RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 UNQ9165/PRO28630Q6UXU0 137 aa11.02□□□□□ -0.65
SMARCA4-214ENST00000589677 CCDC140Q96MF4 163 aa11.02□□□□□ -0.65
SMARCA4-214ENST00000589677 NCOA6Q14686 2063 aaPredicted RBP11.02□□□□□ -0.65
SMARCA4-214ENST00000589677 MED13Q9UHV7 2174 aa11.02□□□□□ -0.65
SMARCA4-214ENST00000589677 IGHV4-59P01825 116 aa11.02□□□□□ -0.65
SMARCA4-214ENST00000589677 COX7BP24311 80 aa11.01□□□□□ -0.65
SMARCA4-214ENST00000589677 DEFB112Q30KQ8 113 aa11.01□□□□□ -0.65
SMARCA4-214ENST00000589677 LINC00526Q96FQ7 95 aa11.01□□□□□ -0.65
SMARCA4-214ENST00000589677 DOPEY2Q9Y3R5 2298 aa11.01□□□□□ -0.65
SMARCA4-214ENST00000589677 IGLV10-54A0A075B6I4 117 aa11.01□□□□□ -0.65
SMARCA4-214ENST00000589677 BLCAPP62952 87 aa11.01□□□□□ -0.65
SMARCA4-214ENST00000589677 PIK3CD-AS1Q5SR53 167 aa11.01□□□□□ -0.65
SMARCA4-214ENST00000589677 SLURP1P55000 103 aa11□□□□□ -0.65
SMARCA4-214ENST00000589677 C2orf16Q68DN1 1984 aa11□□□□□ -0.65
SMARCA4-214ENST00000589677 M0QY20 66 aa11□□□□□ -0.65
SMARCA4-214ENST00000589677 Q6JHZ5 121 aa11□□□□□ -0.65
SMARCA4-214ENST00000589677 CNFNQ9BYD5 112 aa11□□□□□ -0.65
SMARCA4-214ENST00000589677 ZFHX2Q9C0A1 2572 aaPredicted RBP11□□□□□ -0.65
SMARCA4-214ENST00000589677 IBA57-AS1B1ANH7 110 aa11□□□□□ -0.65
SMARCA4-214ENST00000589677 MRPS36P82909 103 aaKnown RBP11□□□□□ -0.65
SMARCA4-214ENST00000589677 CREBBPQ92793 2442 aa11□□□□□ -0.65
SMARCA4-214ENST00000589677 CHKB-CPT1BH3BT56 60 aa10.99□□□□□ -0.65
SMARCA4-214ENST00000589677 UBE2D1P51668 147 aa10.99□□□□□ -0.65
SMARCA4-214ENST00000589677 UBE2D3P61077 147 aa10.99□□□□□ -0.65
SMARCA4-214ENST00000589677 UBE2D2P62837 147 aa10.99□□□□□ -0.65
SMARCA4-214ENST00000589677 LINC00467Q9BRT7 94 aa10.99□□□□□ -0.65
SMARCA4-214ENST00000589677 SMAD5-AS1Q9Y6J3 95 aa10.99□□□□□ -0.65
SMARCA4-214ENST00000589677 SPAG11BQ08648 103 aa10.98□□□□□ -0.65
SMARCA4-214ENST00000589677 Q6ZS46 218 aa10.98□□□□□ -0.65
SMARCA4-214ENST00000589677 NACAE9PAV3 2078 aa10.98□□□□□ -0.65
SMARCA4-214ENST00000589677 BDP1A6H8Y1 2624 aa10.98□□□□□ -0.65
SMARCA4-214ENST00000589677 IGKV2D-24A0A075B6R9 120 aa10.98□□□□□ -0.65
SMARCA4-214ENST00000589677 ZFAND2AQ8N6M9 145 aa10.98□□□□□ -0.65
SMARCA4-214ENST00000589677 IGHV4OR15-8A0A075B7B6 117 aa10.98□□□□□ -0.65
SMARCA4-214ENST00000589677 A0A087WW49 117 aa10.98□□□□□ -0.65
SMARCA4-214ENST00000589677 SMIM26A0A096LP01 95 aa10.98□□□□□ -0.65
SMARCA4-214ENST00000589677 DEFB136Q30KP8 78 aa10.97□□□□□ -0.65
SMARCA4-214ENST00000589677 C1orf195Q5TG92 126 aa10.97□□□□□ -0.65
SMARCA4-214ENST00000589677 SEM1Q6ZVN7 128 aa10.97□□□□□ -0.65
SMARCA4-214ENST00000589677 ODF3BA8MYP8 253 aa10.97□□□□□ -0.65
SMARCA4-214ENST00000589677 CCL24O00175 119 aa10.97□□□□□ -0.65
SMARCA4-214ENST00000589677 NBASA2RRP1 2371 aa10.97□□□□□ -0.65
SMARCA4-214ENST00000589677 SPTSSBQ8NFR3 76 aa10.97□□□□□ -0.65
SMARCA4-214ENST00000589677 SIRPDQ9H106 197 aa10.97□□□□□ -0.65
SMARCA4-214ENST00000589677 PCNX2A6NKB5 2137 aa10.96□□□□□ -0.65
SMARCA4-214ENST00000589677 COL4A4P53420 1690 aaPredicted RBP10.96□□□□□ -0.65
SMARCA4-214ENST00000589677 SPTAN1Q13813 2472 aaKnown RBP10.96□□□□□ -0.65
SMARCA4-214ENST00000589677 GTF3C1Q12789 2109 aa10.96□□□□□ -0.65
SMARCA4-214ENST00000589677 SLPIP03973 132 aa10.96□□□□□ -0.66
SMARCA4-214ENST00000589677 ZFAND3Q9H8U3 227 aa10.96□□□□□ -0.66
SMARCA4-214ENST00000589677 KIAA1549LQ6ZVL6 1849 aa10.96□□□□□ -0.66
SMARCA4-214ENST00000589677 IGHV4-38-2P0DP08 117 aa10.96□□□□□ -0.66
SMARCA4-214ENST00000589677 ADAMTS9Q9P2N4 1935 aa10.95□□□□□ -0.66
SMARCA4-214ENST00000589677 WFDC11Q8NEX6 87 aa10.95□□□□□ -0.66
SMARCA4-214ENST00000589677 C20orf173Q96LM9 149 aa10.95□□□□□ -0.66
SMARCA4-214ENST00000589677 PRO3102Q9H379 93 aa10.95□□□□□ -0.66
SMARCA4-214ENST00000589677 IGF1P05019 195 aa10.94□□□□□ -0.66
SMARCA4-214ENST00000589677 POLR2KP53803 58 aaKnown RBP10.94□□□□□ -0.66
SMARCA4-214ENST00000589677 HRCT1Q6UXD1 115 aa10.94□□□□□ -0.66
SMARCA4-214ENST00000589677 ZFP36P26651 326 aaKnown RBP10.93□□□□□ -0.66
SMARCA4-214ENST00000589677 MAPK1IP1LQ8NDC0 245 aa10.93□□□□□ -0.66
SMARCA4-214ENST00000589677 SERP1Q9Y6X1 66 aa10.93□□□□□ -0.66
SMARCA4-214ENST00000589677 TMEM131Q92545 1883 aa10.93□□□□□ -0.66
SMARCA4-214ENST00000589677 TSHBP01222 138 aa10.92□□□□□ -0.66
SMARCA4-214ENST00000589677 GRNP28799 593 aaKnown RBP10.92□□□□□ -0.66
SMARCA4-214ENST00000589677 GAS8-AS1O95177 125 aa10.92□□□□□ -0.66
SMARCA4-214ENST00000589677 DAZAP2Q15038 168 aaPredicted RBP10.92□□□□□ -0.66
SMARCA4-214ENST00000589677 IGHV4-61A0A0C4DH41 118 aa10.91□□□□□ -0.66
SMARCA4-214ENST00000589677 FSTL3O95633 263 aa10.91□□□□□ -0.66
SMARCA4-214ENST00000589677 DYSFO75923 2080 aa10.91□□□□□ -0.66
SMARCA4-214ENST00000589677 ZGRF1Q86YA3 2104 aa10.91□□□□□ -0.66
SMARCA4-214ENST00000589677 C11orf21Q9P2W6 132 aa10.91□□□□□ -0.66
SMARCA4-214ENST00000589677 CLPSL1A2RUU4 121 aa10.9□□□□□ -0.66
SMARCA4-214ENST00000589677 FAM19A5Q7Z5A7 132 aaPredicted RBP10.9□□□□□ -0.66
SMARCA4-214ENST00000589677 SNURFQ9Y675 71 aa10.9□□□□□ -0.66
SMARCA4-214ENST00000589677 DSCAML1Q8TD84 2053 aa10.9□□□□□ -0.66
SMARCA4-214ENST00000589677 LY6LH3BQJ8 138 aa10.9□□□□□ -0.66
SMARCA4-214ENST00000589677 IGIPA6NJ69 53 aa10.9□□□□□ -0.66
SMARCA4-214ENST00000589677 EBI3Q14213 229 aa10.9□□□□□ -0.66
SMARCA4-214ENST00000589677 K7EQG2 157 aa10.89□□□□□ -0.67
SMARCA4-214ENST00000589677 SPART-AS1P0CW21 52 aa10.89□□□□□ -0.67
SMARCA4-214ENST00000589677 RNASE3P12724 160 aaKnown RBP10.89□□□□□ -0.67
SMARCA4-214ENST00000589677 NOTCH3Q9UM47 2321 aa10.89□□□□□ -0.67
SMARCA4-214ENST00000589677 HTTP42858 3142 aa10.89□□□□□ -0.67
SMARCA4-214ENST00000589677 PCNX3Q9H6A9 2034 aa10.89□□□□□ -0.67
SMARCA4-214ENST00000589677 A6NDX4 124 aa10.89□□□□□ -0.67
SMARCA4-214ENST00000589677 SCXQ7RTU7 201 aa10.88□□□□□ -0.67
SMARCA4-214ENST00000589677 FAM19A3Q7Z5A8 133 aa10.88□□□□□ -0.67
SMARCA4-214ENST00000589677 CDIP1Q9H305 208 aa10.88□□□□□ -0.67
SMARCA4-214ENST00000589677 TECTAO75443 2155 aa10.88□□□□□ -0.67
SMARCA4-214ENST00000589677 A0A096LNJ9 63 aa10.88□□□□□ -0.67
SMARCA4-214ENST00000589677 A0A1W2PNU3 283 aaPredicted RBP10.88□□□□□ -0.67
SMARCA4-214ENST00000589677 CRIP2P52943 208 aaPredicted RBP10.88□□□□□ -0.67
SMARCA4-214ENST00000589677 Q96MF0 132 aa10.88□□□□□ -0.67
SMARCA4-214ENST00000589677 FREM1Q5H8C1 2179 aa10.88□□□□□ -0.67
SMARCA4-214ENST00000589677 MAP6D1Q9H9H5 199 aa10.88□□□□□ -0.67
SMARCA4-214ENST00000589677 TRAV7A0A075B6U4 112 aa10.87□□□□□ -0.67
SMARCA4-214ENST00000589677 PRO0255Q9UI72 69 aa10.87□□□□□ -0.67
SMARCA4-214ENST00000589677 CSDC2Q9Y534 153 aaKnown RBP10.87□□□□□ -0.67
SMARCA4-214ENST00000589677 A8MZ25 164 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms