE3Q8IZS6 198 aa3.58□□□□□ -1.84
DNMT1-222ENST00000590619 IMMP2LQ96T52 175 aa3.58□□□□□ -1.84
DNMT1-222ENST00000590619 GAGE2DQ9UEU5 116 aa3.58□□□□□ -1.84
DNMT1-222ENST00000590619 ZFP30Q9Y2G7 519 aa3.58□□□□□ -1.84
DNMT1-222ENST00000590619 H0YIZ8 118 aa3.57□□□□□ -1.84
DNMT1-222ENST00000590619 H7C423 109 aa3.57□□□□□ -1.84
DNMT1-222ENST00000590619 SSNA1O43805 119 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms