RNA–Protein interactions for RNA: ENST00000589638.1

TMED1-205, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 578 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-205ENST00000589638 PDZD11Q5EBL8 140 aa12.26□□□□□ -0.45
TMED1-205ENST00000589638 COA6Q5JTJ3 125 aaKnown RBP12.26□□□□□ -0.45
TMED1-205ENST00000589638 CEMP1Q6PRD7 247 aaPredicted RBP12.26□□□□□ -0.45
TMED1-205ENST00000589638 AMTP48728 403 aa12.25□□□□□ -0.45
TMED1-205ENST00000589638 SNRPEP62304 92 aaKnown RBP12.25□□□□□ -0.45
TMED1-205ENST00000589638 ZFAND6Q6FIF0 208 aa12.25□□□□□ -0.45
TMED1-205ENST00000589638 SH2D6Q7Z4S9 175 aa12.25□□□□□ -0.45
TMED1-205ENST00000589638 C15orf53Q8NAA6 179 aa12.25□□□□□ -0.45
TMED1-205ENST00000589638 GTSF1LQ9H1H1 148 aa12.25□□□□□ -0.45
TMED1-205ENST00000589638 NUPR2A6NF83 97 aa12.24□□□□□ -0.45
TMED1-205ENST00000589638 LINC01546A6NGU7 62 aa12.24□□□□□ -0.45
TMED1-205ENST00000589638 ORMDL2Q53FV1 153 aa12.24□□□□□ -0.45
TMED1-205ENST00000589638 NTM-AS1Q6ZSK4 140 aa12.24□□□□□ -0.45
TMED1-205ENST00000589638 FAM19A2Q8N3H0 131 aa12.24□□□□□ -0.45
TMED1-205ENST00000589638 BTF3P20290 206 aaKnown RBP12.23□□□□□ -0.45
TMED1-205ENST00000589638 IGHV1-24A0A0C4DH33 117 aa12.22□□□□□ -0.45
TMED1-205ENST00000589638 K7EMI3 77 aa12.22□□□□□ -0.45
TMED1-205ENST00000589638 TMEM97Q5BJF2 176 aa12.22□□□□□ -0.45
TMED1-205ENST00000589638 WWC2-AS2Q96NR7 200 aa12.22□□□□□ -0.45
TMED1-205ENST00000589638 CHCHD7Q9BUK0 85 aa12.22□□□□□ -0.45
TMED1-205ENST00000589638 KLK5Q9Y337 293 aaPredicted RBP12.22□□□□□ -0.45
TMED1-205ENST00000589638 TRBV25-1A0A075B6N4 114 aa12.21□□□□□ -0.45
TMED1-205ENST00000589638 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.21□□□□□ -0.45
TMED1-205ENST00000589638 TRBV6-8A0A0A6YYG3 113 aa12.21□□□□□ -0.45
TMED1-205ENST00000589638 IGKV2-29A2NJV5 120 aaPredicted RBP12.21□□□□□ -0.45
TMED1-205ENST00000589638 ESDP10768 282 aa12.21□□□□□ -0.45
TMED1-205ENST00000589638 LYPD5Q6UWN5 251 aa12.21□□□□□ -0.45
TMED1-205ENST00000589638 C5orf52A6NGY3 159 aa12.2□□□□□ -0.46
TMED1-205ENST00000589638 HBDP02042 147 aa12.2□□□□□ -0.46
TMED1-205ENST00000589638 HIST3H2BBQ8N257 126 aa12.2□□□□□ -0.46
TMED1-205ENST00000589638 MUC7Q8TAX7 377 aa12.2□□□□□ -0.46
TMED1-205ENST00000589638 TMEM243Q9BU79 118 aa12.2□□□□□ -0.46
TMED1-205ENST00000589638 A0A096LNJ9 63 aa12.19□□□□□ -0.46
TMED1-205ENST00000589638 RPL39P62891 51 aaKnown RBP12.19□□□□□ -0.46
TMED1-205ENST00000589638 ESRGQ1W209 222 aa12.19□□□□□ -0.46
TMED1-205ENST00000589638 C2orf66Q6UXQ4 117 aa12.19□□□□□ -0.46
TMED1-205ENST00000589638 C20orf203Q8NBC4 194 aa12.19□□□□□ -0.46
TMED1-205ENST00000589638 CHCHD5Q9BSY4 110 aa12.19□□□□□ -0.46
TMED1-205ENST00000589638 APLNQ9ULZ1 77 aa12.19□□□□□ -0.46
TMED1-205ENST00000589638 S100A2P29034 98 aa12.18□□□□□ -0.46
TMED1-205ENST00000589638 GAGE6Q13070 117 aa12.18□□□□□ -0.46
TMED1-205ENST00000589638 PLECQ15149 4684 aaKnown RBP12.18□□□□□ -0.46
TMED1-205ENST00000589638 LELP1Q5T871 98 aa12.18□□□□□ -0.46
TMED1-205ENST00000589638 CYSLTR1Q9Y271 337 aa12.18□□□□□ -0.46
TMED1-205ENST00000589638 UBE2L6O14933 153 aa12.17□□□□□ -0.46
TMED1-205ENST00000589638 FABP4P15090 132 aa12.17□□□□□ -0.46
TMED1-205ENST00000589638 STARD9Q9P2P6 4700 aa12.16□□□□□ -0.46
TMED1-205ENST00000589638 TIRAPP58753 221 aa12.16□□□□□ -0.46
TMED1-205ENST00000589638 TMEM18Q96B42 140 aa12.16□□□□□ -0.46
TMED1-205ENST00000589638 TOMM6Q96B49 74 aa12.16□□□□□ -0.46
TMED1-205ENST00000589638 TMEM262E9PQX1 116 aa12.15□□□□□ -0.46
TMED1-205ENST00000589638 G0S2P27469 103 aa12.15□□□□□ -0.46
TMED1-205ENST00000589638 TGP01266 2768 aa12.14□□□□□ -0.47
TMED1-205ENST00000589638 TRAV8-6A0A0B4J262 113 aa12.14□□□□□ -0.47
TMED1-205ENST00000589638 LEPROTL1O95214 131 aa12.14□□□□□ -0.47
TMED1-205ENST00000589638 LINC00173Q6ZV60 143 aa12.14□□□□□ -0.47
TMED1-205ENST00000589638 SCGB3A1Q96QR1 104 aa12.14□□□□□ -0.47
TMED1-205ENST00000589638 IFITM10A6NMD0 228 aa12.13□□□□□ -0.47
TMED1-205ENST00000589638 FGF6P10767 208 aa12.13□□□□□ -0.47
TMED1-205ENST00000589638 CCL18P55774 89 aa12.13□□□□□ -0.47
TMED1-205ENST00000589638 AMMECR1LQ6DCA0 310 aa12.13□□□□□ -0.47
TMED1-205ENST00000589638 HIST1H2BLQ99880 126 aa12.13□□□□□ -0.47
TMED1-205ENST00000589638 LINC00588Q9Y4M8 146 aa12.13□□□□□ -0.47
TMED1-205ENST00000589638 WFDC10BQ8IUB3 73 aa12.12□□□□□ -0.47
TMED1-205ENST00000589638 UBE2D4Q9Y2X8 147 aa12.12□□□□□ -0.47
TMED1-205ENST00000589638 TCTAP57738 103 aa12.11□□□□□ -0.47
TMED1-205ENST00000589638 OPRPNQ99935 248 aaPredicted RBP12.11□□□□□ -0.47
TMED1-205ENST00000589638 HSPB8Q9UJY1 196 aa12.11□□□□□ -0.47
TMED1-205ENST00000589638 CSMD3Q7Z407 3707 aa12.1□□□□□ -0.47
TMED1-205ENST00000589638 H7C423 109 aa12.1□□□□□ -0.47
TMED1-205ENST00000589638 DGAT2L7PQ6IED9 249 aa12.1□□□□□ -0.47
TMED1-205ENST00000589638 UBE2DNLQ8IWF7 75 aa12.1□□□□□ -0.47
TMED1-205ENST00000589638 Q8N3U1 123 aa12.1□□□□□ -0.47
TMED1-205ENST00000589638 SPANXA1Q9NS26 97 aa12.1□□□□□ -0.47
TMED1-205ENST00000589638 MRPS16Q9Y3D3 137 aaKnown RBP12.1□□□□□ -0.47
TMED1-205ENST00000589638 LINC01549A6NIU2 74 aa12.09□□□□□ -0.47
TMED1-205ENST00000589638 IGIPA6NJ69 53 aa12.09□□□□□ -0.47
TMED1-205ENST00000589638 ATP5LO75964 103 aa12.09□□□□□ -0.47
TMED1-205ENST00000589638 SMAGPQ0VAQ4 97 aa12.09□□□□□ -0.47
TMED1-205ENST00000589638 MPV17L2Q567V2 206 aa12.09□□□□□ -0.47
TMED1-205ENST00000589638 ERASQ7Z444 233 aa12.09□□□□□ -0.47
TMED1-205ENST00000589638 OR5A1Q8NGJ0 315 aa12.09□□□□□ -0.47
TMED1-205ENST00000589638 IFI27L1Q96BM0 104 aa12.09□□□□□ -0.47
TMED1-205ENST00000589638 TMEM101Q96IK0 257 aa12.09□□□□□ -0.47
TMED1-205ENST00000589638 A0A087WX48 190 aa12.08□□□□□ -0.48
TMED1-205ENST00000589638 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.08□□□□□ -0.48
TMED1-205ENST00000589638 RBX1P62877 108 aa12.08□□□□□ -0.48
TMED1-205ENST00000589638 RNASE13Q5GAN3 156 aaKnown RBP12.08□□□□□ -0.48
TMED1-205ENST00000589638 Q6ZUT4 128 aa12.08□□□□□ -0.48
TMED1-205ENST00000589638 MRPL52Q86TS9 123 aaKnown RBP12.08□□□□□ -0.48
TMED1-205ENST00000589638 Q8N976 141 aa12.08□□□□□ -0.48
TMED1-205ENST00000589638 TMEM141Q96I45 108 aa12.08□□□□□ -0.48
TMED1-205ENST00000589638 PACRGQ96M98 296 aaPredicted RBP12.08□□□□□ -0.48
TMED1-205ENST00000589638 TIMM17AQ99595 171 aa12.08□□□□□ -0.48
TMED1-205ENST00000589638 IGLV4-60A0A075B6I1 120 aa12.07□□□□□ -0.48
TMED1-205ENST00000589638 IGLV4-3A0A075B6K6 122 aa12.07□□□□□ -0.48
TMED1-205ENST00000589638 H0Y8G0 127 aa12.07□□□□□ -0.48
TMED1-205ENST00000589638 IGHV3-30P01768 117 aa12.07□□□□□ -0.48
TMED1-205ENST00000589638 IGHV3-33P01772 117 aa12.07□□□□□ -0.48
TMED1-205ENST00000589638 IGHV3-30-3P0DP02 117 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms